RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 CNNM2Q9H8M5 875 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 NLRC4Q9NPP4 1024 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 ECHDC1Q9NTX5 307 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 PAG1Q9NWQ8 432 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 AATFQ9NY61 560 aaKnown RBP eCLIP6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 STAP2Q9UGK3 403 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 FBXO2Q9UK22 296 aaPredicted RBP6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 PCDHA4Q9UN74 947 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 AFG3L2Q9Y4W6 797 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 SMCHD1A6NHR9 2005 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 BRCA2P51587 3418 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 PRRT4C9JH25 899 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 GSC2O15499 205 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 PRODHO43272 600 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 TLR2O60603 784 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 PGRP06401 933 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 ZFYP08048 801 aaPredicted RBP6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 JMJD7P0C870 316 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 TYRP1P17643 537 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 CYP7A1P22680 504 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 DDIT3P35638 169 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 RECQLP46063 649 aaPredicted RBP6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 RGS19P49795 217 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 PPP2R2AP63151 447 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 TCP10Q12799 353 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 STK3Q13188 491 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 GRM1Q13255 1194 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 PRKG1Q13976 671 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 SIM2Q14190 667 aaPredicted RBP6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 ABCB5Q2M3G0 1257 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 SGO2Q562F6 1265 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 CDCP2Q5VXM1 449 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 CDPF1Q6NVV7 123 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 MMS22LQ6ZRQ5 1243 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 CCDC89Q8N998 374 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 KBTBD3Q8NAB2 608 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 PPHLN1Q8NEY8 458 aaKnown RBP6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 ZKSCAN4Q969J2 545 aaPredicted RBP6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 NOL10Q9BSC4 688 aaKnown RBP6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 ACSS3Q9H6R3 686 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 DISC1Q9NRI5 854 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 FAM105AQ9NUU6 356 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 KLHL11Q9NVR0 708 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 ALPK3Q96L96 1907 aa6.81□□□□□ -1.32
TMEM39A-212ENST00000497993 MCM3APO60318 1980 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 ZNF532Q9HCE3 1301 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 CCL15-CCL14A0A0B4J2E2 113 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 FAM95CA0A1B0GW59 222 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 SLC22A31A6NKX4 558 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 BTBD19C9JJ37 291 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 K7ESF4 209 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 FKTNO75072 461 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 IDH1O75874 414 aaKnown RBP6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 GLRX3O76003 335 aaKnown RBP6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 ASNSP08243 561 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 MYBL2P10244 700 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 SERPINB3P29508 390 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 CRHR2Q13324 411 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 GRM3Q14832 879 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 CCL15Q16663 113 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 SLC4A8Q2Y0W8 1093 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 ICE2Q659A1 982 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 C17orf99Q6UX52 265 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 MIGA2Q7L4E1 593 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 HDXQ7Z353 690 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 FAM43AQ8N2R8 423 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 CPA6Q8N4T0 437 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 RNF214Q8ND24 703 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 GSTCDQ8NEC7 633 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 FBLIM1Q8WUP2 373 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 SNRNP27Q8WVK2 155 aaKnown RBP6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 TRMT2BQ96GJ1 504 aaKnown RBP6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 ABHD8Q96I13 439 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 FUBP3Q96I24 572 aaKnown RBP eCLIP6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 DHRS1Q96LJ7 313 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 C12orf42Q96LP6 360 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 AIFM3Q96NN9 605 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 NAP1L5Q96NT1 182 aaPredicted RBP6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 SLC9A7Q96T83 725 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 NUP88Q99567 741 aaPredicted RBP6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 SEMA6BQ9H3T3 888 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 R3HDMLQ9H3Y0 253 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 C7orf69Q9H7B7 122 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 PIDD1Q9HB75 910 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 DCP1AQ9NPI6 582 aaPredicted RBP6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 ATP8A2Q9NTI2 1148 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 REV1Q9UBZ9 1251 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 PHTF1Q9UMS5 762 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 FAM50BQ9Y247 325 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 MORC2Q9Y6X9 1032 aaPredicted RBP6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 PLIN4Q96Q06 1357 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 LCTP09848 1927 aa6.8□□□□□ -1.32
TMEM39A-212ENST00000497993 ZMYM6O95789 1325 aa6.79□□□□□ -1.32
TMEM39A-212ENST00000497993 GOLIM4O00461 696 aa6.79□□□□□ -1.32
TMEM39A-212ENST00000497993 FANCGO15287 622 aa6.79□□□□□ -1.32
TMEM39A-212ENST00000497993 ADAM23O75077 832 aa6.79□□□□□ -1.32
TMEM39A-212ENST00000497993 HLA-DOAP06340 250 aa6.79□□□□□ -1.32
TMEM39A-212ENST00000497993 HOXA7P31268 230 aaPredicted RBP6.79□□□□□ -1.32
TMEM39A-212ENST00000497993 CCT5P48643 541 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms