RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 KIF3AQ9Y496 699 aa24.44■■□□□ 1.5
LSM6-203ENST00000503982 HES2Q9Y543 173 aa24.44■■□□□ 1.5
LSM6-203ENST00000503982 HCFC2Q9Y5Z7 792 aa24.44■■□□□ 1.5
LSM6-203ENST00000503982 PRR33A8MZF0 331 aa24.43■■□□□ 1.5
LSM6-203ENST00000503982 NPTXRO95502 500 aa24.43■■□□□ 1.5
LSM6-203ENST00000503982 CTSAP10619 480 aa24.43■■□□□ 1.5
LSM6-203ENST00000503982 ARF4P18085 180 aaPredicted RBP24.43■■□□□ 1.5
LSM6-203ENST00000503982 SP100P23497 879 aaPredicted RBP24.43■■□□□ 1.5
LSM6-203ENST00000503982 CCT6AP40227 531 aaKnown RBP24.43■■□□□ 1.5
LSM6-203ENST00000503982 AFF1P51825 1210 aaKnown RBP24.43■■□□□ 1.5
LSM6-203ENST00000503982 GIT2Q14161 759 aa24.43■■□□□ 1.5
LSM6-203ENST00000503982 CBX2Q14781 532 aaPredicted RBP24.43■■□□□ 1.5
LSM6-203ENST00000503982 MCTP1Q6DN14 999 aa24.43■■□□□ 1.5
LSM6-203ENST00000503982 TMEM184AQ6ZMB5 413 aa24.43■■□□□ 1.5
LSM6-203ENST00000503982 CDR2LQ86X02 465 aaPredicted RBP24.43■■□□□ 1.5
LSM6-203ENST00000503982 IFNLR1Q8IU57 520 aaPredicted RBP24.43■■□□□ 1.5
LSM6-203ENST00000503982 SMG8Q8ND04 991 aaKnown RBP24.43■■□□□ 1.5
LSM6-203ENST00000503982 BCL7CQ8WUZ0 217 aaPredicted RBP24.43■■□□□ 1.5
LSM6-203ENST00000503982 TSHZ2Q9NRE2 1034 aa24.43■■□□□ 1.5
LSM6-203ENST00000503982 PARP2Q9UGN5 583 aa24.43■■□□□ 1.5
LSM6-203ENST00000503982 B4GALT5O43286 388 aa24.42■■□□□ 1.5
LSM6-203ENST00000503982 HOXB8P17481 243 aaPredicted RBP24.42■■□□□ 1.5
LSM6-203ENST00000503982 RPA1P27694 616 aa24.42■■□□□ 1.5
LSM6-203ENST00000503982 MLH1P40692 756 aa24.42■■□□□ 1.5
LSM6-203ENST00000503982 TRAPPC10P48553 1259 aa24.42■■□□□ 1.5
LSM6-203ENST00000503982 SYCE2Q6PIF2 218 aa24.42■■□□□ 1.5
LSM6-203ENST00000503982 FAM122AQ96E09 287 aa24.42■■□□□ 1.5
LSM6-203ENST00000503982 GAD1Q99259 594 aa24.42■■□□□ 1.5
LSM6-203ENST00000503982 TMEM175Q9BSA9 504 aa24.42■■□□□ 1.5
LSM6-203ENST00000503982 LRWD1Q9UFC0 647 aa24.42■■□□□ 1.5
LSM6-203ENST00000503982 NRP1O14786 923 aa24.41■■□□□ 1.5
LSM6-203ENST00000503982 NR1I2O75469 434 aa24.41■■□□□ 1.5
LSM6-203ENST00000503982 SCNN1GP51170 649 aa24.41■■□□□ 1.5
LSM6-203ENST00000503982 SLC27A1Q6PCB7 646 aa24.41■■□□□ 1.5
LSM6-203ENST00000503982 PADI6Q6TGC4 694 aa24.41■■□□□ 1.5
LSM6-203ENST00000503982 EMILIN2Q9BXX0 1053 aa24.41■■□□□ 1.5
LSM6-203ENST00000503982 RAB34Q9BZG1 259 aa24.41■■□□□ 1.5
LSM6-203ENST00000503982 RNF39Q9H2S5 420 aa24.41■■□□□ 1.5
LSM6-203ENST00000503982 PRMT7Q9NVM4 692 aaPredicted RBP24.41■■□□□ 1.5
LSM6-203ENST00000503982 STK39Q9UEW8 545 aa24.41■■□□□ 1.5
LSM6-203ENST00000503982 ARL5CA6NH57 179 aa24.4■■□□□ 1.5
LSM6-203ENST00000503982 LOC730098B7Z3J9 87 aa24.4■■□□□ 1.5
LSM6-203ENST00000503982 B4GALT3O60512 393 aa24.4■■□□□ 1.5
LSM6-203ENST00000503982 AKAP5P24588 427 aa24.4■■□□□ 1.5
LSM6-203ENST00000503982 KCNC3Q14003 757 aa24.4■■□□□ 1.5
LSM6-203ENST00000503982 AMHR2Q16671 573 aa24.4■■□□□ 1.5
LSM6-203ENST00000503982 RARS2Q5T160 578 aaKnown RBP24.4■■□□□ 1.5
LSM6-203ENST00000503982 ZBTB33Q86T24 672 aa24.4■■□□□ 1.5
LSM6-203ENST00000503982 DEPTORQ8TB45 409 aa24.4■■□□□ 1.5
LSM6-203ENST00000503982 NFKBIZQ9BYH8 718 aa24.4■■□□□ 1.5
LSM6-203ENST00000503982 C2orf40Q9H1Z8 148 aa24.4■■□□□ 1.5
LSM6-203ENST00000503982 S1PR5Q9H228 398 aa24.4■■□□□ 1.5
LSM6-203ENST00000503982 NXF3Q9H4D5 531 aaKnown RBP24.4■■□□□ 1.5
LSM6-203ENST00000503982 C2CD2LO14523 706 aa24.39■■□□□ 1.49
LSM6-203ENST00000503982 KLRC2P26717 231 aa24.39■■□□□ 1.49
LSM6-203ENST00000503982 HERC4Q5GLZ8 1057 aaPredicted RBP24.39■■□□□ 1.49
LSM6-203ENST00000503982 SNX29Q8TEQ0 813 aa24.39■■□□□ 1.49
LSM6-203ENST00000503982 SUSD6Q92537 303 aa24.39■■□□□ 1.49
LSM6-203ENST00000503982 ZFP42Q96MM3 310 aa24.39■■□□□ 1.49
LSM6-203ENST00000503982 RPS6KC1Q96S38 1066 aa24.39■■□□□ 1.49
LSM6-203ENST00000503982 MRPL17Q9NRX2 175 aaKnown RBP24.39■■□□□ 1.49
LSM6-203ENST00000503982 GIT1Q9Y2X7 761 aa24.39■■□□□ 1.49
LSM6-203ENST00000503982 EPCAMP16422 314 aa24.38■■□□□ 1.49
LSM6-203ENST00000503982 FXR2P51116 673 aaKnown RBP eCLIP24.38■■□□□ 1.49
LSM6-203ENST00000503982 PTGDRQ13258 359 aa24.38■■□□□ 1.49
LSM6-203ENST00000503982 CABP7Q86V35 215 aa24.38■■□□□ 1.49
LSM6-203ENST00000503982 PPFIBP1Q86W92 1011 aa24.38■■□□□ 1.49
LSM6-203ENST00000503982 C12orf76Q8N812 135 aaPredicted RBP24.38■■□□□ 1.49
LSM6-203ENST00000503982 IFT74Q96LB3 600 aa24.38■■□□□ 1.49
LSM6-203ENST00000503982 DZANK1Q9NVP4 752 aa24.38■■□□□ 1.49
LSM6-203ENST00000503982 KLK14Q9P0G3 267 aa24.38■■□□□ 1.49
LSM6-203ENST00000503982 KIAA1024Q9UPX6 916 aa24.38■■□□□ 1.49
LSM6-203ENST00000503982 PCDHB6Q9Y5E3 794 aa24.38■■□□□ 1.49
LSM6-203ENST00000503982 STK24Q9Y6E0 443 aa24.38■■□□□ 1.49
LSM6-203ENST00000503982 H3BQV1 296 aa24.37■■□□□ 1.49
LSM6-203ENST00000503982 PRKCBP05771 671 aa24.37■■□□□ 1.49
LSM6-203ENST00000503982 URODP06132 367 aa24.37■■□□□ 1.49
LSM6-203ENST00000503982 CYP11B2P19099 503 aa24.37■■□□□ 1.49
LSM6-203ENST00000503982 ITIH3Q06033 890 aa24.37■■□□□ 1.49
LSM6-203ENST00000503982 PPP2R5AQ15172 486 aa24.37■■□□□ 1.49
LSM6-203ENST00000503982 PTPN14Q15678 1187 aa24.37■■□□□ 1.49
LSM6-203ENST00000503982 MAPK6Q16659 721 aa24.37■■□□□ 1.49
LSM6-203ENST00000503982 PRIMPOLQ96LW4 560 aa24.37■■□□□ 1.49
LSM6-203ENST00000503982 RIPOR3Q96MK2 946 aa24.37■■□□□ 1.49
LSM6-203ENST00000503982 BHMT2Q9H2M3 363 aa24.37■■□□□ 1.49
LSM6-203ENST00000503982 POLD4Q9HCU8 107 aa24.37■■□□□ 1.49
LSM6-203ENST00000503982 DDX19AQ9NUU7 478 aaKnown RBP24.37■■□□□ 1.49
LSM6-203ENST00000503982 MIOSQ9NXC5 875 aa24.37■■□□□ 1.49
LSM6-203ENST00000503982 CDH22Q9UJ99 828 aa24.37■■□□□ 1.49
LSM6-203ENST00000503982 NR2E1Q9Y466 385 aa24.37■■□□□ 1.49
LSM6-203ENST00000503982 N4BP3O15049 544 aa24.36■■□□□ 1.49
LSM6-203ENST00000503982 WEE2P0C1S8 567 aa24.36■■□□□ 1.49
LSM6-203ENST00000503982 MUTP22033 750 aa24.36■■□□□ 1.49
LSM6-203ENST00000503982 U2AF2P26368 475 aaKnown RBP eCLIP24.36■■□□□ 1.49
LSM6-203ENST00000503982 MTHFRP42898 656 aa24.36■■□□□ 1.49
LSM6-203ENST00000503982 PRPF4BQ13523 1007 aaKnown RBP24.36■■□□□ 1.49
LSM6-203ENST00000503982 ZRSR1Q15695 479 aaKnown RBP24.36■■□□□ 1.49
LSM6-203ENST00000503982 KRT79Q5XKE5 535 aa24.36■■□□□ 1.49
LSM6-203ENST00000503982 COLGALT2Q8IYK4 626 aa24.36■■□□□ 1.49
LSM6-203ENST00000503982 NECTIN4Q96NY8 510 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms