RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 POLR2FP61218 127 aaKnown RBP12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 C10orf76Q5T2E6 689 aa12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 TADA2BQ86TJ2 420 aa12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 ANKRD13AQ8IZ07 590 aa12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 KAT2BQ92831 832 aa12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 KIFAP3Q92845 792 aa12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 RMI1Q9H9A7 625 aa12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 PKD2L1Q9P0L9 805 aa12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 SLC9A2Q9UBY0 812 aa12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 IGKV6D-21A0A0A0MT36 114 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 USO1O60763 962 aaKnown RBP12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 UCHL3P15374 230 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 CKAP4Q07065 602 aaKnown RBP12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 KIF5AQ12840 1032 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 NEDD9Q14511 834 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 ANO5Q75V66 913 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 RNF10Q8N5U6 811 aaKnown RBP12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 ARL8AQ96BM9 186 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 FRMD4BQ9Y2L6 1034 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 CAPN6Q9Y6Q1 641 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 DOCK5Q9H7D0 1870 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 A0A087WUV0 522 aaPredicted RBP12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 TARSL2A2RTX5 802 aaKnown RBP12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 NCK2O43639 380 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 CNMDO75829 334 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 MOCS3O95396 460 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 YBX3P16989 372 aaKnown RBP eCLIP12.52□□□□□ -0.411e-8■■□□□ 11.7
SNRNP200-208ENST00000497539 MCM3P25205 808 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 DNA2P51530 1060 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 MNAT1P51948 309 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 GNGT1P63211 74 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 MOGSQ13724 837 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 STXBP2Q15833 593 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 ASIC2Q16515 512 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 FBXW10Q5XX13 1052 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 KCTD16Q68DU8 428 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 MIS18BP1Q6P0N0 1132 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 NFRKBQ6P4R8 1299 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 CREG2Q8IUH2 290 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 TSEN2Q8NCE0 465 aaKnown RBP12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 VTI1AQ96AJ9 217 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 CDCA5Q96FF9 252 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 AGAP3Q96P47 875 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 ARPC5LQ9BPX5 153 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 SYT17Q9BSW7 474 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 IFIH1Q9BYX4 1025 aaKnown RBP12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 BTBD7Q9P203 1132 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 AGTPBP1Q9UPW5 1226 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 PPME1Q9Y570 386 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 FAM169AQ9Y6X4 670 aa12.52□□□□□ -0.41
SNRNP200-208ENST00000497539 CLIC2O15247 247 aa12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 SLC25A27O95847 323 aa12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 SUPT20HL2P0C7V6 817 aa12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 PRLRP16471 622 aa12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 NAT1P18440 290 aa12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 FMO5P49326 533 aa12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 ALDH5A1P51649 535 aaPredicted RBP12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 KCTD19Q17RG1 926 aaPredicted RBP12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 C9orf131Q5VYM1 1079 aa12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 INTS8Q75QN2 995 aaKnown RBP12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 IRF2BP2Q7Z5L9 587 aa12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 MAP4K3Q8IVH8 894 aa12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 SH2D3CQ8N5H7 860 aa12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 MCPH1Q8NEM0 835 aa12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 CAPS2Q9BXY5 557 aa12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 LUC7LQ9NQ29 371 aaKnown RBP12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 EXOC7Q9UPT5 735 aa12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 ZNF862O60290 1169 aa12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 DGAT1O75907 488 aa12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 ATP1A2P50993 1020 aa12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 CCNHP51946 323 aaPredicted RBP12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 ACTR2P61160 394 aa12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 SLC18A3Q16572 532 aa12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 HAUS6Q7Z4H7 955 aa12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 FAM133AQ8N9E0 248 aa12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 TRIM58Q8NG06 486 aa12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 AENQ8WTP8 325 aaKnown RBP12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 SPATC1LQ9H0A9 340 aa12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 MCM8Q9UJA3 840 aa12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 MAFBQ9Y5Q3 323 aaPredicted RBP12.51□□□□□ -0.41
SNRNP200-208ENST00000497539 RBM47A0AV96 593 aaKnown RBP12.5□□□□□ -0.41
SNRNP200-208ENST00000497539 H0YCG3 227 aa12.5□□□□□ -0.41
SNRNP200-208ENST00000497539 EBAG9O00559 213 aa12.5□□□□□ -0.41
SNRNP200-208ENST00000497539 NF2P35240 595 aa12.5□□□□□ -0.41
SNRNP200-208ENST00000497539 BFSP1Q12934 665 aa12.5□□□□□ -0.41
SNRNP200-208ENST00000497539 XKR9Q5GH70 373 aa12.5□□□□□ -0.41
SNRNP200-208ENST00000497539 MFSD4BQ5TF39 518 aa12.5□□□□□ -0.41
SNRNP200-208ENST00000497539 ZNF280DQ6N043 979 aa12.5□□□□□ -0.41
SNRNP200-208ENST00000497539 ZNF572Q7Z3I7 529 aaPredicted RBP12.5□□□□□ -0.41
SNRNP200-208ENST00000497539 TMEM161BQ8NDZ6 487 aa12.5□□□□□ -0.41
SNRNP200-208ENST00000497539 MICAL1Q8TDZ2 1067 aa12.5□□□□□ -0.41
SNRNP200-208ENST00000497539 SYNGAP1Q96PV0 1343 aa12.5□□□□□ -0.41
SNRNP200-208ENST00000497539 TMCO5BA8MYB1 307 aa12.5□□□□□ -0.41
SNRNP200-208ENST00000497539 AKR1B10O60218 316 aa12.5□□□□□ -0.41
SNRNP200-208ENST00000497539 ERLIN2O94905 339 aa12.5□□□□□ -0.41
SNRNP200-208ENST00000497539 PECAM1P16284 738 aaPredicted RBP12.5□□□□□ -0.41
SNRNP200-208ENST00000497539 SLC9A1P19634 815 aa12.5□□□□□ -0.41
SNRNP200-208ENST00000497539 PDCLQ13371 301 aa12.5□□□□□ -0.41
SNRNP200-208ENST00000497539 XKR3Q5GH77 459 aa12.5□□□□□ -0.41
SNRNP200-208ENST00000497539 MORC4Q8TE76 937 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms