RNA–Protein interactions for RNA: ENST00000498529.5

CSNK1E-214, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-214ENST00000498529 AP3B2Q13367 1082 aa6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 HTR4Q13639 388 aa6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 PUM1Q14671 1186 aaKnown RBP eCLIP6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 ODR4Q5SWX8 454 aa6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 PHLDB3Q6NSJ2 640 aa6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 CES5AQ6NT32 575 aa6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 ZNF746Q6NUN9 644 aaPredicted RBP6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 TMC5Q6UXY8 1006 aa6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 CCDC149Q6ZUS6 474 aa6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 DGLUCYQ7Z3D6 616 aa6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 TMC7Q7Z402 723 aa6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 CATIPQ7Z7H3 387 aa6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 ZBTB33Q86T24 672 aa6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 SIX5Q8N196 739 aa6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 VPS52Q8N1B4 723 aa6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 FLCNQ8NFG4 579 aa6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 RSAD2Q8WXG1 361 aa6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 KLHL5Q96PQ7 755 aa6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 MYADMQ96S97 322 aa6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 PPP1R16BQ96T49 567 aa6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 MRPL9Q9BYD2 267 aaKnown RBP6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 WDR6Q9NNW5 1121 aaKnown RBP6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 ZNF302Q9NR11 478 aa6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 SLC2A4RGQ9NR83 387 aa6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 IGSF9Q9P2J2 1179 aa6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 DNAJB4Q9UDY4 337 aa6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 PUF60Q9UHX1 559 aaKnown RBP6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 GPSM3Q9Y4H4 160 aa6.34□□□□□ -1.39
CSNK1E-214ENST00000498529 AKAP13Q12802 2813 aa6.34□□□□□ -1.4
CSNK1E-214ENST00000498529 PLXND1Q9Y4D7 1925 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 ESYT2A0FGR8 921 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 SPDYE3A6NKU9 549 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 PRC1O43663 620 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 OFD1O75665 1012 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 SRFP11831 508 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 TDGF1P13385 188 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 FGFR4P22455 802 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 CIITAP33076 1130 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 KIF5BP33176 963 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 METAP2P50579 478 aaKnown RBP eCLIP6.33□□□□□ -1.49e-7■■■■■ 27
CSNK1E-214ENST00000498529 AFF1P51825 1210 aaKnown RBP6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 NLRP11P59045 1033 aaKnown RBP6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 NR1H3Q13133 447 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 GIT2Q14161 759 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 LETM2Q2VYF4 491 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 ATAT1Q5SQI0 421 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 SPOUT1Q5T280 376 aaKnown RBP6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 PDXDC2PQ6P474 469 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 APOA5Q6Q788 366 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 AGMOQ6ZNB7 445 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 ZNF280BQ86YH2 543 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 SMAP1Q8IYB5 467 aaPredicted RBP6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 LRRC71Q8N4P6 559 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 DCLK2Q8N568 766 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 KCTD17Q8N5Z5 321 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 FAM160A2Q8N612 972 aaPredicted RBP6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 ZBTB44Q8NCP5 570 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 PJA1Q8NG27 643 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 CTCFLQ8NI51 663 aaPredicted RBP6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 TNPO1Q92973 898 aaKnown RBP6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 SDF4Q9BRK5 362 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 HERC2P3Q9BVR0 1158 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 LSG1Q9H089 658 aaKnown RBP6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 TBC1D17Q9HA65 648 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 RXFP1Q9HBX9 757 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 SEC63Q9UGP8 760 aaKnown RBP6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 FKBPLQ9UIM3 349 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 DBR1Q9UK59 544 aaKnown RBP6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 GINS2Q9Y248 185 aa6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 RBM8AQ9Y5S9 174 aaKnown RBP6.33□□□□□ -1.4
CSNK1E-214ENST00000498529 LAMA5O15230 3695 aa6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 ERICH2A1L162 156 aa6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 hCG_1984214I3L0E3 225 aa6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 DDX39AO00148 427 aaKnown RBP6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 IPO5O00410 1097 aaKnown RBP6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 LRRN2O75325 713 aa6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 DDHD2O94830 711 aa6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 CXCL14O95715 111 aa6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 C1RP00736 705 aa6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 FOSP01100 380 aaPredicted RBP6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 GNAQP50148 359 aa6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 STARD6P59095 220 aa6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 PRKCEQ02156 737 aa6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 KRT17Q04695 432 aa6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 DSC1Q08554 894 aa6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 TBC1D8BQ0IIM8 1120 aa6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 TRDNQ13061 729 aa6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 AAMPQ13685 434 aa6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 SART3Q15020 963 aaKnown RBP6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 ZNF528Q3MIS6 628 aa6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 UBXN11Q5T124 520 aa6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 FAM160B1Q5W0V3 765 aa6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 SWSAP1Q6NVH7 229 aa6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 CYP26C1Q6V0L0 522 aa6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 OTOP3Q7RTS5 596 aa6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 MRPL10Q7Z7H8 261 aaKnown RBP6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 RALYLQ86SE5 291 aaKnown RBP6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 KIAA2013Q8IYS2 634 aa6.32□□□□□ -1.4
CSNK1E-214ENST00000498529 SLC44A3Q8N4M1 653 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms