RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 STXBP5LQ9Y2K9 1186 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 RWDD3Q9Y3V2 267 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 HES2Q9Y543 173 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 IPPQ9Y573 584 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 PHLPP2Q6ZVD8 1323 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 KIAA1671Q9BY89 1806 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 MYMKA6NI61 221 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 C5orf67F2Z3F1 127 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 H0YCG3 227 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 GTPBP6O43824 516 aaPredicted RBP8.03□□□□□ -1.12
USP46-203ENST00000502443 TRAK2O60296 914 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 OFD1O75665 1012 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 SLC34A2O95436 690 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 EDN1P05305 212 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 LINC00271P0C7V0 271 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 ITGA4P13612 1032 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 IDEP14735 1019 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 CMA1P23946 247 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 ZNF131P52739 623 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 RNASELQ05823 741 aaKnown RBP8.03□□□□□ -1.12
USP46-203ENST00000502443 GPM6BQ13491 265 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 E2F4Q16254 413 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 NT5DC1Q5TFE4 455 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 ATF7IP2Q5U623 682 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 ADALQ6DHV7 355 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 GLB1LQ6UWU2 654 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 AGMOQ6ZNB7 445 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 LRRC55Q6ZSA7 311 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 TAS1R3Q7RTX0 852 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 HAUS6Q7Z4H7 955 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 FAM178BQ8IXR5 827 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 LRRC43Q8N309 656 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 TMEM161BQ8NDZ6 487 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 URGCPQ8TCY9 931 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 PLVAPQ9BX97 442 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 MRPL9Q9BYD2 267 aaKnown RBP8.03□□□□□ -1.12
USP46-203ENST00000502443 MRPL4Q9BYD3 311 aaKnown RBP8.03□□□□□ -1.12
USP46-203ENST00000502443 CUEDC2Q9H467 287 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 NXF3Q9H4D5 531 aaKnown RBP8.03□□□□□ -1.12
USP46-203ENST00000502443 PDZD7Q9H5P4 517 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 RSAD1Q9HA92 442 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 AAASQ9NRG9 546 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 HCSTQ9UBK5 93 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 KCNH3Q9ULD8 1083 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 PCDHB12Q9Y5F1 795 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 CDH23Q9H251 3354 aa8.03□□□□□ -1.12
USP46-203ENST00000502443 COL4A4P53420 1690 aaPredicted RBP8.02□□□□□ -1.13
USP46-203ENST00000502443 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.02□□□□□ -1.13
USP46-203ENST00000502443 A0A1B0GVL5 298 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 ARL5CA6NH57 179 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 H3BNC9 293 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 K7ENM7 598 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 LPXNO60711 386 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 RB1P06400 928 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 MAPTP10636 758 aaKnown RBP8.02□□□□□ -1.13
USP46-203ENST00000502443 LAG3P18627 525 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 AKAP5P24588 427 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 AFF1P51825 1210 aaKnown RBP8.02□□□□□ -1.13
USP46-203ENST00000502443 NCKAP1LP55160 1127 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 AMPD3Q01432 767 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 CCDC85BQ15834 202 aaPredicted RBP8.02□□□□□ -1.13
USP46-203ENST00000502443 NOMO2Q5JPE7 1267 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 EEF1DP3Q658K8 133 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 APBB1IPQ7Z5R6 666 aaPredicted RBP8.02□□□□□ -1.13
USP46-203ENST00000502443 SFR1Q86XK3 245 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 MICALL1Q8N3F8 863 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 KLHL23Q8NBE8 558 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 MAFAQ8NHW3 353 aaPredicted RBP8.02□□□□□ -1.13
USP46-203ENST00000502443 PPM1EQ8WY54 764 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 RSPH1Q8WYR4 309 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 DNAJC19Q96DA6 116 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 BICD1Q96G01 975 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 GAD1Q99259 594 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 ACO2Q99798 780 aaKnown RBP8.02□□□□□ -1.13
USP46-203ENST00000502443 PYM1Q9BRP8 204 aaKnown RBP8.02□□□□□ -1.13
USP46-203ENST00000502443 TCHPQ9BT92 498 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 C11orf84Q9BUA3 381 aaPredicted RBP8.02□□□□□ -1.13
USP46-203ENST00000502443 TARS2Q9BW92 718 aaKnown RBP8.02□□□□□ -1.13
USP46-203ENST00000502443 LRRC27Q9C0I9 530 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 RNF39Q9H2S5 420 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 TNMDQ9H2S6 317 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 CWH43Q9H720 699 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 MRPL44Q9H9J2 332 aaKnown RBP8.02□□□□□ -1.13
USP46-203ENST00000502443 ALG13Q9NP73 1137 aaKnown RBP8.02□□□□□ -1.13
USP46-203ENST00000502443 UBN1Q9NPG3 1134 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 PANK4Q9NVE7 773 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 TBC1D13Q9NVG8 400 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 KBTBD4Q9NVX7 518 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 TBC1D7Q9P0N9 293 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 KANSL3Q9P2N6 904 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 PARP2Q9UGN5 583 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 CIZ1Q9ULV3 898 aaPredicted RBP8.02□□□□□ -1.13
USP46-203ENST00000502443 TBX20Q9UMR3 447 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 PLAGL2Q9UPG8 496 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 TNFSF13BQ9Y275 285 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 MTCH2Q9Y6C9 303 aa8.02□□□□□ -1.13
USP46-203ENST00000502443 GOLGA6L4A6NEF3 574 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 HNRNPDLO14979 420 aaKnown RBP8.01□□□□□ -1.13
USP46-203ENST00000502443 GRM6O15303 877 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 ZC3H11AO75152 810 aaKnown RBP eCLIP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms