RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 TMC5Q6UXY8 1006 aa20.64■□□□□ 0.89
PRKCB-209ENST00000498058 IFNLR1Q8IU57 520 aaPredicted RBP20.64■□□□□ 0.89
PRKCB-209ENST00000498058 SUGP1Q8IWZ8 645 aaKnown RBP20.64■□□□□ 0.89
PRKCB-209ENST00000498058 DIS3L2Q8IYB7 885 aaKnown RBP20.64■□□□□ 0.89
PRKCB-209ENST00000498058 COLGALT2Q8IYK4 626 aa20.64■□□□□ 0.89
PRKCB-209ENST00000498058 NECTIN4Q96NY8 510 aa20.64■□□□□ 0.89
PRKCB-209ENST00000498058 GAD1Q99259 594 aa20.64■□□□□ 0.89
PRKCB-209ENST00000498058 TMEM175Q9BSA9 504 aa20.64■□□□□ 0.89
PRKCB-209ENST00000498058 TTC12Q9H892 705 aaPredicted RBP20.64■□□□□ 0.89
PRKCB-209ENST00000498058 DZANK1Q9NVP4 752 aa20.64■□□□□ 0.89
PRKCB-209ENST00000498058 PCDHA12Q9UN75 941 aa20.64■□□□□ 0.89
PRKCB-209ENST00000498058 FAN1Q9Y2M0 1017 aa20.64■□□□□ 0.89
PRKCB-209ENST00000498058 NR2E1Q9Y466 385 aa20.64■□□□□ 0.89
PRKCB-209ENST00000498058 ALDH2P05091 517 aa20.63■□□□□ 0.89
PRKCB-209ENST00000498058 ITGA4P13612 1032 aa20.63■□□□□ 0.89
PRKCB-209ENST00000498058 GLRA2P23416 452 aa20.63■□□□□ 0.89
PRKCB-209ENST00000498058 TXKP42681 527 aa20.63■□□□□ 0.89
PRKCB-209ENST00000498058 CLCN4P51793 760 aa20.63■□□□□ 0.89
PRKCB-209ENST00000498058 GIT2Q14161 759 aa20.63■□□□□ 0.89
PRKCB-209ENST00000498058 BMS1Q14692 1282 aaKnown RBP20.63■□□□□ 0.89
PRKCB-209ENST00000498058 CALCRLQ16602 461 aa20.63■□□□□ 0.89
PRKCB-209ENST00000498058 CDR2LQ86X02 465 aaPredicted RBP20.63■□□□□ 0.89
PRKCB-209ENST00000498058 RNF168Q8IYW5 571 aaPredicted RBP20.63■□□□□ 0.89
PRKCB-209ENST00000498058 PIGOQ8TEQ8 1089 aa20.63■□□□□ 0.89
PRKCB-209ENST00000498058 RIPOR3Q96MK2 946 aa20.63■□□□□ 0.89
PRKCB-209ENST00000498058 ZFP42Q96MM3 310 aa20.63■□□□□ 0.89
PRKCB-209ENST00000498058 PRG3Q9Y2Y8 225 aaPredicted RBP20.63■□□□□ 0.89
PRKCB-209ENST00000498058 ARL5CA6NH57 179 aa20.62■□□□□ 0.89
PRKCB-209ENST00000498058 POTEMA6NI47 508 aa20.62■□□□□ 0.89
PRKCB-209ENST00000498058 INPPL1O15357 1258 aa20.62■□□□□ 0.89
PRKCB-209ENST00000498058 B4GALT5O43286 388 aa20.62■□□□□ 0.89
PRKCB-209ENST00000498058 ERLIN2O94905 339 aa20.62■□□□□ 0.89
PRKCB-209ENST00000498058 ARF4P18085 180 aaPredicted RBP20.62■□□□□ 0.89
PRKCB-209ENST00000498058 AVPR2P30518 371 aa20.62■□□□□ 0.89
PRKCB-209ENST00000498058 MLH1P40692 756 aa20.62■□□□□ 0.89
PRKCB-209ENST00000498058 RARRES1P49788 294 aa20.62■□□□□ 0.89
PRKCB-209ENST00000498058 DSC1Q08554 894 aa20.62■□□□□ 0.89
PRKCB-209ENST00000498058 ZBTB33Q86T24 672 aa20.62■□□□□ 0.89
PRKCB-209ENST00000498058 GSTCDQ8NEC7 633 aa20.62■□□□□ 0.89
PRKCB-209ENST00000498058 FAM193BQ96PV7 902 aaPredicted RBP20.62■□□□□ 0.89
PRKCB-209ENST00000498058 CSRNP2Q9H175 543 aa20.62■□□□□ 0.89
PRKCB-209ENST00000498058 ANKEF1Q9NU02 776 aa20.62■□□□□ 0.89
PRKCB-209ENST00000498058 KANSL3Q9P2N6 904 aa20.62■□□□□ 0.89
PRKCB-209ENST00000498058 LIMD1Q9UGP4 676 aa20.62■□□□□ 0.89
PRKCB-209ENST00000498058 CARNS1A5YM72 827 aa20.61■□□□□ 0.89
PRKCB-209ENST00000498058 INO80B-WBP1J3KQ70 363 aa20.61■□□□□ 0.89
PRKCB-209ENST00000498058 NEMFO60524 1076 aa20.61■□□□□ 0.89
PRKCB-209ENST00000498058 SPATA31C1P0DKV0 1188 aa20.61■□□□□ 0.89
PRKCB-209ENST00000498058 RBM25P49756 843 aaKnown RBP20.61■□□□□ 0.89
PRKCB-209ENST00000498058 SCNN1GP51170 649 aa20.61■□□□□ 0.89
PRKCB-209ENST00000498058 MXD4Q14582 209 aaPredicted RBP20.61■□□□□ 0.89
PRKCB-209ENST00000498058 ATAT1Q5SQI0 421 aa20.61■□□□□ 0.89
PRKCB-209ENST00000498058 GPR149Q86SP6 731 aa20.61■□□□□ 0.89
PRKCB-209ENST00000498058 CABP7Q86V35 215 aa20.61■□□□□ 0.89
PRKCB-209ENST00000498058 ZDHHC14Q8IZN3 488 aa20.61■□□□□ 0.89
PRKCB-209ENST00000498058 TMEM87AQ8NBN3 555 aa20.61■□□□□ 0.89
PRKCB-209ENST00000498058 HERC2P3Q9BVR0 1158 aa20.61■□□□□ 0.89
PRKCB-209ENST00000498058 APOL6Q9BWW8 343 aa20.61■□□□□ 0.89
PRKCB-209ENST00000498058 NXF3Q9H4D5 531 aaKnown RBP20.61■□□□□ 0.89
PRKCB-209ENST00000498058 BRMS1Q9HCU9 246 aa20.61■□□□□ 0.89
PRKCB-209ENST00000498058 GPRC5CQ9NQ84 441 aa20.61■□□□□ 0.89
PRKCB-209ENST00000498058 DBR1Q9UK59 544 aaKnown RBP20.61■□□□□ 0.89
PRKCB-209ENST00000498058 SORCS3Q9UPU3 1222 aa20.61■□□□□ 0.89
PRKCB-209ENST00000498058 C2CD2LO14523 706 aa20.6■□□□□ 0.89
PRKCB-209ENST00000498058 DGAT1O75907 488 aa20.6■□□□□ 0.89
PRKCB-209ENST00000498058 SOD2P04179 222 aa20.6■□□□□ 0.89
PRKCB-209ENST00000498058 KLRC2P26717 231 aa20.6■□□□□ 0.89
PRKCB-209ENST00000498058 AXLP30530 894 aa20.6■□□□□ 0.89
PRKCB-209ENST00000498058 NEK4P51957 841 aa20.6■□□□□ 0.89
PRKCB-209ENST00000498058 POU5F1BQ06416 359 aa20.6■□□□□ 0.89
PRKCB-209ENST00000498058 NOTUMQ6P988 496 aa20.6■□□□□ 0.89
PRKCB-209ENST00000498058 CNNM3Q8NE01 707 aa20.6■□□□□ 0.89
PRKCB-209ENST00000498058 TBC1D32Q96NH3 1257 aa20.6■□□□□ 0.89
PRKCB-209ENST00000498058 TTLL13PA6NNM8 815 aa20.59■□□□□ 0.89
PRKCB-209ENST00000498058 MYBP10242 640 aa20.59■□□□□ 0.89
PRKCB-209ENST00000498058 AKAP5P24588 427 aa20.59■□□□□ 0.89
PRKCB-209ENST00000498058 OR1G1P47890 313 aa20.59■□□□□ 0.89
PRKCB-209ENST00000498058 PTPN5P54829 565 aa20.59■□□□□ 0.89
PRKCB-209ENST00000498058 GUCY1B3Q02153 619 aa20.59■□□□□ 0.89
PRKCB-209ENST00000498058 MTMR3Q13615 1198 aa20.59■□□□□ 0.89
PRKCB-209ENST00000498058 TFDP1Q14186 410 aa20.59■□□□□ 0.89
PRKCB-209ENST00000498058 KIAA0319Q5VV43 1072 aa20.59■□□□□ 0.89
PRKCB-209ENST00000498058 MAEAQ7L5Y9 396 aa20.59■□□□□ 0.89
PRKCB-209ENST00000498058 PPFIBP1Q86W92 1011 aa20.59■□□□□ 0.89
PRKCB-209ENST00000498058 TDRD5Q8NAT2 981 aaKnown RBP20.59■□□□□ 0.89
PRKCB-209ENST00000498058 RABGGTAQ92696 567 aa20.59■□□□□ 0.89
PRKCB-209ENST00000498058 CCDC51Q96ER9 411 aa20.59■□□□□ 0.89
PRKCB-209ENST00000498058 RPS6KC1Q96S38 1066 aa20.59■□□□□ 0.89
PRKCB-209ENST00000498058 EMILIN2Q9BXX0 1053 aa20.59■□□□□ 0.89
PRKCB-209ENST00000498058 POLR3FQ9H1D9 316 aaPredicted RBP20.59■□□□□ 0.89
PRKCB-209ENST00000498058 SFXN1Q9H9B4 322 aa20.59■□□□□ 0.89
PRKCB-209ENST00000498058 MRPL17Q9NRX2 175 aaKnown RBP20.59■□□□□ 0.89
PRKCB-209ENST00000498058 FAM86C1Q9NVL1 165 aa20.59■□□□□ 0.89
PRKCB-209ENST00000498058 CACNG4Q9UBN1 327 aa20.59■□□□□ 0.89
PRKCB-209ENST00000498058 CACNA1HO95180 2353 aa20.58■□□□□ 0.89
PRKCB-209ENST00000498058 TEX28O15482 410 aa20.58■□□□□ 0.89
PRKCB-209ENST00000498058 USO1O60763 962 aaKnown RBP20.58■□□□□ 0.89
PRKCB-209ENST00000498058 MED24O75448 989 aa20.58■□□□□ 0.89
PRKCB-209ENST00000498058 ATP2B1P20020 1258 aa20.58■□□□□ 0.89
PRKCB-209ENST00000498058 PCBP1Q15365 356 aaKnown RBP eCLIP20.58■□□□□ 0.892e-9■■■■■ 29.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms