RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 STK24Q9Y6E0 443 aa13.27□□□□□ -0.29
MED28-203ENST00000503945 CNTNAP2Q9UHC6 1331 aa13.27□□□□□ -0.29
MED28-203ENST00000503945 C2orf71A6NGG8 1288 aa13.26□□□□□ -0.29
MED28-203ENST00000503945 MED24O75448 989 aa13.26□□□□□ -0.29
MED28-203ENST00000503945 NR1I2O75469 434 aa13.26□□□□□ -0.29
MED28-203ENST00000503945 GLRA2P23416 452 aa13.26□□□□□ -0.29
MED28-203ENST00000503945 SIGLEC14Q08ET2 396 aa13.26□□□□□ -0.29
MED28-203ENST00000503945 UBXN11Q5T124 520 aa13.26□□□□□ -0.29
MED28-203ENST00000503945 ANKRD54Q6NXT1 300 aa13.26□□□□□ -0.29
MED28-203ENST00000503945 LLGL2Q6P1M3 1020 aa13.26□□□□□ -0.29
MED28-203ENST00000503945 SYCE2Q6PIF2 218 aa13.26□□□□□ -0.29
MED28-203ENST00000503945 ZNF280BQ86YH2 543 aa13.26□□□□□ -0.29
MED28-203ENST00000503945 IFNLR1Q8IU57 520 aaPredicted RBP13.26□□□□□ -0.29
MED28-203ENST00000503945 SUGP1Q8IWZ8 645 aaKnown RBP13.26□□□□□ -0.29
MED28-203ENST00000503945 HACE1Q8IYU2 909 aa13.26□□□□□ -0.29
MED28-203ENST00000503945 ASAP3Q8TDY4 903 aa13.26□□□□□ -0.29
MED28-203ENST00000503945 ASIC4Q96FT7 647 aa13.26□□□□□ -0.29
MED28-203ENST00000503945 NFKBIZQ9BYH8 718 aa13.26□□□□□ -0.29
MED28-203ENST00000503945 CSRNP2Q9H175 543 aa13.26□□□□□ -0.29
MED28-203ENST00000503945 POLR3FQ9H1D9 316 aaPredicted RBP13.26□□□□□ -0.29
MED28-203ENST00000503945 ZDBF2Q9HCK1 2354 aa13.25□□□□□ -0.29
MED28-203ENST00000503945 A0A1B0GUA9 196 aa13.25□□□□□ -0.29
MED28-203ENST00000503945 TSPAN1O60635 241 aa13.25□□□□□ -0.29
MED28-203ENST00000503945 USO1O60763 962 aaKnown RBP13.25□□□□□ -0.29
MED28-203ENST00000503945 POMCP01189 267 aa13.25□□□□□ -0.29
MED28-203ENST00000503945 MUTP22033 750 aa13.25□□□□□ -0.29
MED28-203ENST00000503945 U2AF2P26368 475 aaKnown RBP eCLIP13.25□□□□□ -0.29
MED28-203ENST00000503945 PTPN5P54829 565 aa13.25□□□□□ -0.29
MED28-203ENST00000503945 MBTD1Q05BQ5 628 aa13.25□□□□□ -0.29
MED28-203ENST00000503945 TPRNQ4KMQ1 711 aa13.25□□□□□ -0.29
MED28-203ENST00000503945 CES5AQ6NT32 575 aa13.25□□□□□ -0.29
MED28-203ENST00000503945 PADI6Q6TGC4 694 aa13.25□□□□□ -0.29
MED28-203ENST00000503945 SMG8Q8ND04 991 aaKnown RBP13.25□□□□□ -0.29
MED28-203ENST00000503945 CASP10Q92851 521 aa13.25□□□□□ -0.29
MED28-203ENST00000503945 CPB2Q96IY4 423 aa13.25□□□□□ -0.29
MED28-203ENST00000503945 PRRX2Q99811 253 aa13.25□□□□□ -0.29
MED28-203ENST00000503945 TMEM175Q9BSA9 504 aa13.25□□□□□ -0.29
MED28-203ENST00000503945 RAB34Q9BZG1 259 aa13.25□□□□□ -0.29
MED28-203ENST00000503945 DNAJB4Q9UDY4 337 aa13.25□□□□□ -0.29
MED28-203ENST00000503945 LRWD1Q9UFC0 647 aa13.25□□□□□ -0.29
MED28-203ENST00000503945 IPPQ9Y573 584 aa13.25□□□□□ -0.29
MED28-203ENST00000503945 ARHGEF35A5YM69 484 aa13.24□□□□□ -0.29
MED28-203ENST00000503945 LRRIQ4A6NIV6 560 aa13.24□□□□□ -0.29
MED28-203ENST00000503945 CLASP2O75122 1294 aaKnown RBP13.24□□□□□ -0.29
MED28-203ENST00000503945 DDHD2O94830 711 aa13.24□□□□□ -0.29
MED28-203ENST00000503945 CTSAP10619 480 aa13.24□□□□□ -0.29
MED28-203ENST00000503945 ARF4P18085 180 aaPredicted RBP13.24□□□□□ -0.29
MED28-203ENST00000503945 CYP11B2P19099 503 aa13.24□□□□□ -0.29
MED28-203ENST00000503945 AVPR2P30518 371 aa13.24□□□□□ -0.29
MED28-203ENST00000503945 CCT6AP40227 531 aaKnown RBP13.24□□□□□ -0.29
MED28-203ENST00000503945 SLC11A1P49279 550 aa13.24□□□□□ -0.29
MED28-203ENST00000503945 FXR2P51116 673 aaKnown RBP eCLIP13.24□□□□□ -0.29
MED28-203ENST00000503945 AFF1P51825 1210 aaKnown RBP13.24□□□□□ -0.29
MED28-203ENST00000503945 VCPP55072 806 aaKnown RBP13.24□□□□□ -0.29
MED28-203ENST00000503945 PTGDRQ13258 359 aa13.24□□□□□ -0.29
MED28-203ENST00000503945 CAPSQ13938 189 aa13.24□□□□□ -0.29
MED28-203ENST00000503945 HAUS3Q68CZ6 603 aa13.24□□□□□ -0.29
MED28-203ENST00000503945 MCTP1Q6DN14 999 aa13.24□□□□□ -0.29
MED28-203ENST00000503945 ZBTB8OSQ8IWT0 167 aa13.24□□□□□ -0.29
MED28-203ENST00000503945 C4orf32Q8N8J7 132 aa13.24□□□□□ -0.29
MED28-203ENST00000503945 GAD1Q99259 594 aa13.24□□□□□ -0.29
MED28-203ENST00000503945 EIF2AQ9BY44 585 aaKnown RBP13.24□□□□□ -0.29
MED28-203ENST00000503945 RNF39Q9H2S5 420 aa13.24□□□□□ -0.29
MED28-203ENST00000503945 GIT1Q9Y2X7 761 aa13.24□□□□□ -0.29
MED28-203ENST00000503945 IRAK3Q9Y616 596 aa13.24□□□□□ -0.29
MED28-203ENST00000503945 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.23□□□□□ -0.29
MED28-203ENST00000503945 ARL5CA6NH57 179 aa13.23□□□□□ -0.29
MED28-203ENST00000503945 LAD1O00515 517 aa13.23□□□□□ -0.29
MED28-203ENST00000503945 NRP1O14786 923 aa13.23□□□□□ -0.29
MED28-203ENST00000503945 SP100P23497 879 aaPredicted RBP13.23□□□□□ -0.29
MED28-203ENST00000503945 MCM2P49736 904 aa13.23□□□□□ -0.29
MED28-203ENST00000503945 ITIH3Q06033 890 aa13.23□□□□□ -0.29
MED28-203ENST00000503945 PTPN21Q16825 1174 aa13.23□□□□□ -0.29
MED28-203ENST00000503945 TMEM132AQ24JP5 1023 aa13.23□□□□□ -0.29
MED28-203ENST00000503945 SLC27A1Q6PCB7 646 aa13.23□□□□□ -0.29
MED28-203ENST00000503945 PPFIBP1Q86W92 1011 aa13.23□□□□□ -0.29
MED28-203ENST00000503945 IFT74Q96LB3 600 aa13.23□□□□□ -0.29
MED28-203ENST00000503945 PRIMPOLQ96LW4 560 aa13.23□□□□□ -0.29
MED28-203ENST00000503945 COLEC11Q9BWP8 271 aa13.23□□□□□ -0.29
MED28-203ENST00000503945 APOL6Q9BWW8 343 aa13.23□□□□□ -0.29
MED28-203ENST00000503945 EMILIN2Q9BXX0 1053 aa13.23□□□□□ -0.29
MED28-203ENST00000503945 C2orf40Q9H1Z8 148 aa13.23□□□□□ -0.29
MED28-203ENST00000503945 ADAM7Q9H2U9 754 aa13.23□□□□□ -0.29
MED28-203ENST00000503945 GPRC5CQ9NQ84 441 aa13.23□□□□□ -0.29
MED28-203ENST00000503945 PRMT7Q9NVM4 692 aaPredicted RBP13.23□□□□□ -0.29
MED28-203ENST00000503945 DAXXQ9UER7 740 aaPredicted RBP13.23□□□□□ -0.29
MED28-203ENST00000503945 PARP2Q9UGN5 583 aa13.23□□□□□ -0.29
MED28-203ENST00000503945 CDH22Q9UJ99 828 aa13.23□□□□□ -0.29
MED28-203ENST00000503945 KIAA1024Q9UPX6 916 aa13.23□□□□□ -0.29
MED28-203ENST00000503945 DNM3Q9UQ16 869 aa13.23□□□□□ -0.29
MED28-203ENST00000503945 SSX2IPQ9Y2D8 614 aa13.23□□□□□ -0.29
MED28-203ENST00000503945 HES2Q9Y543 173 aa13.23□□□□□ -0.29
MED28-203ENST00000503945 HCFC2Q9Y5Z7 792 aa13.23□□□□□ -0.29
MED28-203ENST00000503945 H3BQV1 296 aa13.22□□□□□ -0.29
MED28-203ENST00000503945 PDGFBP01127 241 aaPredicted RBP13.22□□□□□ -0.29
MED28-203ENST00000503945 KLRC2P26717 231 aa13.22□□□□□ -0.29
MED28-203ENST00000503945 OR1G1P47890 313 aa13.22□□□□□ -0.29
MED28-203ENST00000503945 TOB1P50616 345 aaPredicted RBP13.22□□□□□ -0.29
MED28-203ENST00000503945 PPP2R5AQ15172 486 aa13.22□□□□□ -0.29
MED28-203ENST00000503945 MAPK6Q16659 721 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms