RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 SKIP12755 728 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 ARF4P18085 180 aaPredicted RBP12.41□□□□□ -0.42
ERCC8-208ENST00000497892 IBSPP21815 317 aaPredicted RBP12.41□□□□□ -0.42
ERCC8-208ENST00000497892 AXLP30530 894 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 GATMP50440 423 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 EFNA5P52803 228 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 RAD51AP2Q09MP3 1159 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 DMP1Q13316 513 aaPredicted RBP12.41□□□□□ -0.42
ERCC8-208ENST00000497892 BTG3Q14201 252 aaPredicted RBP12.41□□□□□ -0.42
ERCC8-208ENST00000497892 FAM187BQ17R55 369 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 NAALADL2Q58DX5 795 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 ARSHQ5FYA8 562 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 UBXN11Q5T124 520 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 AXDND1Q5T1B0 1012 aaPredicted RBP12.41□□□□□ -0.42
ERCC8-208ENST00000497892 NOTUMQ6P988 496 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 GPBP1Q86WP2 473 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 FIBCD1Q8N539 461 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 DEPTORQ8TB45 409 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 MYLIPQ8WY64 445 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 ARNTL2Q8WYA1 636 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 SAMD11Q96NU1 681 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 C17orf80Q9BSJ5 609 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 KIFC3Q9BVG8 833 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 FZD8Q9H461 694 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 CERS4Q9HA82 394 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 POLD4Q9HCU8 107 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 RNF19AQ9NV58 838 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 PRMT7Q9NVM4 692 aaPredicted RBP12.41□□□□□ -0.42
ERCC8-208ENST00000497892 RCOR1Q9UKL0 485 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 ODF2LQ9ULJ1 636 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 STXBP5LQ9Y2K9 1186 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 ATP6V1DQ9Y5K8 247 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 COL6A3P12111 3177 aa12.4□□□□□ -0.42
ERCC8-208ENST00000497892 PHLPP2Q6ZVD8 1323 aa12.4□□□□□ -0.42
ERCC8-208ENST00000497892 EYSQ5T1H1 3165 aa12.4□□□□□ -0.42
ERCC8-208ENST00000497892 A0A087X0B3 334 aa12.4□□□□□ -0.42
ERCC8-208ENST00000497892 EPOPA6NHQ4 379 aa12.4□□□□□ -0.42
ERCC8-208ENST00000497892 ZNF623O75123 536 aa12.4□□□□□ -0.42
ERCC8-208ENST00000497892 PLS3P13797 630 aa12.4□□□□□ -0.42
ERCC8-208ENST00000497892 NPTX2P47972 431 aa12.4□□□□□ -0.42
ERCC8-208ENST00000497892 ME1P48163 572 aa12.4□□□□□ -0.42
ERCC8-208ENST00000497892 PEX3P56589 373 aa12.4□□□□□ -0.42
ERCC8-208ENST00000497892 KRT85P78386 507 aa12.4□□□□□ -0.42
ERCC8-208ENST00000497892 NCBP1Q09161 790 aaKnown RBP12.4□□□□□ -0.42
ERCC8-208ENST00000497892 MCM6Q14566 821 aa12.4□□□□□ -0.42
ERCC8-208ENST00000497892 MAPK6Q16659 721 aa12.4□□□□□ -0.42
ERCC8-208ENST00000497892 PAN2Q504Q3 1202 aaKnown RBP12.4□□□□□ -0.42
ERCC8-208ENST00000497892 CLLU1OSQ5K130 101 aa12.4□□□□□ -0.42
ERCC8-208ENST00000497892 RRAGBQ5VZM2 374 aa12.4□□□□□ -0.42
ERCC8-208ENST00000497892 SHC4Q6S5L8 630 aa12.4□□□□□ -0.42
ERCC8-208ENST00000497892 CCDC73Q6ZRK6 1079 aa12.4□□□□□ -0.42
ERCC8-208ENST00000497892 RNF169Q8NCN4 708 aa12.4□□□□□ -0.42
ERCC8-208ENST00000497892 CLP1Q92989 425 aaKnown RBP12.4□□□□□ -0.42
ERCC8-208ENST00000497892 REEP2Q9BRK0 252 aa12.4□□□□□ -0.42
ERCC8-208ENST00000497892 TSHZ2Q9NRE2 1034 aa12.4□□□□□ -0.42
ERCC8-208ENST00000497892 ARHGAP28Q9P2N2 729 aa12.4□□□□□ -0.42
ERCC8-208ENST00000497892 MTUS1Q9ULD2 1270 aa12.4□□□□□ -0.42
ERCC8-208ENST00000497892 PCDHB2Q9Y5E7 798 aa12.4□□□□□ -0.42
ERCC8-208ENST00000497892 MRPL42Q9Y6G3 142 aaKnown RBP12.4□□□□□ -0.42
ERCC8-208ENST00000497892 NPHP3-ACAD11A0A0J9YXS1 232 aa12.39□□□□□ -0.43
ERCC8-208ENST00000497892 A0A1B0GUA9 196 aa12.39□□□□□ -0.43
ERCC8-208ENST00000497892 CCDC169A6NNP5 214 aa12.39□□□□□ -0.43
ERCC8-208ENST00000497892 C3orf80F5H4A9 247 aa12.39□□□□□ -0.43
ERCC8-208ENST00000497892 SMAPO00193 183 aa12.39□□□□□ -0.43
ERCC8-208ENST00000497892 ACKR2O00590 384 aa12.39□□□□□ -0.43
ERCC8-208ENST00000497892 EDN1P05305 212 aa12.39□□□□□ -0.43
ERCC8-208ENST00000497892 PRKCBP05771 671 aa12.39□□□□□ -0.43
ERCC8-208ENST00000497892 FOSL2P15408 326 aa12.39□□□□□ -0.43
ERCC8-208ENST00000497892 NCLP19338 710 aaKnown RBP12.39□□□□□ -0.43
ERCC8-208ENST00000497892 STAT6P42226 847 aa12.39□□□□□ -0.43
ERCC8-208ENST00000497892 ZNF131P52739 623 aa12.39□□□□□ -0.43
ERCC8-208ENST00000497892 NUCB2P80303 420 aa12.39□□□□□ -0.43
ERCC8-208ENST00000497892 PRPF4BQ13523 1007 aaKnown RBP12.39□□□□□ -0.43
ERCC8-208ENST00000497892 ADGRE1Q14246 886 aa12.39□□□□□ -0.43
ERCC8-208ENST00000497892 DHX8Q14562 1220 aaKnown RBP12.39□□□□□ -0.43
ERCC8-208ENST00000497892 EPC2Q52LR7 807 aa12.39□□□□□ -0.43
ERCC8-208ENST00000497892 MRPL10Q7Z7H8 261 aaKnown RBP12.39□□□□□ -0.43
ERCC8-208ENST00000497892 TMEM192Q8IY95 271 aa12.39□□□□□ -0.43
ERCC8-208ENST00000497892 ABI1Q8IZP0 508 aa12.39□□□□□ -0.43
ERCC8-208ENST00000497892 LRRC43Q8N309 656 aa12.39□□□□□ -0.43
ERCC8-208ENST00000497892 LEO1Q8WVC0 666 aaPredicted RBP12.39□□□□□ -0.43
ERCC8-208ENST00000497892 SPIRE2Q8WWL2 714 aa12.39□□□□□ -0.43
ERCC8-208ENST00000497892 RSPH1Q8WYR4 309 aa12.39□□□□□ -0.43
ERCC8-208ENST00000497892 CPB2Q96IY4 423 aa12.39□□□□□ -0.43
ERCC8-208ENST00000497892 CHAMP1Q96JM3 812 aa12.39□□□□□ -0.43
ERCC8-208ENST00000497892 GAS2L1Q99501 681 aaPredicted RBP12.39□□□□□ -0.43
ERCC8-208ENST00000497892 NTPCRQ9BSD7 190 aaKnown RBP12.39□□□□□ -0.43
ERCC8-208ENST00000497892 TMEM117Q9H0C3 514 aa12.39□□□□□ -0.43
ERCC8-208ENST00000497892 KMT5AQ9NQR1 393 aa12.39□□□□□ -0.43
ERCC8-208ENST00000497892 PCDHA7Q9UN72 937 aa12.39□□□□□ -0.43
ERCC8-208ENST00000497892 RWDD3Q9Y3V2 267 aa12.39□□□□□ -0.43
ERCC8-208ENST00000497892 ATG2AQ2TAZ0 1938 aa12.39□□□□□ -0.43
ERCC8-208ENST00000497892 TBKBP1A7MCY6 615 aa12.38□□□□□ -0.43
ERCC8-208ENST00000497892 MEIS3P2A8K0S8 358 aa12.38□□□□□ -0.43
ERCC8-208ENST00000497892 SFI1A8K8P3 1242 aa12.38□□□□□ -0.43
ERCC8-208ENST00000497892 C5orf67F2Z3F1 127 aa12.38□□□□□ -0.43
ERCC8-208ENST00000497892 LPXNO60711 386 aa12.38□□□□□ -0.43
ERCC8-208ENST00000497892 KRT18P05783 430 aaKnown RBP12.38□□□□□ -0.43
ERCC8-208ENST00000497892 CTNNB1P35222 781 aa12.38□□□□□ -0.43
ERCC8-208ENST00000497892 GIT2Q14161 759 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms