RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 LRCH2Q5VUJ6 765 aa17.68■□□□□ 0.42
DDR1-250ENST00000503628 DCLRE1AQ6PJP8 1040 aa17.68■□□□□ 0.42
DDR1-250ENST00000503628 POTEGQ6S5H5 508 aa17.68■□□□□ 0.42
DDR1-250ENST00000503628 MRPL10Q7Z7H8 261 aaKnown RBP17.68■□□□□ 0.42
DDR1-250ENST00000503628 SUMF1Q8NBK3 374 aa17.68■□□□□ 0.42
DDR1-250ENST00000503628 ST13P5Q8NFI4 369 aaPredicted RBP17.68■□□□□ 0.42
DDR1-250ENST00000503628 SLC5A5Q92911 643 aa17.68■□□□□ 0.42
DDR1-250ENST00000503628 ZNF707Q96C28 371 aaPredicted RBP17.68■□□□□ 0.42
DDR1-250ENST00000503628 NLRP4Q96MN2 994 aa17.68■□□□□ 0.42
DDR1-250ENST00000503628 HERC2P3Q9BVR0 1158 aa17.68■□□□□ 0.42
DDR1-250ENST00000503628 TEKT3Q9BXF9 490 aa17.68■□□□□ 0.42
DDR1-250ENST00000503628 FOXQ1Q9C009 403 aa17.68■□□□□ 0.42
DDR1-250ENST00000503628 NCOA5Q9HCD5 579 aaKnown RBP17.68■□□□□ 0.42
DDR1-250ENST00000503628 KANSL3Q9P2N6 904 aa17.68■□□□□ 0.42
DDR1-250ENST00000503628 DPP7Q9UHL4 492 aa17.68■□□□□ 0.42
DDR1-250ENST00000503628 SSX2IPQ9Y2D8 614 aa17.68■□□□□ 0.42
DDR1-250ENST00000503628 PRG3Q9Y2Y8 225 aaPredicted RBP17.68■□□□□ 0.42
DDR1-250ENST00000503628 TPRP12270 2363 aaKnown RBP17.67■□□□□ 0.42
DDR1-250ENST00000503628 KMT2BQ9UMN6 2715 aaPredicted RBP17.67■□□□□ 0.42
DDR1-250ENST00000503628 LRRN2O75325 713 aa17.67■□□□□ 0.42
DDR1-250ENST00000503628 GNA11P29992 359 aa17.67■□□□□ 0.42
DDR1-250ENST00000503628 STK3Q13188 491 aa17.67■□□□□ 0.42
DDR1-250ENST00000503628 RABEP1Q15276 862 aa17.67■□□□□ 0.42
DDR1-250ENST00000503628 KIAA0319Q5VV43 1072 aa17.67■□□□□ 0.42
DDR1-250ENST00000503628 ELMSAN1Q6PJG2 1045 aa17.67■□□□□ 0.42
DDR1-250ENST00000503628 MIER3Q7Z3K6 550 aa17.67■□□□□ 0.42
DDR1-250ENST00000503628 MAML2Q8IZL2 1156 aaPredicted RBP17.67■□□□□ 0.42
DDR1-250ENST00000503628 CCDC12Q8WUD4 166 aaPredicted RBP17.67■□□□□ 0.42
DDR1-250ENST00000503628 PIDD1Q9HB75 910 aa17.67■□□□□ 0.42
DDR1-250ENST00000503628 IFT122Q9HBG6 1241 aa17.67■□□□□ 0.42
DDR1-250ENST00000503628 AGPAT5Q9NUQ2 364 aa17.67■□□□□ 0.42
DDR1-250ENST00000503628 MARCH5Q9NX47 278 aa17.67■□□□□ 0.42
DDR1-250ENST00000503628 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.67■□□□□ 0.429e-7■■■■□ 21.1
DDR1-250ENST00000503628 DOCK6Q96HP0 2047 aa17.67■□□□□ 0.42
DDR1-250ENST00000503628 GPR179Q6PRD1 2367 aa17.66■□□□□ 0.42
DDR1-250ENST00000503628 DDX11L8A8MPP1 907 aa17.66■□□□□ 0.42
DDR1-250ENST00000503628 ANHXE9PGG2 379 aa17.66■□□□□ 0.42
DDR1-250ENST00000503628 MAFO75444 373 aaPredicted RBP17.66■□□□□ 0.42
DDR1-250ENST00000503628 NTRK3Q16288 839 aa17.66■□□□□ 0.42
DDR1-250ENST00000503628 PALB2Q86YC2 1186 aa17.66■□□□□ 0.42
DDR1-250ENST00000503628 PJA1Q8NG27 643 aa17.66■□□□□ 0.42
DDR1-250ENST00000503628 NT5C3AQ9H0P0 336 aa17.66■□□□□ 0.42
DDR1-250ENST00000503628 SLKQ9H2G2 1235 aaPredicted RBP17.66■□□□□ 0.42
DDR1-250ENST00000503628 RXFP1Q9HBX9 757 aa17.66■□□□□ 0.42
DDR1-250ENST00000503628 SLC2A4RGQ9NR83 387 aa17.66■□□□□ 0.42
DDR1-250ENST00000503628 MIA3Q5JRA6 1907 aa17.65■□□□□ 0.42
DDR1-250ENST00000503628 GAS2O43903 313 aaKnown RBP17.65■□□□□ 0.42
DDR1-250ENST00000503628 PFKFB2O60825 505 aa17.65■□□□□ 0.42
DDR1-250ENST00000503628 KINO60870 393 aaKnown RBP17.65■□□□□ 0.42
DDR1-250ENST00000503628 PSMD10O75832 226 aa17.65■□□□□ 0.42
DDR1-250ENST00000503628 IFNAR1P17181 557 aa17.65■□□□□ 0.42
DDR1-250ENST00000503628 OR1G1P47890 313 aa17.65■□□□□ 0.42
DDR1-250ENST00000503628 GLUD2P49448 558 aa17.65■□□□□ 0.42
DDR1-250ENST00000503628 HTR4Q13639 388 aa17.65■□□□□ 0.42
DDR1-250ENST00000503628 UBXN11Q5T124 520 aa17.65■□□□□ 0.42
DDR1-250ENST00000503628 GET4Q7L5D6 327 aaPredicted RBP17.65■□□□□ 0.42
DDR1-250ENST00000503628 COLGALT2Q8IYK4 626 aa17.65■□□□□ 0.42
DDR1-250ENST00000503628 RDM1Q8NG50 284 aa17.65■□□□□ 0.42
DDR1-250ENST00000503628 HDAC7Q8WUI4 952 aa17.65■□□□□ 0.42
DDR1-250ENST00000503628 RPP25Q9BUL9 199 aaKnown RBP17.65■□□□□ 0.42
DDR1-250ENST00000503628 NUMBLQ9Y6R0 609 aa17.65■□□□□ 0.42
DDR1-250ENST00000503628 CNTNAP2Q9UHC6 1331 aa17.65■□□□□ 0.42
DDR1-250ENST00000503628 SPTBN2O15020 2390 aa17.64■□□□□ 0.41
DDR1-250ENST00000503628 CPLX1O14810 134 aa17.64■□□□□ 0.41
DDR1-250ENST00000503628 PRPF3O43395 683 aaKnown RBP17.64■□□□□ 0.41
DDR1-250ENST00000503628 PAPLNO95428 1278 aa17.64■□□□□ 0.41
DDR1-250ENST00000503628 EFEMP2O95967 443 aa17.64■□□□□ 0.41
DDR1-250ENST00000503628 HOXA11P31270 313 aaPredicted RBP17.64■□□□□ 0.41
DDR1-250ENST00000503628 USP11P51784 963 aa17.64■□□□□ 0.41
DDR1-250ENST00000503628 STARD6P59095 220 aa17.64■□□□□ 0.41
DDR1-250ENST00000503628 SCRN1Q12765 414 aa17.64■□□□□ 0.41
DDR1-250ENST00000503628 RNF168Q8IYW5 571 aaPredicted RBP17.64■□□□□ 0.41
DDR1-250ENST00000503628 BICD2Q8TD16 824 aa17.64■□□□□ 0.41
DDR1-250ENST00000503628 PHKBQ93100 1093 aa17.64■□□□□ 0.41
DDR1-250ENST00000503628 RNF26Q9BY78 433 aaPredicted RBP17.64■□□□□ 0.41
DDR1-250ENST00000503628 PLEKHA4Q9H4M7 779 aa17.64■□□□□ 0.41
DDR1-250ENST00000503628 MINDY3Q9H8M7 445 aa17.64■□□□□ 0.41
DDR1-250ENST00000503628 MYH15Q9Y2K3 1946 aa17.64■□□□□ 0.41
DDR1-250ENST00000503628 F8W810 466 aa17.63■□□□□ 0.41
DDR1-250ENST00000503628 LARGE1O95461 756 aa17.63■□□□□ 0.41
DDR1-250ENST00000503628 SRGAP2CP0DJJ0 459 aa17.63■□□□□ 0.41
DDR1-250ENST00000503628 NCLP19338 710 aaKnown RBP17.63■□□□□ 0.41
DDR1-250ENST00000503628 GPC5P78333 572 aa17.63■□□□□ 0.41
DDR1-250ENST00000503628 AKAP17AQ02040 695 aaKnown RBP17.63■□□□□ 0.41
DDR1-250ENST00000503628 DSG1Q02413 1049 aa17.63■□□□□ 0.41
DDR1-250ENST00000503628 ME3Q16798 604 aa17.63■□□□□ 0.41
DDR1-250ENST00000503628 VARS2Q5ST30 1063 aaKnown RBP17.63■□□□□ 0.41
DDR1-250ENST00000503628 PLA2G4FQ68DD2 849 aa17.63■□□□□ 0.41
DDR1-250ENST00000503628 CPLX2Q6PUV4 134 aaKnown RBP17.63■□□□□ 0.41
DDR1-250ENST00000503628 B3GNT9Q6UX72 402 aa17.63■□□□□ 0.41
DDR1-250ENST00000503628 ANO5Q75V66 913 aa17.63■□□□□ 0.41
DDR1-250ENST00000503628 GLYCTKQ8IVS8 523 aa17.63■□□□□ 0.41
DDR1-250ENST00000503628 SHDQ96IW2 340 aa17.63■□□□□ 0.41
DDR1-250ENST00000503628 B3GALT6Q96L58 329 aa17.63■□□□□ 0.41
DDR1-250ENST00000503628 PRKD2Q9BZL6 878 aa17.63■□□□□ 0.41
DDR1-250ENST00000503628 ZDHHC7Q9NXF8 308 aa17.63■□□□□ 0.41
DDR1-250ENST00000503628 LIMCH1Q9UPQ0 1083 aa17.63■□□□□ 0.41
DDR1-250ENST00000503628 COL4A3BPQ9Y5P4 624 aa17.63■□□□□ 0.41
DDR1-250ENST00000503628 TDRD15B5MCY1 1934 aaKnown RBP17.62■□□□□ 0.41
DDR1-250ENST00000503628 COL4A3Q01955 1670 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms