RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 PTPRUQ92729 1446 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 RGPD3A6NKT7 1758 aaPredicted RBP4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 RGPD4Q7Z3J3 1758 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 NEMP1O14524 444 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 FBXO21O94952 628 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 NCAM1P13591 858 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 TYRP1P17643 537 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 GJA4P35212 333 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 ECE1P42892 770 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 GEMIN4P57678 1058 aaKnown RBP4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 CHAF1AQ13111 956 aaPredicted RBP4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 ADAM9Q13443 819 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 GBX1Q14549 363 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 SSPNQ14714 243 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 SLC15A2Q16348 729 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 ARHGAP44Q17R89 818 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 ABCB5Q2M3G0 1257 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 CD276Q5ZPR3 534 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 SKAP1Q86WV1 359 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 SUGP1Q8IWZ8 645 aaKnown RBP4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 DRC7Q8IY82 874 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 IFNL2Q8IZJ0 200 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 CBARPQ8N350 705 aaPredicted RBP4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 AFAP1Q8N556 730 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 LINC00482Q8N8I6 264 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 SMARCC2Q8TAQ2 1214 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 PARD3BQ8TEW8 1205 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 CHTF18Q8WVB6 975 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 GJA10Q969M2 543 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 FOXRED1Q96CU9 486 aaPredicted RBP4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 TOE1Q96GM8 510 aaKnown RBP4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 NOX5Q96PH1 765 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 GORASP1Q9BQQ3 440 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 SELENOOQ9BVL4 669 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 ANLNQ9NQW6 1124 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 SPTLC3Q9NUV7 552 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 SIRT5Q9NXA8 310 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 SAGE1Q9NXZ1 904 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 LUC7L2Q9Y383 392 aaKnown RBP4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 RNF114Q9Y508 228 aa4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 MORC2Q9Y6X9 1032 aaPredicted RBP4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 TEP1Q99973 2627 aaKnown RBP4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 GPATCH8Q9UKJ3 1502 aaKnown RBP4.45□□□□□ -1.7
EXOSC3-208ENST00000496910 CFAP54Q96N23 3096 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 NLRP1Q9C000 1473 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 LTBP1Q14766 1721 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 LAMA3Q16787 3333 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 FZD9O00144 591 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 SCDO00767 359 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 PMM2O15305 246 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 BRINP1O60477 761 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 TSPAN15O95858 294 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 C1QTNF9P0C862 333 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 PHKG2P15735 406 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 PTX3P26022 381 aaPredicted RBP4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 AOAHP28039 575 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 POLD1P28340 1107 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 LSSP48449 732 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 ITGA1P56199 1179 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 HERVK_113P62684 666 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 GPSM2P81274 684 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 DBPQ10586 325 aaPredicted RBP4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 SAFBQ15424 915 aaKnown RBP eCLIP4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 TARBP2Q15633 366 aaKnown RBP4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 PTPN21Q16825 1174 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 MINDY4Q4G0A6 757 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 CCDC93Q567U6 631 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 ZNF648Q5T619 568 aaPredicted RBP4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 BTBD8Q5XKL5 378 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 CC2D1AQ6P1N0 951 aaPredicted RBP4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 XRRA1Q6P2D8 792 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 LVRNQ6Q4G3 990 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 RINLQ6ZS11 566 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 SYDE1Q6ZW31 735 aaPredicted RBP4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 EPM2AIP1Q7L775 607 aaPredicted RBP4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 RTN4RL1Q86UN2 441 aaPredicted RBP4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 CLASRPQ8N2M8 674 aaKnown RBP4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 SDR16C5Q8N3Y7 309 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 DTX3Q8N9I9 347 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 BHLHE22Q8NFJ8 381 aaPredicted RBP4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 FAM84AQ96KN4 292 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 C16orf92Q96LL3 132 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 ELF4Q99607 663 aaPredicted RBP4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 ZMAT4Q9H898 229 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 CABP5Q9NP86 173 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 ASH1LQ9NR48 2969 aaKnown RBP4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 KCNH7Q9NS40 1196 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 STK32BQ9NY57 414 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 SPO11Q9Y5K1 396 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 KCPQ6ZWJ8 1503 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 PRUNE2Q8WUY3 3088 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 KIF7Q2M1P5 1343 aa4.44□□□□□ -1.7
EXOSC3-208ENST00000496910 MYOM2P54296 1465 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 ZNF839A8K0R7 811 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 PRKD3O94806 890 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 FARP2O94887 1054 aaPredicted RBP4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 FKBP9O95302 570 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 MMEP08473 750 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 PF4V1P10720 104 aa4.43□□□□□ -1.7
EXOSC3-208ENST00000496910 LPOP22079 712 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms