RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 A0A0G2JNJ9 132 aa6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 CCDC189A1A4V9 331 aa6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 KLRG2A4D1S0 409 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 RASA4BC9J798 803 aa6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 RASA4O43374 803 aa6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 GLI1P08151 1106 aa6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 PAX3P23760 479 aa6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 ADSLP30566 484 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 PIK3CBP42338 1070 aa6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 ITGA1P56199 1179 aa6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 NKX6-1P78426 367 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 CDC42EP1Q00587 391 aa6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 BTKQ06187 659 aa6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 NOGQ13253 232 aa6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 ADAM9Q13443 819 aa6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 APOA5Q6Q788 366 aa6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 ABHD15Q6UXT9 468 aa6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 DPP9Q86TI2 863 aa6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 ATG4DQ86TL0 474 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 BCL6BQ8N143 479 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 PPM1EQ8WY54 764 aa6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 HOXB13Q92826 284 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 PHKBQ93100 1093 aa6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 CLPTM1LQ96KA5 538 aa6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 WDR92Q96MX6 357 aa6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 C22orf23Q9BZE7 217 aa6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 LRRC27Q9C0I9 530 aa6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 MANSC1Q9H8J5 431 aa6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 ARMT1Q9H993 441 aa6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 EPB41L4AQ9HCS5 686 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 TDP1Q9NUW8 608 aa6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 Q9UFV3 132 aa6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 TPCN1Q9ULQ1 816 aa6.54□□□□□ -1.36
HMGB1P3-201ENST00000502802 RHPN2P1A8MT19 583 aa6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 F5H423 210 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 N4BP3O15049 544 aa6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 FRS3O43559 492 aa6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 ARIH2O95376 493 aa6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 ATF2P15336 505 aa6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 ADCY8P40145 1251 aa6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 PRIM2P49643 509 aa6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 SRSF3P84103 164 aaKnown RBP6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 RAPGEF1Q13905 1077 aa6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 C19orf54Q5BKX5 351 aa6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 ANO1Q5XXA6 986 aa6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 APBB1IPQ7Z5R6 666 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 B3GNT8Q7Z7M8 397 aa6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 STK32CQ86UX6 486 aa6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 UNC5BQ8IZJ1 945 aa6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 DEPTORQ8TB45 409 aa6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 SNX33Q8WV41 574 aa6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 NKD2Q969F2 451 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 APIPQ96GX9 242 aa6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 FAM167AQ96KS9 214 aa6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 RIPOR3Q96MK2 946 aa6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 ZSWIM3Q96MP5 696 aa6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 NT5C1BQ96P26 610 aa6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 DMRTA2Q96SC8 542 aa6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 BTBD1Q9H0C5 482 aa6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 ZMAT3Q9HA38 289 aaKnown RBP6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 ATP6V0A4Q9HBG4 840 aa6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 TRMT13Q9NUP7 481 aaKnown RBP6.53□□□□□ -1.36
HMGB1P3-201ENST00000502802 LRRC14BA6NHZ5 514 aa6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 H3BUI4 141 aa6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 PHGDHO43175 533 aaKnown RBP6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 PRAMEF4O60810 478 aa6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 EIF5BO60841 1220 aaKnown RBP6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 CHGBP05060 677 aa6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 GAAP10253 952 aa6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 HNRNPLP14866 589 aaKnown RBP eCLIP6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 PFKLP17858 780 aa6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 RPL17P18621 184 aaKnown RBP6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 ECHS1P30084 290 aa6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 SLC6A9P48067 706 aa6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 UBE3CQ15386 1083 aa6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 KCNMB1Q16558 191 aa6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 KHDC1Q4VXA5 237 aaKnown RBP6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 Q6ZVL8 140 aa6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 HEATR3Q7Z4Q2 680 aa6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 ZNF605Q86T29 641 aa6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 LDHDQ86WU2 507 aa6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 MYLK4Q86YV6 388 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 ABI1Q8IZP0 508 aa6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 OR2C3Q8N628 320 aa6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 MTFMTQ96DP5 389 aaKnown RBP6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 SLC35A4Q96G79 324 aa6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 GORASP1Q9BQQ3 440 aa6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 HERPUD2Q9BSE4 406 aa6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 C11orf84Q9BUA3 381 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 LMBRD1Q9NUN5 540 aa6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 SIRT5Q9NXA8 310 aa6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 CROTQ9UKG9 612 aa6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 PCDHA3Q9Y5H8 950 aa6.52□□□□□ -1.37
HMGB1P3-201ENST00000502802 H0Y858 1186 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 DAPK3O43293 454 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 CYP7B1O75881 506 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 TYRP14679 529 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 HALP42357 657 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 CASP5P51878 434 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 NCKAP1LP55160 1127 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms