RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 ZNF568Q3ZCX4 644 aa17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 C11orf70Q9BRQ4 267 aa17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 MAP2P11137 1827 aaKnown RBP17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 PDXKO00764 312 aa17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 GYG2O15488 501 aa17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 MYL3P08590 195 aa17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 ARL13BQ3SXY8 428 aa17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 TMEM270Q6UE05 265 aa17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 ENOSF1Q7L5Y1 443 aa17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 PRPF31Q8WWY3 499 aaKnown RBP17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 ANKRD7Q92527 254 aa17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 ATP6V1E2Q96A05 226 aa17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 CHMP6Q96FZ7 201 aa17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 ASNSD1Q9NWL6 643 aa17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 SLC9A2Q9UBY0 812 aa17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 ARHGEF28Q8N1W1 1705 aaKnown RBP17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 HSPA8P11142 646 aaKnown RBP17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 ANXA13P27216 316 aa17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 IRX2Q9BZI1 471 aaPredicted RBP17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 TSPYL2Q9H2G4 693 aaPredicted RBP17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 SSU72P8A0A1W2PR75 194 aa17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 BRAFP15056 766 aa17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 GLYCTKQ8IVS8 523 aa17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 FAM213AQ9BRX8 229 aa17.21■□□□□ 0.35
HMGXB3-202ENST00000503427 RHOBTB3O94955 611 aa17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 ZNF18P17022 549 aa17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 CDO1Q16878 200 aa17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 CCDC137Q6PK04 289 aaKnown RBP17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 CHP1Q99653 195 aa17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 FBXL5Q9UKA1 691 aa17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 STMN1P16949 149 aa17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 PPARGC1AQ9UBK2 798 aaKnown RBP17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 STXBP3O00186 592 aa17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 KIAA1841Q6NSI8 718 aa17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 DSTYKQ6XUX3 929 aa17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 TRIM59Q8IWR1 403 aa17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 ZNF280CQ8ND82 737 aa17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 LRRC1Q9BTT6 524 aa17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 MRPL4Q9BYD3 311 aaKnown RBP17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 POLR3FQ9H1D9 316 aaPredicted RBP17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 ZBTB24O43167 697 aaPredicted RBP17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 NFX1Q12986 1120 aaKnown RBP17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 TTC39CQ8N584 583 aa17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 C7orf25Q9BPX7 421 aa17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 PRR12Q9ULL5 1215 aa17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 CNTNAP5Q8WYK1 1306 aa17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 ZNF394Q53GI3 561 aa17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 TRIM72Q6ZMU5 477 aa17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 TC2NQ8N9U0 490 aa17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 AGBL3Q8NEM8 1001 aa17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 SNF8Q96H20 258 aa17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 IP6K2Q9UHH9 426 aa17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 ZFP69BQ9UJL9 534 aa17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 MAGED2Q9UNF1 606 aaPredicted RBP17.2■□□□□ 0.34
HMGXB3-202ENST00000503427 ESYT2A0FGR8 921 aa17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 RGL2O15211 777 aa17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 MDM2Q00987 491 aaPredicted RBP17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 SLC15A2Q16348 729 aa17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 SLC18A3Q16572 532 aa17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 ZNF699Q32M78 642 aa17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 RHOT1Q8IXI2 618 aa17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 KCTD17Q8N5Z5 321 aa17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 JPH1Q9HDC5 661 aaPredicted RBP17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 HSPA4LO95757 839 aa17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 KRT80Q6KB66 452 aa17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 C4orf50Q6ZRC1 276 aa17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 OR6B3Q8NGW1 331 aa17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 CYP26B1Q9NR63 512 aa17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 PSMD14O00487 310 aa17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 KIAA0391O15091 583 aaKnown RBP17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 AP3M2P53677 418 aa17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 TAF1BQ53T94 588 aaPredicted RBP17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 HAUS6Q7Z4H7 955 aa17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 PASD1Q8IV76 773 aa17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 SKA2Q8WVK7 121 aaPredicted RBP17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 DHX38Q92620 1227 aaKnown RBP17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 KCNB2Q92953 911 aa17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 RNF25Q96BH1 459 aaPredicted RBP17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 SPATA33Q96N06 139 aa17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 LRRC37BQ96QE4 947 aa17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 CPSF3Q9UKF6 684 aaKnown RBP17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 SPAG7O75391 227 aa17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 MX2P20592 715 aa17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 CASP2P42575 452 aa17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 FXR1P51114 621 aaKnown RBP eCLIP17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 GPC3P51654 580 aa17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 PPP6R3Q5H9R7 873 aaPredicted RBP17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 KLC3Q6P597 504 aa17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 ELOA2Q8IYF1 753 aaPredicted RBP17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 STOML1Q9UBI4 398 aa17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 INTUQ9ULD6 942 aa17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 APOBEC2Q9Y235 224 aaKnown RBP17.19■□□□□ 0.34
HMGXB3-202ENST00000503427 SLC16A3O15427 465 aaKnown RBP17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 CFLARO15519 480 aa17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 EFNA5P52803 228 aa17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 THOC1Q96FV9 657 aaKnown RBP17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 IL25Q9H293 177 aa17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 KCND2Q9NZV8 630 aa17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 FIS1Q9Y3D6 152 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms