RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 TTC9Q92623 222 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 KISS1RQ969F8 398 aaPredicted RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 ZG16BQ96DA0 208 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 IFT43Q96FT9 208 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 NAF1Q96HR8 494 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 PCDHAC1Q9H158 963 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 DNAJC25Q9H1X3 360 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 TBC1D23Q9NUY8 699 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 OCIAD1Q9NX40 245 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 ZC3H7BQ9UGR2 993 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 DSEQ9UL01 958 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 USP18Q9UMW8 372 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 ABCC6O95255 1503 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 HEG1Q9ULI3 1381 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 PHRF1Q9P1Y6 1649 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 COL4A4P53420 1690 aaPredicted RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 POM121CA8CG34 1229 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 H3BS24 57 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 TMX2-CTNND1H3BSU7 103 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 SULT2B1O00204 365 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 MTRF1O75570 445 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 ALX3O95076 343 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 DNAL4O96015 105 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 CFIP05156 583 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 H2AFB1P0C5Y9 115 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 H2AFB2P0C5Z0 115 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 CALM1P0DP23 149 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 CALM2P0DP24 149 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 CALM3P0DP25 149 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 ZNF44P15621 663 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 DNAJA1P31689 397 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 VSX2P58304 361 aaPredicted RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 SHC2P98077 582 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 TAGLNQ01995 201 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 FMR1Q06787 632 aaKnown RBP eCLIP1.6□□□□□ -2.15
XRN1-214ENST00000498077 FHL3Q13643 280 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 BICRALQ6AI39 1079 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 LYPD4Q6UWN0 246 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 CRELD2Q6UXH1 353 aaPredicted RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 ASRGL1Q7L266 308 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 DHDDSQ86SQ9 333 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 NRROSQ86YC3 692 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 PLD3Q8IV08 490 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 CCDC144CPQ8IYA2 1237 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 RNF10Q8N5U6 811 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 CCDC191Q8NCU4 936 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 MNS1Q8NEH6 495 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 LRRN4Q8WUT4 740 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 RPL10LQ96L21 214 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 ZDHHC15Q96MV8 337 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 FOXN4Q96NZ1 517 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 KRTAP4-12Q9BQ66 201 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 HDHD3Q9BSH5 251 aaPredicted RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 FN3KQ9H479 309 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 TTF2Q9UNY4 1162 aaKnown RBP1.6□□□□□ -2.15
XRN1-214ENST00000498077 KCNK7Q9Y2U2 307 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 TMX2Q9Y320 296 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 TBX22Q9Y458 520 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 RNF114Q9Y508 228 aa1.6□□□□□ -2.15
XRN1-214ENST00000498077 TJP1Q07157 1748 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 ARHGEF37A1IGU5 675 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 SAGE2PA6NJ88 616 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 A8MV72 311 aaPredicted RBP1.59□□□□□ -2.15
XRN1-214ENST00000498077 FPGTO14772 594 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 FOXO3O43524 673 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 SLC25A17O43808 307 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 DDAH1O94760 285 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 PDE8BO95263 885 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 CFDP00746 253 aaPredicted RBP1.59□□□□□ -2.15
XRN1-214ENST00000498077 CD4P01730 458 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 POLR2MP0CAP2 368 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 CPA1P15085 419 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 PTPRAP18433 802 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 ITGALP20701 1170 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 HMOX2P30519 316 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 UBA7P41226 1012 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 CD97P48960 835 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 PTH2RP49190 550 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 EIF2B2P49770 351 aaKnown RBP1.59□□□□□ -2.15
XRN1-214ENST00000498077 DNM2P50570 870 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 SEC13P55735 322 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 MRPS21P82921 87 aaKnown RBP1.59□□□□□ -2.15
XRN1-214ENST00000498077 SMAD3P84022 425 aaKnown RBP1.59□□□□□ -2.15
XRN1-214ENST00000498077 KLC1Q07866 573 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 SRSF1Q07955 248 aaKnown RBP eCLIP1.59□□□□□ -2.15
XRN1-214ENST00000498077 EHHADHQ08426 723 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 PTGES3Q15185 160 aaKnown RBP1.59□□□□□ -2.15
XRN1-214ENST00000498077 NFE2L2Q16236 605 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 ASIC2Q16515 512 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 ZNF628Q5EBL2 1059 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 ANKRD22Q5VYY1 191 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 ANKRD49Q8WVL7 239 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 KCNJ9Q92806 393 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 FBXL20Q96IG2 436 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 TIGD1Q96MW7 591 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 PPP1R16BQ96T49 567 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 ACO2Q99798 780 aaKnown RBP1.59□□□□□ -2.15
XRN1-214ENST00000498077 PHF20Q9BVI0 1012 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 EMILIN2Q9BXX0 1053 aa1.59□□□□□ -2.15
XRN1-214ENST00000498077 NFKBIZQ9BYH8 718 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms