RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 ATP2C1P98194 919 aaPredicted RBP8.9□□□□□ -0.98
RFC1-207ENST00000504554 GRIN1Q05586 938 aa8.9□□□□□ -0.98
RFC1-207ENST00000504554 ODR4Q5SWX8 454 aa8.9□□□□□ -0.98
RFC1-207ENST00000504554 CATSPER4Q7RTX7 472 aa8.9□□□□□ -0.98
RFC1-207ENST00000504554 KLHL23Q8NBE8 558 aa8.9□□□□□ -0.98
RFC1-207ENST00000504554 RNF149Q8NC42 400 aa8.9□□□□□ -0.98
RFC1-207ENST00000504554 RNF169Q8NCN4 708 aa8.9□□□□□ -0.98
RFC1-207ENST00000504554 LRRC15Q8TF66 581 aa8.9□□□□□ -0.98
RFC1-207ENST00000504554 SAMD11Q96NU1 681 aa8.9□□□□□ -0.98
RFC1-207ENST00000504554 JPH2Q9BR39 696 aaPredicted RBP8.9□□□□□ -0.98
RFC1-207ENST00000504554 POLR3FQ9H1D9 316 aaPredicted RBP8.9□□□□□ -0.98
RFC1-207ENST00000504554 ELAC1Q9H777 363 aaKnown RBP8.9□□□□□ -0.98
RFC1-207ENST00000504554 ATP6V0A4Q9HBG4 840 aa8.9□□□□□ -0.98
RFC1-207ENST00000504554 LMCD1Q9NZU5 365 aa8.9□□□□□ -0.98
RFC1-207ENST00000504554 LRWD1Q9UFC0 647 aa8.9□□□□□ -0.98
RFC1-207ENST00000504554 DBR1Q9UK59 544 aaKnown RBP8.9□□□□□ -0.98
RFC1-207ENST00000504554 PLAGL2Q9UPG8 496 aa8.9□□□□□ -0.98
RFC1-207ENST00000504554 KIAA1024Q9UPX6 916 aa8.9□□□□□ -0.98
RFC1-207ENST00000504554 PIN4Q9Y237 131 aaKnown RBP8.9□□□□□ -0.98
RFC1-207ENST00000504554 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.9□□□□□ -0.98
RFC1-207ENST00000504554 PCDHGC5Q9Y5F6 944 aa8.9□□□□□ -0.98
RFC1-207ENST00000504554 PRRC2BQ5JSZ5 2229 aaKnown RBP8.89□□□□□ -0.99
RFC1-207ENST00000504554 CFAP99D6REC4 459 aa8.89□□□□□ -0.99
RFC1-207ENST00000504554 E9PMD0 336 aa8.89□□□□□ -0.99
RFC1-207ENST00000504554 B4GALT5O43286 388 aa8.89□□□□□ -0.99
RFC1-207ENST00000504554 B4GALT3O60512 393 aa8.89□□□□□ -0.99
RFC1-207ENST00000504554 TSPAN1O60635 241 aa8.89□□□□□ -0.99
RFC1-207ENST00000504554 EDN1P05305 212 aa8.89□□□□□ -0.99
RFC1-207ENST00000504554 XRCC6P12956 609 aaKnown RBP eCLIP8.89□□□□□ -0.99
RFC1-207ENST00000504554 ZSCAN20P17040 1043 aaPredicted RBP8.89□□□□□ -0.99
RFC1-207ENST00000504554 SFPQP23246 707 aaKnown RBP eCLIP8.89□□□□□ -0.99
RFC1-207ENST00000504554 GTF2F1P35269 517 aaKnown RBP eCLIP8.89□□□□□ -0.99
RFC1-207ENST00000504554 CCT6AP40227 531 aaKnown RBP8.89□□□□□ -0.99
RFC1-207ENST00000504554 AFF1P51825 1210 aaKnown RBP8.89□□□□□ -0.99
RFC1-207ENST00000504554 PTENP60484 403 aa8.89□□□□□ -0.99
RFC1-207ENST00000504554 CDC42EP1Q00587 391 aa8.89□□□□□ -0.99
RFC1-207ENST00000504554 MBTD1Q05BQ5 628 aa8.89□□□□□ -0.99
RFC1-207ENST00000504554 RESTQ13127 1097 aa8.89□□□□□ -0.99
RFC1-207ENST00000504554 PDIA5Q14554 519 aa8.89□□□□□ -0.99
RFC1-207ENST00000504554 RILPL1Q5EBL4 403 aa8.89□□□□□ -0.99
RFC1-207ENST00000504554 TCEAL5Q5H9L2 206 aa8.89□□□□□ -0.99
RFC1-207ENST00000504554 FAM173BQ6P4H8 233 aa8.89□□□□□ -0.99
RFC1-207ENST00000504554 SPPL3Q8TCT6 385 aa8.89□□□□□ -0.99
RFC1-207ENST00000504554 HELQQ8TDG4 1101 aa8.89□□□□□ -0.99
RFC1-207ENST00000504554 SNX29Q8TEQ0 813 aa8.89□□□□□ -0.99
RFC1-207ENST00000504554 TCP11Q8WWU5 503 aa8.89□□□□□ -0.99
RFC1-207ENST00000504554 MRPL38Q96DV4 380 aaKnown RBP8.89□□□□□ -0.99
RFC1-207ENST00000504554 CPB2Q96IY4 423 aa8.89□□□□□ -0.99
RFC1-207ENST00000504554 PNMA5Q96PV4 448 aa8.89□□□□□ -0.99
RFC1-207ENST00000504554 NACC1Q96RE7 527 aa8.89□□□□□ -0.99
RFC1-207ENST00000504554 EIF2AQ9BY44 585 aaKnown RBP8.89□□□□□ -0.99
RFC1-207ENST00000504554 CHST12Q9NRB3 414 aa8.89□□□□□ -0.99
RFC1-207ENST00000504554 AGPAT5Q9NUQ2 364 aa8.89□□□□□ -0.99
RFC1-207ENST00000504554 USP20Q9Y2K6 914 aa8.89□□□□□ -0.99
RFC1-207ENST00000504554 KIF3AQ9Y496 699 aa8.89□□□□□ -0.99
RFC1-207ENST00000504554 VPS37CA5D8V6 355 aaPredicted RBP8.88□□□□□ -0.99
RFC1-207ENST00000504554 DLL1O00548 723 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 ASAP2O43150 1006 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 GAS2O43903 313 aaKnown RBP8.88□□□□□ -0.99
RFC1-207ENST00000504554 OFD1O75665 1012 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 RB1P06400 928 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 CYP11B2P19099 503 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 SYT1P21579 422 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 PRPHP41219 470 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 KCNQ1P51787 676 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 TWF2Q6IBS0 349 aaKnown RBP8.88□□□□□ -0.99
RFC1-207ENST00000504554 DTHD1Q6ZMT9 781 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 AGMOQ6ZNB7 445 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 SRGAP1Q7Z6B7 1085 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 ADGRD2Q7Z7M1 963 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 CDR2LQ86X02 465 aaPredicted RBP8.88□□□□□ -0.99
RFC1-207ENST00000504554 EXOC8Q8IYI6 725 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 DAW1Q8N136 415 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 COLGALT1Q8NBJ5 622 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 SMG8Q8ND04 991 aaKnown RBP8.88□□□□□ -0.99
RFC1-207ENST00000504554 POF1BQ8WVV4 589 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 ASB2Q96Q27 587 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 C11orf84Q9BUA3 381 aaPredicted RBP8.88□□□□□ -0.99
RFC1-207ENST00000504554 KIFC3Q9BVG8 833 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 TRAIPQ9BWF2 469 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 TMEM117Q9H0C3 514 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 BHMT2Q9H2M3 363 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 FAM105AQ9NUU6 356 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 DDX19AQ9NUU7 478 aaKnown RBP8.88□□□□□ -0.99
RFC1-207ENST00000504554 THEGQ9P2T0 379 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 DACH1Q9UI36 760 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 MTMR6Q9Y217 621 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 CLIC4Q9Y696 253 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 ARID2Q68CP9 1835 aa8.88□□□□□ -0.99
RFC1-207ENST00000504554 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.87□□□□□ -0.99
RFC1-207ENST00000504554 ARHGEF35A5YM69 484 aa8.87□□□□□ -0.99
RFC1-207ENST00000504554 VWA3AA6NCI4 1184 aa8.87□□□□□ -0.99
RFC1-207ENST00000504554 INO80B-WBP1J3KQ70 363 aa8.87□□□□□ -0.99
RFC1-207ENST00000504554 K7ELQ4 463 aaPredicted RBP8.87□□□□□ -0.99
RFC1-207ENST00000504554 LAD1O00515 517 aa8.87□□□□□ -0.99
RFC1-207ENST00000504554 LINC01565O15544 149 aa8.87□□□□□ -0.99
RFC1-207ENST00000504554 EOMESO95936 686 aa8.87□□□□□ -0.99
RFC1-207ENST00000504554 AVPP01185 164 aa8.87□□□□□ -0.99
RFC1-207ENST00000504554 BMP1P13497 986 aa8.87□□□□□ -0.99
RFC1-207ENST00000504554 ARF4P18085 180 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms