RNA–Protein interactions for RNA: ENST00000496804.5

MACF1-224, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 5,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-224ENST00000496804 CRB1P82279 1406 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 PXDNLA1KZ92 1463 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 SMIM31A0A1B0GVY4 71 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 SPDYE5A6NIY4 337 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 PYGBP11216 843 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 MTTPP55157 894 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 ARL4CP56559 192 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 CYFIP1Q7L576 1253 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 THEMISQ8N1K5 641 aaPredicted RBP9.36□□□□□ -0.91
MACF1-224ENST00000496804 RNF169Q8NCN4 708 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 UPF3AQ9H1J1 476 aaKnown RBP9.36□□□□□ -0.91
MACF1-224ENST00000496804 KANSL2Q9H9L4 492 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 SPC25Q9HBM1 224 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 PRDM11Q9NQV5 511 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 CNGB3Q9NQW8 809 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 CCDC195A0A1B0GUA6 201 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 FKBP6O75344 327 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 GOLGA8HP0CJ92 632 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 PIK3CAP42336 1068 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 CCDC15Q0P6D6 951 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 OVGP1Q12889 678 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 TRMT5Q32P41 509 aaKnown RBP9.36□□□□□ -0.91
MACF1-224ENST00000496804 LRRC8BQ6P9F7 803 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 RSBN1LQ6PCB5 846 aaPredicted RBP9.36□□□□□ -0.91
MACF1-224ENST00000496804 NSMFQ6X4W1 530 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 DDX28Q9NUL7 540 aaKnown RBP9.36□□□□□ -0.91
MACF1-224ENST00000496804 NMRK1Q9NWW6 199 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 TTC7AQ9ULT0 858 aaPredicted RBP9.36□□□□□ -0.91
MACF1-224ENST00000496804 REXO2Q9Y3B8 237 aaKnown RBP9.36□□□□□ -0.91
MACF1-224ENST00000496804 SALL1Q9NSC2 1324 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 PLEKHG3A1L390 1219 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 RCCD1A6NED2 376 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 GOLGA8RI6L899 631 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 SHBGP04278 402 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 SKIV2L2P42285 1042 aaKnown RBP9.36□□□□□ -0.91
MACF1-224ENST00000496804 MAGEA8P43361 318 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 TOB1P50616 345 aaPredicted RBP9.36□□□□□ -0.91
MACF1-224ENST00000496804 USP46P62068 366 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 SPDYCQ5MJ68 293 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 C1orf228Q6PIY5 440 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 CROCCP3Q8IVE0 287 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 GALNT4Q8N4A0 578 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 TRIM11Q96F44 468 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 RBM15Q96T37 977 aaKnown RBP eCLIP9.36□□□□□ -0.91
MACF1-224ENST00000496804 CCSER1Q9C0I3 900 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 MROH5Q6ZUA9 1318 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 ABCC3O15438 1527 aa9.36□□□□□ -0.91
MACF1-224ENST00000496804 FAM237AA0A1B0GTK4 181 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 PFASO15067 1338 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 LSM1O15116 133 aaKnown RBP9.35□□□□□ -0.91
MACF1-224ENST00000496804 MFAP3P55082 362 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 BASP1P80723 227 aaKnown RBP9.35□□□□□ -0.91
MACF1-224ENST00000496804 PTK2Q05397 1052 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 FAM178BQ8IXR5 827 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 IGDCC4Q8TDY8 1250 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 ZFAND2BQ8WV99 257 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 ABHD8Q96I13 439 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 KLHL25Q9H0H3 589 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 KIF1BO60333 1816 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 FAM196BA6NMK8 535 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 ITGA4P13612 1032 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 NUP107P57740 925 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 PDIA2Q13087 525 aaKnown RBP9.35□□□□□ -0.91
MACF1-224ENST00000496804 CNGA2Q16280 664 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 PARP6Q2NL67 630 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 IYDQ6PHW0 289 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 CLEC4GQ6UXB4 293 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 SYDE1Q6ZW31 735 aaPredicted RBP9.35□□□□□ -0.91
MACF1-224ENST00000496804 LRRC6Q86X45 466 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 SDCCAG3Q96C92 435 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 ZNF570Q96NI8 536 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 MRPL1Q9BYD6 325 aaKnown RBP9.35□□□□□ -0.91
MACF1-224ENST00000496804 ATP8A2Q9NTI2 1148 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 THRAP3Q9Y2W1 955 aaKnown RBP9.35□□□□□ -0.91
MACF1-224ENST00000496804 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.35□□□□□ -0.91
MACF1-224ENST00000496804 CFAP65Q6ZU64 1925 aaKnown RBP9.35□□□□□ -0.91
MACF1-224ENST00000496804 PABPC4Q13310 644 aaKnown RBP eCLIP9.35□□□□□ -0.91
MACF1-224ENST00000496804 RNF43Q68DV7 783 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 TTI2Q6NXR4 508 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 LCORLQ8N3X6 602 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 MARCH10Q8NA82 808 aaPredicted RBP9.35□□□□□ -0.91
MACF1-224ENST00000496804 KCNK16Q96T55 309 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 MTA3Q9BTC8 594 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 PACSIN1Q9BY11 444 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 MANSC1Q9H8J5 431 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 PIH1D3Q9NQM4 214 aaKnown RBP9.35□□□□□ -0.91
MACF1-224ENST00000496804 CROCC2H7BZ55 1655 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 PJA2O43164 708 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 FTLP02792 175 aaPredicted RBP9.35□□□□□ -0.91
MACF1-224ENST00000496804 KRT8P05787 483 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 VAV1P15498 845 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 ARL1P40616 181 aaPredicted RBP9.35□□□□□ -0.91
MACF1-224ENST00000496804 KCNJ1P48048 391 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 TRPC1P48995 793 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 COASYQ13057 564 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 RASA3Q14644 834 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 KIF22Q14807 665 aa9.35□□□□□ -0.91
MACF1-224ENST00000496804 PFKFB3Q16875 520 aaPredicted RBP9.35□□□□□ -0.91
MACF1-224ENST00000496804 PRPF39Q86UA1 669 aaKnown RBP9.35□□□□□ -0.91
MACF1-224ENST00000496804 TTC8Q8TAM2 541 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms