RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 NUDT17P0C025 328 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 PON1P27169 355 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 POLGP54098 1239 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 USP46P62068 366 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 IKQ13123 557 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 CCDC152Q4G0S7 254 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 C6orf163Q5TEZ5 329 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 PHLDB3Q6NSJ2 640 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 IZUMO2Q6UXV1 221 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 IRF2BP2Q7Z5L9 587 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 PALB2Q86YC2 1186 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 CCDC125Q86Z20 511 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 TRIM59Q8IWR1 403 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 DCLRE1BQ9H816 532 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 ARMCX1Q9P291 453 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 NAALADL1Q9UQQ1 740 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 CHKBQ9Y259 395 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 BZW2Q9Y6E2 419 aaKnown RBP11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 GOLGB1Q14789 3259 aaKnown RBP11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 C2orf71A6NGG8 1288 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 USP1O94782 785 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 FTLP02792 175 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 FAM200BP0CF97 657 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 PPP2R5CQ13362 524 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 FOXB2Q5VYV0 432 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 KAZNQ674X7 775 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 TTC27Q6P3X3 843 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 VSTM1Q6UX27 236 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 NLRP9Q7RTR0 991 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 SPATA24Q86W54 205 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 SFR1Q86XK3 245 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 LRRC47Q8N1G4 583 aaKnown RBP11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 ANKRD35Q8N283 1001 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 ARL10Q8N8L6 244 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 PRELID2Q8N945 189 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 TGFBRAP1Q8WUH2 860 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 CCDC124Q96CT7 223 aaKnown RBP11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 LRRC27Q9C0I9 530 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 EPB41L4BQ9H329 900 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 SMYD3Q9H7B4 428 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 KCNMB3Q9NPA1 279 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 ZDHHC18Q9NUE0 388 aa11.35□□□□□ -0.59
TRAPPC12-223ENST00000497597 MROH5Q6ZUA9 1318 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 LIN7AO14910 233 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 CHMP2AO43633 222 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 DCTN3O75935 186 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 HAUS5O94927 633 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 NPTXRO95502 500 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 GNA14O95837 355 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 SPATA31D3P0C874 917 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 TROVE2P10155 538 aaKnown RBP eCLIP11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 COMTP21964 271 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 NEK3P51956 506 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 KDSRQ06136 332 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 MAP7Q14244 749 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 DCAF12L1Q5VU92 463 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 IRGCQ6NXR0 463 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 LRRC74BQ6ZQY2 392 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 RNF207Q6ZRF8 634 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 SPATA31D4Q6ZUB0 917 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 MIPOL1Q8TD10 442 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 ASAP3Q8TDY4 903 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 FAM210AQ96ND0 272 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 ACP6Q9NPH0 428 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 DCP1AQ9NPI6 582 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 BARHL2Q9NY43 387 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 STK17AQ9UEE5 414 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 TECPR2O15040 1411 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 RARGP13631 454 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 CHRNA3P32297 505 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 CASP5P51878 434 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 ITGA8P53708 1063 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 RCAN1P53805 252 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 DHX34Q14147 1143 aaKnown RBP11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 C2CD6Q53TS8 623 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 PPP1R21Q6ZMI0 780 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 CLEC10AQ8IUN9 316 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 MAML1Q92585 1016 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 PHF12Q96QT6 1004 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 GANQ9H2C0 597 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 BCAS3Q9H6U6 928 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 SUDS3Q9H7L9 328 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 SAYSD1Q9NPB0 183 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 ETNK2Q9NVF9 386 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 AIPL1Q9NZN9 384 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 PNPLA7Q6ZV29 1317 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 MRC1P22897 1456 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 RBAK-RBAKDNI3L0D1 243 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 PODXLO00592 558 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 SUPT3HO75486 399 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 ALADP13716 330 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 SPARCL1Q14515 664 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 RRP1BQ14684 758 aaKnown RBP11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 MTHFD1LQ6UB35 978 aa11.34□□□□□ -0.59
TRAPPC12-223ENST00000497597 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 MAGEA13PA6NCF6 341 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 A6NJR5 290 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 O00370 1275 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 LAD1O00515 517 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 CIB2O75838 187 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms