RNA–Protein interactions for RNA: ENST00000497469.5

RNF220-218, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-218ENST00000497469 C22orf31O95567 290 aa16.16■□□□□ 0.18
RNF220-218ENST00000497469 PHKA2P46019 1235 aa16.16■□□□□ 0.18
RNF220-218ENST00000497469 SRSF1Q07955 248 aaKnown RBP eCLIP16.16■□□□□ 0.18
RNF220-218ENST00000497469 LILRA6Q6PI73 481 aa16.16■□□□□ 0.18
RNF220-218ENST00000497469 PLPPR4Q7Z2D5 763 aa16.16■□□□□ 0.18
RNF220-218ENST00000497469 MTMR8Q96EF0 704 aa16.16■□□□□ 0.18
RNF220-218ENST00000497469 STK39Q9UEW8 545 aa16.16■□□□□ 0.18
RNF220-218ENST00000497469 MTCL1Q9Y4B5 1905 aaKnown RBP16.15■□□□□ 0.18
RNF220-218ENST00000497469 SPTA1P02549 2419 aa16.15■□□□□ 0.18
RNF220-218ENST00000497469 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.15■□□□□ 0.18
RNF220-218ENST00000497469 NRG2O14511 850 aaPredicted RBP16.15■□□□□ 0.18
RNF220-218ENST00000497469 MAP3K13O43283 966 aa16.15■□□□□ 0.18
RNF220-218ENST00000497469 EXTL3O43909 919 aa16.15■□□□□ 0.18
RNF220-218ENST00000497469 ACTR2P61160 394 aa16.15■□□□□ 0.18
RNF220-218ENST00000497469 SLC35G1Q2M3R5 365 aa16.15■□□□□ 0.18
RNF220-218ENST00000497469 PLK5Q496M5 336 aa16.15■□□□□ 0.18
RNF220-218ENST00000497469 USP17L6PQ6QN14 398 aa16.15■□□□□ 0.18
RNF220-218ENST00000497469 TRMT1LQ7Z2T5 733 aaKnown RBP16.15■□□□□ 0.18
RNF220-218ENST00000497469 MIER1Q8N108 512 aa16.15■□□□□ 0.18
RNF220-218ENST00000497469 PIGSQ96S52 555 aa16.15■□□□□ 0.18
RNF220-218ENST00000497469 SLC9A2Q9UBY0 812 aa16.15■□□□□ 0.18
RNF220-218ENST00000497469 AKT3Q9Y243 479 aa16.15■□□□□ 0.18
RNF220-218ENST00000497469 SSX2IPQ9Y2D8 614 aa16.15■□□□□ 0.18
RNF220-218ENST00000497469 NEDD4P46934 1319 aa16.15■□□□□ 0.18
RNF220-218ENST00000497469 CACNA1EQ15878 2313 aa16.14■□□□□ 0.18
RNF220-218ENST00000497469 ATXN7O15265 892 aaPredicted RBP16.14■□□□□ 0.17
RNF220-218ENST00000497469 ALDH2P05091 517 aa16.14■□□□□ 0.17
RNF220-218ENST00000497469 EIF4BP23588 611 aaKnown RBP16.14■□□□□ 0.17
RNF220-218ENST00000497469 FAM193AP78312 1265 aa16.14■□□□□ 0.17
RNF220-218ENST00000497469 DSG1Q02413 1049 aa16.14■□□□□ 0.17
RNF220-218ENST00000497469 MTMR1Q13613 665 aa16.14■□□□□ 0.17
RNF220-218ENST00000497469 LRRC32Q14392 662 aa16.14■□□□□ 0.17
RNF220-218ENST00000497469 TBC1D10CQ8IV04 446 aa16.14■□□□□ 0.17
RNF220-218ENST00000497469 SIRT2Q8IXJ6 389 aa16.14■□□□□ 0.17
RNF220-218ENST00000497469 DUSP15Q9H1R2 295 aaPredicted RBP16.14■□□□□ 0.17
RNF220-218ENST00000497469 SLC32A1Q9H598 525 aa16.14■□□□□ 0.17
RNF220-218ENST00000497469 DACT1Q9NYF0 836 aa16.14■□□□□ 0.17
RNF220-218ENST00000497469 WDR81Q562E7 1941 aa16.13■□□□□ 0.17
RNF220-218ENST00000497469 TK2O00142 265 aa16.13■□□□□ 0.17
RNF220-218ENST00000497469 DCLK1O15075 740 aa16.13■□□□□ 0.17
RNF220-218ENST00000497469 HBP1O60381 514 aa16.13■□□□□ 0.17
RNF220-218ENST00000497469 SOX9P48436 509 aa16.13■□□□□ 0.17
RNF220-218ENST00000497469 PPM1LQ5SGD2 360 aa16.13■□□□□ 0.17
RNF220-218ENST00000497469 DGKHQ86XP1 1220 aa16.13■□□□□ 0.17
RNF220-218ENST00000497469 CDHR1Q96JP9 859 aa16.13■□□□□ 0.17
RNF220-218ENST00000497469 ZC3H10Q96K80 434 aaKnown RBP16.13■□□□□ 0.17
RNF220-218ENST00000497469 SCLT1Q96NL6 688 aa16.13■□□□□ 0.17
RNF220-218ENST00000497469 FAM193BQ96PV7 902 aaPredicted RBP16.13■□□□□ 0.17
RNF220-218ENST00000497469 ZNF334Q9HCZ1 680 aaPredicted RBP16.13■□□□□ 0.17
RNF220-218ENST00000497469 ACACAQ13085 2346 aa16.13■□□□□ 0.17
RNF220-218ENST00000497469 SHROOM3Q8TF72 1996 aa16.13■□□□□ 0.17
RNF220-218ENST00000497469 BCLAF3A2AJT9 711 aaKnown RBP16.12■□□□□ 0.17
RNF220-218ENST00000497469 KLRF2D3W0D1 207 aa16.12■□□□□ 0.17
RNF220-218ENST00000497469 POMCP01189 267 aa16.12■□□□□ 0.17
RNF220-218ENST00000497469 C8AP07357 584 aa16.12■□□□□ 0.17
RNF220-218ENST00000497469 FCARP24071 287 aa16.12■□□□□ 0.17
RNF220-218ENST00000497469 GDI1P31150 447 aa16.12■□□□□ 0.17
RNF220-218ENST00000497469 HOXA6P31267 233 aa16.12■□□□□ 0.17
RNF220-218ENST00000497469 PABPC1LQ4VXU2 614 aaKnown RBP16.12■□□□□ 0.17
RNF220-218ENST00000497469 LIN9Q5TKA1 542 aa16.12■□□□□ 0.17
RNF220-218ENST00000497469 TWF2Q6IBS0 349 aaKnown RBP16.12■□□□□ 0.17
RNF220-218ENST00000497469 PKN3Q6P5Z2 889 aa16.12■□□□□ 0.17
RNF220-218ENST00000497469 RAB44Q7Z6P3 723 aaPredicted RBP16.12■□□□□ 0.17
RNF220-218ENST00000497469 RNF168Q8IYW5 571 aaPredicted RBP16.12■□□□□ 0.17
RNF220-218ENST00000497469 LRRC71Q8N4P6 559 aa16.12■□□□□ 0.17
RNF220-218ENST00000497469 SMARCC2Q8TAQ2 1214 aa16.12■□□□□ 0.17
RNF220-218ENST00000497469 URGCPQ8TCY9 931 aa16.12■□□□□ 0.17
RNF220-218ENST00000497469 PIBF1Q8WXW3 757 aa16.12■□□□□ 0.17
RNF220-218ENST00000497469 ELSPBP1Q96BH3 223 aa16.12■□□□□ 0.17
RNF220-218ENST00000497469 TRMT61BQ9BVS5 477 aaKnown RBP16.12■□□□□ 0.17
RNF220-218ENST00000497469 FBXW11Q9UKB1 542 aa16.12■□□□□ 0.17
RNF220-218ENST00000497469 TEX15Q9BXT5 2789 aa16.11■□□□□ 0.17
RNF220-218ENST00000497469 BACH1O14867 736 aa16.11■□□□□ 0.17
RNF220-218ENST00000497469 KHNYNO15037 678 aaKnown RBP16.11■□□□□ 0.17
RNF220-218ENST00000497469 FGAP02671 866 aa16.11■□□□□ 0.17
RNF220-218ENST00000497469 DARSP14868 501 aaKnown RBP16.11■□□□□ 0.17
RNF220-218ENST00000497469 CEBPBP17676 345 aa16.11■□□□□ 0.17
RNF220-218ENST00000497469 OR1G1P47890 313 aa16.11■□□□□ 0.17
RNF220-218ENST00000497469 SLC5A9Q2M3M2 681 aa16.11■□□□□ 0.17
RNF220-218ENST00000497469 MFSD6Q6ZSS7 791 aa16.11■□□□□ 0.17
RNF220-218ENST00000497469 TMEM175Q9BSA9 504 aa16.11■□□□□ 0.17
RNF220-218ENST00000497469 DNMT3BQ9UBC3 853 aaKnown RBP16.11■□□□□ 0.17
RNF220-218ENST00000497469 MRPS23Q9Y3D9 190 aaKnown RBP16.11■□□□□ 0.17
RNF220-218ENST00000497469 COL1A2P08123 1366 aa16.11■□□□□ 0.17
RNF220-218ENST00000497469 ASCC3Q8N3C0 2202 aaKnown RBP16.1■□□□□ 0.17
RNF220-218ENST00000497469 H0Y626 953 aa16.1■□□□□ 0.17
RNF220-218ENST00000497469 TRIM16O95361 564 aa16.1■□□□□ 0.17
RNF220-218ENST00000497469 MAPK8P45983 427 aa16.1■□□□□ 0.17
RNF220-218ENST00000497469 ZNF484Q5JVG2 852 aa16.1■□□□□ 0.17
RNF220-218ENST00000497469 PRSS55Q6UWB4 352 aaPredicted RBP16.1■□□□□ 0.17
RNF220-218ENST00000497469 MAP4K3Q8IVH8 894 aa16.1■□□□□ 0.17
RNF220-218ENST00000497469 IRF7Q92985 503 aa16.1■□□□□ 0.17
RNF220-218ENST00000497469 MBOAT7Q96N66 472 aa16.1■□□□□ 0.17
RNF220-218ENST00000497469 POLR3BQ9NW08 1133 aaPredicted RBP16.1■□□□□ 0.17
RNF220-218ENST00000497469 UBIAD1Q9Y5Z9 338 aa16.1■□□□□ 0.17
RNF220-218ENST00000497469 NOTCH4Q99466 2003 aa16.1■□□□□ 0.17
RNF220-218ENST00000497469 EML5Q05BV3 1969 aa16.09■□□□□ 0.17
RNF220-218ENST00000497469 SLC38A8A6NNN8 435 aa16.09■□□□□ 0.17
RNF220-218ENST00000497469 CCER2I3L3R5 266 aa16.09■□□□□ 0.17
RNF220-218ENST00000497469 XYLBO75191 536 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms