RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 P4HA2O15460 535 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 USO1O60763 962 aaKnown RBP6.95□□□□□ -1.3
BRCA1-224ENST00000497488 WISP1O95388 367 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 DNTTP04053 509 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 KITP10721 976 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 MYCLP12524 364 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-224ENST00000497488 AKR1B1P15121 316 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 HTRA4P83105 476 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-224ENST00000497488 NOGQ13253 232 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 TRPC3Q13507 836 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 LAPTM5Q13571 262 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 SPIDRQ14159 915 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 PTK2BQ14289 1009 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 PSMD6Q15008 389 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 ADRM1Q16186 407 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 CFAP58Q5T655 872 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 CNKSR3Q6P9H4 555 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 KIAA1211Q6ZU35 1233 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 C8orf86Q6ZUL3 223 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 TTC7BQ86TV6 843 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 NPAS3Q8IXF0 933 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 NRSN1Q8IZ57 195 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 NLGN4XQ8N0W4 816 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 NDUFAF2Q8N183 169 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 Q8N1Y9 231 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 TSPYL6Q8N831 410 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 FANCBQ8NB91 859 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 DCAF11Q8TEB1 546 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 RFFLQ8WZ73 363 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 DPF3Q92784 378 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 DPF2Q92785 391 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 ATP6V1E2Q96A05 226 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 SLC35A4Q96G79 324 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 CD244Q9BZW8 370 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 SENP6Q9GZR1 1112 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-224ENST00000497488 DHX36Q9H2U1 1008 aaKnown RBP6.95□□□□□ -1.3
BRCA1-224ENST00000497488 CPNE7Q9UBL6 633 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 GGA1Q9UJY5 639 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 DSEQ9UL01 958 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 PCDHB1Q9Y5F3 818 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-224ENST00000497488 TSPY2A6NKD2 308 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 AQP12BA6NM10 295 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 TADA3O75528 432 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 EOMESO95936 686 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 TSPY3P0CV98 308 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 TSPY8P0CW00 308 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 HOXC13P31276 330 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 CTNNA1P35221 906 aaKnown RBP6.94□□□□□ -1.3
BRCA1-224ENST00000497488 SUMO3P55854 103 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-224ENST00000497488 TSPY1Q01534 308 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 NRG1Q02297 640 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-224ENST00000497488 MAPK7Q13164 816 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 EFR3AQ14156 821 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 KRT32Q14532 448 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 PLCB4Q15147 1175 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 ADCK5Q3MIX3 580 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 SLC10A5Q5PT55 438 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 LIN54Q6MZP7 749 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 CEP68Q76N32 757 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 MIGA2Q7L4E1 593 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 TMC6Q7Z403 805 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 FTSJ3Q8IY81 847 aaKnown RBP6.94□□□□□ -1.3
BRCA1-224ENST00000497488 ZNF713Q8N859 430 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-224ENST00000497488 C12orf50Q8NA57 414 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-224ENST00000497488 PIP4K2CQ8TBX8 421 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 FAM71BQ8TC56 605 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 ATRIPQ8WXE1 791 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 FATE1Q969F0 183 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 RILPL2Q969X0 211 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 C7orf26Q96N11 449 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 MYL10Q9BUA6 226 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 EPB41L1Q9H4G0 881 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 PREBQ9HCU5 417 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 PLSCR4Q9NRQ2 329 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 NUB1Q9Y5A7 615 aa6.94□□□□□ -1.3
BRCA1-224ENST00000497488 ST20-MTHFSA0A0A6YYL1 179 aa6.93□□□□□ -1.3
BRCA1-224ENST00000497488 A0A0B4J269 797 aa6.93□□□□□ -1.3
BRCA1-224ENST00000497488 CDC14CA4D256 554 aa6.93□□□□□ -1.3
BRCA1-224ENST00000497488 PABPN1LA6NDY0 278 aaKnown RBP6.93□□□□□ -1.3
BRCA1-224ENST00000497488 LRRC14BA6NHZ5 514 aa6.93□□□□□ -1.3
BRCA1-224ENST00000497488 H3BUI4 141 aa6.93□□□□□ -1.3
BRCA1-224ENST00000497488 M0R082 166 aa6.93□□□□□ -1.3
BRCA1-224ENST00000497488 DKC1O60832 514 aaKnown RBP eCLIP6.93□□□□□ -1.3
BRCA1-224ENST00000497488 PRPF6O94906 941 aaKnown RBP6.93□□□□□ -1.3
BRCA1-224ENST00000497488 RPLP2P05387 115 aaKnown RBP6.93□□□□□ -1.3
BRCA1-224ENST00000497488 HNRNPCP07910 306 aaKnown RBP eCLIP6.93□□□□□ -1.3
BRCA1-224ENST00000497488 NPR1P16066 1061 aa6.93□□□□□ -1.3
BRCA1-224ENST00000497488 MCAMP43121 646 aa6.93□□□□□ -1.3
BRCA1-224ENST00000497488 VAMP2P63027 116 aa6.93□□□□□ -1.3
BRCA1-224ENST00000497488 LRP8Q14114 963 aa6.93□□□□□ -1.3
BRCA1-224ENST00000497488 PLS1Q14651 629 aa6.93□□□□□ -1.3
BRCA1-224ENST00000497488 NR0B2Q15466 257 aa6.93□□□□□ -1.3
BRCA1-224ENST00000497488 SURF1Q15526 300 aa6.93□□□□□ -1.3
BRCA1-224ENST00000497488 LMBRD2Q68DH5 695 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-224ENST00000497488 TIGD7Q6NT04 549 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-224ENST00000497488 CCDC129Q6ZRS4 1044 aa6.93□□□□□ -1.3
BRCA1-224ENST00000497488 C2CD5Q86YS7 1000 aa6.93□□□□□ -1.3
BRCA1-224ENST00000497488 HERC6Q8IVU3 1022 aa6.93□□□□□ -1.3
BRCA1-224ENST00000497488 DMRTC2Q8IXT2 367 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms