RNA–Protein interactions for RNA: ENST00000504487.5

CCDC149-204, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC149, Length 3,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-204ENST00000504487 CBX6O95503 412 aa9.22□□□□□ -0.93
CCDC149-204ENST00000504487 TDP2O95551 362 aa9.22□□□□□ -0.93
CCDC149-204ENST00000504487 GSTA2P09210 222 aa9.22□□□□□ -0.93
CCDC149-204ENST00000504487 PLA2G4BP0C869 781 aa9.22□□□□□ -0.93
CCDC149-204ENST00000504487 DESP17661 470 aa9.22□□□□□ -0.93
CCDC149-204ENST00000504487 USP4Q13107 963 aa9.22□□□□□ -0.93
CCDC149-204ENST00000504487 PABPC4Q13310 644 aaKnown RBP eCLIP9.22□□□□□ -0.93
CCDC149-204ENST00000504487 NT5DC3Q86UY8 548 aa9.22□□□□□ -0.93
CCDC149-204ENST00000504487 EXOC3L1Q86VI1 746 aa9.22□□□□□ -0.93
CCDC149-204ENST00000504487 ST13P4Q8IZP2 240 aaPredicted RBP9.22□□□□□ -0.93
CCDC149-204ENST00000504487 ARHGAP18Q8N392 663 aa9.22□□□□□ -0.93
CCDC149-204ENST00000504487 GALNT15Q8N3T1 639 aa9.22□□□□□ -0.93
CCDC149-204ENST00000504487 ITFG2Q969R8 447 aa9.22□□□□□ -0.93
CCDC149-204ENST00000504487 COA7Q96BR5 231 aa9.22□□□□□ -0.93
CCDC149-204ENST00000504487 PIGSQ96S52 555 aa9.22□□□□□ -0.93
CCDC149-204ENST00000504487 BRIP1Q9BX63 1249 aa9.22□□□□□ -0.93
CCDC149-204ENST00000504487 MYLK2Q9H1R3 596 aa9.22□□□□□ -0.93
CCDC149-204ENST00000504487 DCP1AQ9NPI6 582 aaPredicted RBP9.22□□□□□ -0.93
CCDC149-204ENST00000504487 AIPL1Q9NZN9 384 aa9.22□□□□□ -0.93
CCDC149-204ENST00000504487 DDX25Q9UHL0 483 aaKnown RBP9.22□□□□□ -0.93
CCDC149-204ENST00000504487 DNAJC12Q9UKB3 198 aa9.22□□□□□ -0.93
CCDC149-204ENST00000504487 PPP1R9AQ9ULJ8 1098 aa9.22□□□□□ -0.93
CCDC149-204ENST00000504487 DNM3Q9UQ16 869 aa9.22□□□□□ -0.93
CCDC149-204ENST00000504487 LRCH1Q9Y2L9 728 aa9.22□□□□□ -0.93
CCDC149-204ENST00000504487 NUDT17P0C025 328 aa9.21□□□□□ -0.93
CCDC149-204ENST00000504487 NPR1P16066 1061 aa9.21□□□□□ -0.93
CCDC149-204ENST00000504487 RPL21P46778 160 aaKnown RBP9.21□□□□□ -0.93
CCDC149-204ENST00000504487 SH3BGRP55822 239 aaPredicted RBP9.21□□□□□ -0.93
CCDC149-204ENST00000504487 COG7P83436 770 aa9.21□□□□□ -0.93
CCDC149-204ENST00000504487 TRMT10CQ7L0Y3 403 aaKnown RBP9.21□□□□□ -0.93
CCDC149-204ENST00000504487 C1orf54Q8WWF1 131 aa9.21□□□□□ -0.93
CCDC149-204ENST00000504487 HIC2Q96JB3 615 aa9.21□□□□□ -0.93
CCDC149-204ENST00000504487 C9orf72Q96LT7 481 aa9.21□□□□□ -0.93
CCDC149-204ENST00000504487 MTFR1LQ9H019 292 aa9.21□□□□□ -0.93
CCDC149-204ENST00000504487 CHORDC1Q9UHD1 332 aaPredicted RBP9.21□□□□□ -0.93
CCDC149-204ENST00000504487 NPHP3-ACAD11A0A0J9YXS1 232 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 MAGEA13PA6NCF6 341 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 ARHGAP42A6NI28 874 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 MIF4GDA9UHW6 222 aaKnown RBP9.21□□□□□ -0.94
CCDC149-204ENST00000504487 HAUS5O94927 633 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 BCRP11274 1271 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 GRB10Q13322 594 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 ASTE1Q2TB18 679 aaPredicted RBP9.21□□□□□ -0.94
CCDC149-204ENST00000504487 CERKLQ49MI3 558 aaPredicted RBP9.21□□□□□ -0.94
CCDC149-204ENST00000504487 HP1BP3Q5SSJ5 553 aaPredicted RBP9.21□□□□□ -0.94
CCDC149-204ENST00000504487 ANO7Q6IWH7 933 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 IRGCQ6NXR0 463 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 TTC8Q8TAM2 541 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 MASTLQ96GX5 879 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 RMDN2Q96LZ7 410 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 TBC1D10AQ9BXI6 508 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 CDC42EP4Q9H3Q1 356 aaKnown RBP9.21□□□□□ -0.94
CCDC149-204ENST00000504487 PIDD1Q9HB75 910 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 NPHS2Q9NP85 383 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 UBN1Q9NPG3 1134 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 CNOT7Q9UIV1 285 aaKnown RBP9.21□□□□□ -0.94
CCDC149-204ENST00000504487 KDM3AQ9Y4C1 1321 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 CTNNA2P26232 953 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 DRAP1Q14919 205 aaPredicted RBP9.21□□□□□ -0.94
CCDC149-204ENST00000504487 NSMFQ6X4W1 530 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 LRRC55Q6ZSA7 311 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 LRP10Q7Z4F1 713 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 TTLL6Q8N841 843 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 C4orf32Q8N8J7 132 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 SYT2Q8N9I0 419 aaPredicted RBP9.21□□□□□ -0.94
CCDC149-204ENST00000504487 TBC1D16Q8TBP0 767 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 OPTNQ96CV9 577 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 FAM161BQ96MY7 647 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.21□□□□□ -0.94
CCDC149-204ENST00000504487 ARHGEF3Q9NR81 526 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 ATP8A2Q9NTI2 1148 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 CTNNAL1Q9UBT7 734 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 ANGPTL2Q9UKU9 493 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 PHTF1Q9UMS5 762 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 NR2E1Q9Y466 385 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 ALG6Q9Y672 507 aa9.21□□□□□ -0.94
CCDC149-204ENST00000504487 RBAK-RBAKDNI3L0D1 243 aa9.2□□□□□ -0.94
CCDC149-204ENST00000504487 MEIS1O00470 390 aa9.2□□□□□ -0.94
CCDC149-204ENST00000504487 ADAMTS3O15072 1205 aa9.2□□□□□ -0.94
CCDC149-204ENST00000504487 CDH16O75309 829 aa9.2□□□□□ -0.94
CCDC149-204ENST00000504487 TTLL1O95922 423 aa9.2□□□□□ -0.94
CCDC149-204ENST00000504487 SP100P23497 879 aaPredicted RBP9.2□□□□□ -0.94
CCDC149-204ENST00000504487 SF3B3Q15393 1217 aaKnown RBP9.2□□□□□ -0.94
CCDC149-204ENST00000504487 NPY5RQ15761 445 aa9.2□□□□□ -0.94
CCDC149-204ENST00000504487 GPR162Q16538 588 aa9.2□□□□□ -0.94
CCDC149-204ENST00000504487 PRAMEF18Q5VWM3 479 aa9.2□□□□□ -0.94
CCDC149-204ENST00000504487 ZNF746Q6NUN9 644 aaPredicted RBP9.2□□□□□ -0.94
CCDC149-204ENST00000504487 RNF207Q6ZRF8 634 aa9.2□□□□□ -0.94
CCDC149-204ENST00000504487 RHOT2Q8IXI1 618 aa9.2□□□□□ -0.94
CCDC149-204ENST00000504487 ZNF513Q8N8E2 541 aaPredicted RBP9.2□□□□□ -0.94
CCDC149-204ENST00000504487 SCG3Q8WXD2 468 aaKnown RBP9.2□□□□□ -0.94
CCDC149-204ENST00000504487 SERPINB12Q96P63 405 aa9.2□□□□□ -0.94
CCDC149-204ENST00000504487 EPAS1Q99814 870 aa9.2□□□□□ -0.94
CCDC149-204ENST00000504487 NKX1-2Q9UD57 310 aaPredicted RBP9.2□□□□□ -0.94
CCDC149-204ENST00000504487 SERPINB13Q9UIV8 391 aa9.2□□□□□ -0.94
CCDC149-204ENST00000504487 ZMYND8Q9ULU4 1186 aaPredicted RBP9.2□□□□□ -0.94
CCDC149-204ENST00000504487 MYH15Q9Y2K3 1946 aa9.2□□□□□ -0.94
CCDC149-204ENST00000504487 FAM47DPA6NHR8 397 aa9.2□□□□□ -0.94
CCDC149-204ENST00000504487 FOXO6A8MYZ6 492 aa9.2□□□□□ -0.94
CCDC149-204ENST00000504487 EXOC3O60645 756 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms