RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 AGO3Q9H9G7 860 aaKnown RBP20■□□□□ 0.79
RGP1-202ENST00000496906 AGPAT5Q9NUQ2 364 aa20■□□□□ 0.79
RGP1-202ENST00000496906 TNFSF13BQ9Y275 285 aa20■□□□□ 0.79
RGP1-202ENST00000496906 RBAK-RBAKDNI3L0D1 243 aa20■□□□□ 0.79
RGP1-202ENST00000496906 ABLIM1O14639 778 aa20■□□□□ 0.79
RGP1-202ENST00000496906 CLIC2O15247 247 aa20■□□□□ 0.79
RGP1-202ENST00000496906 TOM1L1O75674 476 aa20■□□□□ 0.79
RGP1-202ENST00000496906 NR3C1P04150 777 aa20■□□□□ 0.79
RGP1-202ENST00000496906 PROZP22891 400 aa20■□□□□ 0.79
RGP1-202ENST00000496906 HOXA11P31270 313 aaPredicted RBP20■□□□□ 0.79
RGP1-202ENST00000496906 SPATA1Q5VX52 437 aa20■□□□□ 0.79
RGP1-202ENST00000496906 LRRC55Q6ZSA7 311 aa20■□□□□ 0.79
RGP1-202ENST00000496906 LUZP1Q86V48 1076 aa20■□□□□ 0.79
RGP1-202ENST00000496906 RNF214Q8ND24 703 aa20■□□□□ 0.79
RGP1-202ENST00000496906 TMEM174Q8WUU8 243 aa20■□□□□ 0.79
RGP1-202ENST00000496906 CPB2Q96IY4 423 aa20■□□□□ 0.79
RGP1-202ENST00000496906 CBWD1Q9BRT8 395 aa20■□□□□ 0.79
RGP1-202ENST00000496906 PPP1R12CQ9BZL4 782 aa20■□□□□ 0.79
RGP1-202ENST00000496906 WNT8AQ9H1J5 351 aa20■□□□□ 0.79
RGP1-202ENST00000496906 PTPRHQ9HD43 1115 aa20■□□□□ 0.79
RGP1-202ENST00000496906 NFE2L3Q9Y4A8 694 aa20■□□□□ 0.79
RGP1-202ENST00000496906 A0A1B0GUA9 196 aa19.99■□□□□ 0.79
RGP1-202ENST00000496906 GPR182O15218 404 aa19.99■□□□□ 0.79
RGP1-202ENST00000496906 GARTP22102 1010 aa19.99■□□□□ 0.79
RGP1-202ENST00000496906 NR2F2P24468 414 aa19.99■□□□□ 0.79
RGP1-202ENST00000496906 AXLP30530 894 aa19.99■□□□□ 0.79
RGP1-202ENST00000496906 FKBP3Q00688 224 aaKnown RBP19.99■□□□□ 0.79
RGP1-202ENST00000496906 TMEM132AQ24JP5 1023 aa19.99■□□□□ 0.79
RGP1-202ENST00000496906 ARMCX5Q6P1M9 558 aa19.99■□□□□ 0.79
RGP1-202ENST00000496906 SLC9A9Q8IVB4 645 aa19.99■□□□□ 0.79
RGP1-202ENST00000496906 CSGALNACT2Q8N6G5 542 aa19.99■□□□□ 0.79
RGP1-202ENST00000496906 ZBTB45Q96K62 511 aaPredicted RBP19.99■□□□□ 0.79
RGP1-202ENST00000496906 HAPLN2Q9GZV7 340 aa19.99■□□□□ 0.79
RGP1-202ENST00000496906 RBSNQ9H1K0 784 aa19.99■□□□□ 0.79
RGP1-202ENST00000496906 PDZD7Q9H5P4 517 aa19.99■□□□□ 0.79
RGP1-202ENST00000496906 ERVK-5Q9HDB9 667 aa19.99■□□□□ 0.79
RGP1-202ENST00000496906 DMAC2Q9NW81 257 aa19.99■□□□□ 0.79
RGP1-202ENST00000496906 ANKFY1Q9P2R3 1169 aa19.99■□□□□ 0.79
RGP1-202ENST00000496906 ST3GAL5Q9UNP4 418 aa19.99■□□□□ 0.79
RGP1-202ENST00000496906 SMTNL1A8MU46 457 aa19.98■□□□□ 0.79
RGP1-202ENST00000496906 BECN2A8MW95 431 aa19.98■□□□□ 0.79
RGP1-202ENST00000496906 CD52P31358 61 aa19.98■□□□□ 0.79
RGP1-202ENST00000496906 NCBP1Q09161 790 aaKnown RBP19.98■□□□□ 0.79
RGP1-202ENST00000496906 PAK2Q13177 524 aa19.98■□□□□ 0.79
RGP1-202ENST00000496906 ADAM9Q13443 819 aa19.98■□□□□ 0.79
RGP1-202ENST00000496906 MYBPC2Q14324 1141 aa19.98■□□□□ 0.79
RGP1-202ENST00000496906 GPNMBQ14956 572 aa19.98■□□□□ 0.79
RGP1-202ENST00000496906 EEF1DP3Q658K8 133 aa19.98■□□□□ 0.79
RGP1-202ENST00000496906 SLFN12LQ6IEE8 588 aa19.98■□□□□ 0.79
RGP1-202ENST00000496906 MPZL3Q6UWV2 235 aa19.98■□□□□ 0.79
RGP1-202ENST00000496906 CDR2LQ86X02 465 aaPredicted RBP19.98■□□□□ 0.79
RGP1-202ENST00000496906 POMGNT1Q8WZA1 660 aa19.98■□□□□ 0.79
RGP1-202ENST00000496906 PADI3Q9ULW8 664 aa19.98■□□□□ 0.79
RGP1-202ENST00000496906 PIN4Q9Y237 131 aaKnown RBP19.98■□□□□ 0.79
RGP1-202ENST00000496906 TANC1Q9C0D5 1861 aa19.98■□□□□ 0.79
RGP1-202ENST00000496906 TRIM43BA6NCK2 446 aa19.97■□□□□ 0.79
RGP1-202ENST00000496906 KIAA0355O15063 1070 aa19.97■□□□□ 0.79
RGP1-202ENST00000496906 CLDN3O15551 220 aa19.97■□□□□ 0.79
RGP1-202ENST00000496906 NBNO60934 754 aa19.97■□□□□ 0.79
RGP1-202ENST00000496906 RPL13P26373 211 aaKnown RBP19.97■□□□□ 0.79
RGP1-202ENST00000496906 CYP2C18P33260 490 aa19.97■□□□□ 0.79
RGP1-202ENST00000496906 MCL1Q07820 350 aa19.97■□□□□ 0.79
RGP1-202ENST00000496906 NFX1Q12986 1120 aaKnown RBP19.97■□□□□ 0.79
RGP1-202ENST00000496906 TPD52L1Q16890 204 aaPredicted RBP19.97■□□□□ 0.79
RGP1-202ENST00000496906 NOTUMQ6P988 496 aa19.97■□□□□ 0.79
RGP1-202ENST00000496906 TRIM43Q96BQ3 446 aaPredicted RBP19.97■□□□□ 0.79
RGP1-202ENST00000496906 EEF2KMTQ96G04 330 aa19.97■□□□□ 0.79
RGP1-202ENST00000496906 SRRTQ9BXP5 876 aaKnown RBP19.97■□□□□ 0.79
RGP1-202ENST00000496906 HSD3B7Q9H2F3 369 aa19.97■□□□□ 0.79
RGP1-202ENST00000496906 PCIF1Q9H4Z3 704 aa19.97■□□□□ 0.79
RGP1-202ENST00000496906 HSPBP1Q9NZL4 362 aa19.97■□□□□ 0.79
RGP1-202ENST00000496906 A0A0B4J269 797 aa19.96■□□□□ 0.79
RGP1-202ENST00000496906 N4BP3O15049 544 aa19.96■□□□□ 0.79
RGP1-202ENST00000496906 PARNO95453 639 aaKnown RBP19.96■□□□□ 0.79
RGP1-202ENST00000496906 CYP2J2P51589 502 aa19.96■□□□□ 0.79
RGP1-202ENST00000496906 CCL23P55773 120 aa19.96■□□□□ 0.79
RGP1-202ENST00000496906 NOLC1Q14978 699 aaKnown RBP eCLIP19.96■□□□□ 0.79
RGP1-202ENST00000496906 ZNF568Q3ZCX4 644 aa19.96■□□□□ 0.79
RGP1-202ENST00000496906 SCLYQ96I15 445 aa19.96■□□□□ 0.79
RGP1-202ENST00000496906 CEP63Q96MT8 703 aa19.96■□□□□ 0.79
RGP1-202ENST00000496906 CDT1Q9H211 546 aa19.96■□□□□ 0.79
RGP1-202ENST00000496906 PRDM5Q9NQX1 630 aaPredicted RBP19.96■□□□□ 0.79
RGP1-202ENST00000496906 SAMSN1Q9NSI8 373 aaKnown RBP19.96■□□□□ 0.79
RGP1-202ENST00000496906 FANCLQ9NW38 375 aa19.96■□□□□ 0.79
RGP1-202ENST00000496906 ALPK3Q96L96 1907 aa19.96■□□□□ 0.79
RGP1-202ENST00000496906 CETN3O15182 167 aa19.95■□□□□ 0.78
RGP1-202ENST00000496906 NOC3LQ8WTT2 800 aaKnown RBP19.95■□□□□ 0.78
RGP1-202ENST00000496906 CCDC51Q96ER9 411 aa19.95■□□□□ 0.78
RGP1-202ENST00000496906 TCHPQ9BT92 498 aa19.95■□□□□ 0.78
RGP1-202ENST00000496906 MSTO1Q9BUK6 570 aa19.95■□□□□ 0.78
RGP1-202ENST00000496906 IFIH1Q9BYX4 1025 aaKnown RBP19.95■□□□□ 0.78
RGP1-202ENST00000496906 THAP9Q9H5L6 903 aa19.95■□□□□ 0.78
RGP1-202ENST00000496906 CHST12Q9NRB3 414 aa19.95■□□□□ 0.78
RGP1-202ENST00000496906 KIAA0391O15091 583 aaKnown RBP19.95■□□□□ 0.78
RGP1-202ENST00000496906 TIMP1P01033 207 aa19.95■□□□□ 0.78
RGP1-202ENST00000496906 ITGB8P26012 769 aa19.95■□□□□ 0.78
RGP1-202ENST00000496906 MATR3P43243 847 aaKnown RBP eCLIP19.95■□□□□ 0.78
RGP1-202ENST00000496906 CASP4P49662 377 aa19.95■□□□□ 0.78
RGP1-202ENST00000496906 CDKAL1Q5VV42 579 aa19.95■□□□□ 0.78
RGP1-202ENST00000496906 SLC27A1Q6PCB7 646 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms