RNA–Protein interactions for RNA: ENST00000503123.5

RNF4-203, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-203ENST00000503123 ITGA4P13612 1032 aa9.68□□□□□ -0.86
RNF4-203ENST00000503123 PLCG1P19174 1290 aa9.68□□□□□ -0.86
RNF4-203ENST00000503123 DNAJB1P25685 340 aa9.68□□□□□ -0.86
RNF4-203ENST00000503123 TXLNAP40222 546 aa9.68□□□□□ -0.86
RNF4-203ENST00000503123 NPTX2P47972 431 aa9.68□□□□□ -0.86
RNF4-203ENST00000503123 BCAR1P56945 870 aa9.68□□□□□ -0.86
RNF4-203ENST00000503123 KRT17Q04695 432 aa9.68□□□□□ -0.86
RNF4-203ENST00000503123 GRIN1Q05586 938 aa9.68□□□□□ -0.86
RNF4-203ENST00000503123 PRPF4BQ13523 1007 aaKnown RBP9.68□□□□□ -0.86
RNF4-203ENST00000503123 ZRSR1Q15695 479 aaKnown RBP9.68□□□□□ -0.86
RNF4-203ENST00000503123 TCEAL5Q5H9L2 206 aa9.68□□□□□ -0.86
RNF4-203ENST00000503123 APBB1IPQ7Z5R6 666 aaPredicted RBP9.68□□□□□ -0.86
RNF4-203ENST00000503123 SLC39A11Q8N1S5 342 aa9.68□□□□□ -0.86
RNF4-203ENST00000503123 POF1BQ8WVV4 589 aa9.68□□□□□ -0.86
RNF4-203ENST00000503123 MRPS27Q92552 414 aaKnown RBP9.68□□□□□ -0.86
RNF4-203ENST00000503123 LPPQ93052 612 aa9.68□□□□□ -0.86
RNF4-203ENST00000503123 PABPC5Q96DU9 382 aaKnown RBP9.68□□□□□ -0.86
RNF4-203ENST00000503123 CPB2Q96IY4 423 aa9.68□□□□□ -0.86
RNF4-203ENST00000503123 ZNF396Q96N95 335 aaPredicted RBP9.68□□□□□ -0.86
RNF4-203ENST00000503123 ASB2Q96Q27 587 aa9.68□□□□□ -0.86
RNF4-203ENST00000503123 USP28Q96RU2 1077 aa9.68□□□□□ -0.86
RNF4-203ENST00000503123 ADPGKQ9BRR6 497 aa9.68□□□□□ -0.86
RNF4-203ENST00000503123 EIF2AQ9BY44 585 aaKnown RBP9.68□□□□□ -0.86
RNF4-203ENST00000503123 TRIM6Q9C030 488 aaPredicted RBP9.68□□□□□ -0.86
RNF4-203ENST00000503123 PRDM6Q9NQX0 595 aa9.68□□□□□ -0.86
RNF4-203ENST00000503123 TLR9Q9NR96 1032 aa9.68□□□□□ -0.86
RNF4-203ENST00000503123 FOXD4L1Q9NU39 408 aa9.68□□□□□ -0.86
RNF4-203ENST00000503123 LARSQ9P2J5 1176 aaKnown RBP9.68□□□□□ -0.86
RNF4-203ENST00000503123 HCSTQ9UBK5 93 aa9.68□□□□□ -0.86
RNF4-203ENST00000503123 STK17AQ9UEE5 414 aa9.68□□□□□ -0.86
RNF4-203ENST00000503123 PUF60Q9UHX1 559 aaKnown RBP9.68□□□□□ -0.86
RNF4-203ENST00000503123 GIT1Q9Y2X7 761 aa9.68□□□□□ -0.86
RNF4-203ENST00000503123 DOCK6Q96HP0 2047 aa9.68□□□□□ -0.86
RNF4-203ENST00000503123 ARL5CA6NH57 179 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 K7ERI5 159 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 FSCN2O14926 492 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 ZC3H11AO75152 810 aaKnown RBP eCLIP9.67□□□□□ -0.86
RNF4-203ENST00000503123 PPP6R2O75170 966 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 YEATS4O95619 227 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 PLS3P13797 630 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 MARCKSP29966 332 aaPredicted RBP9.67□□□□□ -0.86
RNF4-203ENST00000503123 ABCD1P33897 745 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 ZNF131P52739 623 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 SMTNP53814 917 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 PEX3P56589 373 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 RNASELQ05823 741 aaKnown RBP9.67□□□□□ -0.86
RNF4-203ENST00000503123 DSC1Q08554 894 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 CTC1Q2NKJ3 1217 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 DCAF4L1Q3SXM0 396 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 ARSHQ5FYA8 562 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 FAM173BQ6P4H8 233 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 KRI1Q8N9T8 703 aaKnown RBP9.67□□□□□ -0.86
RNF4-203ENST00000503123 LINC00301Q8NCQ3 95 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 RASSF8Q8NHQ8 419 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 LARP4BQ92615 738 aaKnown RBP9.67□□□□□ -0.86
RNF4-203ENST00000503123 RAD54LQ92698 747 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 CDCA3Q99618 268 aaPredicted RBP9.67□□□□□ -0.86
RNF4-203ENST00000503123 TMEM175Q9BSA9 504 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 NXF3Q9H4D5 531 aaKnown RBP9.67□□□□□ -0.86
RNF4-203ENST00000503123 PDZD7Q9H5P4 517 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 NRDE2Q9H7Z3 1164 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 UBE2ZQ9H832 354 aaPredicted RBP9.67□□□□□ -0.86
RNF4-203ENST00000503123 NGRNQ9NPE2 291 aaKnown RBP9.67□□□□□ -0.86
RNF4-203ENST00000503123 KMT5AQ9NQR1 393 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 BLOC1S4Q9NUP1 217 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 CCDC39Q9UFE4 941 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 TNFSF13BQ9Y275 285 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 INPP5FQ9Y2H2 1132 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 DOCK8Q8NF50 2099 aa9.67□□□□□ -0.86
RNF4-203ENST00000503123 SCN1AP35498 2009 aa9.66□□□□□ -0.86
RNF4-203ENST00000503123 CCDC169A6NNP5 214 aa9.66□□□□□ -0.86
RNF4-203ENST00000503123 NPTXRO95502 500 aa9.66□□□□□ -0.86
RNF4-203ENST00000503123 F13A1P00488 732 aa9.66□□□□□ -0.86
RNF4-203ENST00000503123 SSBP05455 408 aaKnown RBP eCLIP9.66□□□□□ -0.86
RNF4-203ENST00000503123 GALTP07902 379 aa9.66□□□□□ -0.86
RNF4-203ENST00000503123 DDIT3P35638 169 aa9.66□□□□□ -0.86
RNF4-203ENST00000503123 HYAL1Q12794 435 aa9.66□□□□□ -0.86
RNF4-203ENST00000503123 BMS1Q14692 1282 aaKnown RBP9.66□□□□□ -0.86
RNF4-203ENST00000503123 KARSQ15046 597 aaKnown RBP9.66□□□□□ -0.86
RNF4-203ENST00000503123 STK38Q15208 465 aa9.66□□□□□ -0.86
RNF4-203ENST00000503123 PUS10Q3MIT2 529 aaKnown RBP9.66□□□□□ -0.86
RNF4-203ENST00000503123 LEXMQ3ZCV2 418 aa9.66□□□□□ -0.86
RNF4-203ENST00000503123 ATF7IP2Q5U623 682 aa9.66□□□□□ -0.86
RNF4-203ENST00000503123 GPBP1Q86WP2 473 aa9.66□□□□□ -0.86
RNF4-203ENST00000503123 EFHBQ8N7U6 833 aa9.66□□□□□ -0.86
RNF4-203ENST00000503123 TMEM161BQ8NDZ6 487 aa9.66□□□□□ -0.86
RNF4-203ENST00000503123 LRRC15Q8TF66 581 aa9.66□□□□□ -0.86
RNF4-203ENST00000503123 TMEM169Q96HH4 297 aa9.66□□□□□ -0.86
RNF4-203ENST00000503123 IGSF21Q96ID5 467 aa9.66□□□□□ -0.86
RNF4-203ENST00000503123 EPSTI1Q96J88 318 aa9.66□□□□□ -0.86
RNF4-203ENST00000503123 FAM193BQ96PV7 902 aaPredicted RBP9.66□□□□□ -0.86
RNF4-203ENST00000503123 PLIN2Q99541 437 aa9.66□□□□□ -0.86
RNF4-203ENST00000503123 REEP2Q9BRK0 252 aa9.66□□□□□ -0.86
RNF4-203ENST00000503123 KIFC3Q9BVG8 833 aa9.66□□□□□ -0.86
RNF4-203ENST00000503123 MRPL4Q9BYD3 311 aaKnown RBP9.66□□□□□ -0.86
RNF4-203ENST00000503123 HES2Q9Y543 173 aa9.66□□□□□ -0.86
RNF4-203ENST00000503123 IRAK3Q9Y616 596 aa9.66□□□□□ -0.86
RNF4-203ENST00000503123 TTLL13PA6NNM8 815 aa9.65□□□□□ -0.86
RNF4-203ENST00000503123 SPTLC2O15270 562 aa9.65□□□□□ -0.86
RNF4-203ENST00000503123 BRD1O95696 1058 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms