RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 MAEAQ7L5Y9 396 aa13.72□□□□□ -0.21
CLDN12-213ENST00000496677 VPS52Q8N1B4 723 aa13.72□□□□□ -0.21
CLDN12-213ENST00000496677 GSTCDQ8NEC7 633 aa13.72□□□□□ -0.21
CLDN12-213ENST00000496677 TMEM169Q96HH4 297 aa13.72□□□□□ -0.21
CLDN12-213ENST00000496677 TMEM175Q9BSA9 504 aa13.72□□□□□ -0.21
CLDN12-213ENST00000496677 LRFN3Q9BTN0 628 aa13.72□□□□□ -0.21
CLDN12-213ENST00000496677 MMTAG2Q9BU76 263 aaKnown RBP13.72□□□□□ -0.21
CLDN12-213ENST00000496677 UBN1Q9NPG3 1134 aa13.72□□□□□ -0.21
CLDN12-213ENST00000496677 KANSL3Q9P2N6 904 aa13.72□□□□□ -0.21
CLDN12-213ENST00000496677 LRWD1Q9UFC0 647 aa13.72□□□□□ -0.21
CLDN12-213ENST00000496677 SSUH2Q9Y2M2 353 aa13.72□□□□□ -0.21
CLDN12-213ENST00000496677 USP15Q9Y4E8 981 aaPredicted RBP13.72□□□□□ -0.21
CLDN12-213ENST00000496677 HES2Q9Y543 173 aa13.72□□□□□ -0.21
CLDN12-213ENST00000496677 ARHGEF35A5YM69 484 aa13.71□□□□□ -0.21
CLDN12-213ENST00000496677 ARL5CA6NH57 179 aa13.71□□□□□ -0.21
CLDN12-213ENST00000496677 LAD1O00515 517 aa13.71□□□□□ -0.21
CLDN12-213ENST00000496677 LILRB3O75022 631 aa13.71□□□□□ -0.21
CLDN12-213ENST00000496677 POMCP01189 267 aa13.71□□□□□ -0.21
CLDN12-213ENST00000496677 ALDH2P05091 517 aa13.71□□□□□ -0.21
CLDN12-213ENST00000496677 CTSAP10619 480 aa13.71□□□□□ -0.21
CLDN12-213ENST00000496677 GJB2P29033 226 aa13.71□□□□□ -0.21
CLDN12-213ENST00000496677 SSTR3P32745 418 aaPredicted RBP13.71□□□□□ -0.21
CLDN12-213ENST00000496677 CCT6AP40227 531 aaKnown RBP13.71□□□□□ -0.21
CLDN12-213ENST00000496677 MCM2P49736 904 aa13.71□□□□□ -0.21
CLDN12-213ENST00000496677 RNASELQ05823 741 aaKnown RBP13.71□□□□□ -0.21
CLDN12-213ENST00000496677 DSC1Q08554 894 aa13.71□□□□□ -0.21
CLDN12-213ENST00000496677 CBX2Q14781 532 aaPredicted RBP13.71□□□□□ -0.21
CLDN12-213ENST00000496677 COLGALT2Q8IYK4 626 aa13.71□□□□□ -0.21
CLDN12-213ENST00000496677 URGCPQ8TCY9 931 aa13.71□□□□□ -0.21
CLDN12-213ENST00000496677 PRIMPOLQ96LW4 560 aa13.71□□□□□ -0.21
CLDN12-213ENST00000496677 CCDC43Q96MW1 224 aaKnown RBP13.71□□□□□ -0.21
CLDN12-213ENST00000496677 GAD1Q99259 594 aa13.71□□□□□ -0.21
CLDN12-213ENST00000496677 CCDC113Q9H0I3 377 aa13.71□□□□□ -0.21
CLDN12-213ENST00000496677 KIF3AQ9Y496 699 aa13.71□□□□□ -0.21
CLDN12-213ENST00000496677 LRRIQ4A6NIV6 560 aa13.7□□□□□ -0.22
CLDN12-213ENST00000496677 PP2D1A8MPX8 630 aa13.7□□□□□ -0.22
CLDN12-213ENST00000496677 LOC730098B7Z3J9 87 aa13.7□□□□□ -0.22
CLDN12-213ENST00000496677 NRP1O14786 923 aa13.7□□□□□ -0.22
CLDN12-213ENST00000496677 EDN1P05305 212 aa13.7□□□□□ -0.22
CLDN12-213ENST00000496677 COL9A1P20849 921 aa13.7□□□□□ -0.22
CLDN12-213ENST00000496677 NCBP1Q09161 790 aaKnown RBP13.7□□□□□ -0.22
CLDN12-213ENST00000496677 HAUS3Q68CZ6 603 aa13.7□□□□□ -0.22
CLDN12-213ENST00000496677 SLC27A1Q6PCB7 646 aa13.7□□□□□ -0.22
CLDN12-213ENST00000496677 CDR2LQ86X02 465 aaPredicted RBP13.7□□□□□ -0.22
CLDN12-213ENST00000496677 RNF168Q8IYW5 571 aaPredicted RBP13.7□□□□□ -0.22
CLDN12-213ENST00000496677 SLC22A17Q8WUG5 538 aa13.7□□□□□ -0.22
CLDN12-213ENST00000496677 AUTS2Q8WXX7 1259 aa13.7□□□□□ -0.22
CLDN12-213ENST00000496677 ZFP42Q96MM3 310 aa13.7□□□□□ -0.22
CLDN12-213ENST00000496677 GBP3Q9H0R5 595 aa13.7□□□□□ -0.22
CLDN12-213ENST00000496677 BHMT2Q9H2M3 363 aa13.7□□□□□ -0.22
CLDN12-213ENST00000496677 NXF3Q9H4D5 531 aaKnown RBP13.7□□□□□ -0.22
CLDN12-213ENST00000496677 POLD4Q9HCU8 107 aa13.7□□□□□ -0.22
CLDN12-213ENST00000496677 PRMT7Q9NVM4 692 aaPredicted RBP13.7□□□□□ -0.22
CLDN12-213ENST00000496677 MARCH5Q9NX47 278 aa13.7□□□□□ -0.22
CLDN12-213ENST00000496677 KIAA1024Q9UPX6 916 aa13.7□□□□□ -0.22
CLDN12-213ENST00000496677 FAN1Q9Y2M0 1017 aa13.7□□□□□ -0.22
CLDN12-213ENST00000496677 GIT1Q9Y2X7 761 aa13.7□□□□□ -0.22
CLDN12-213ENST00000496677 HCFC2Q9Y5Z7 792 aa13.7□□□□□ -0.22
CLDN12-213ENST00000496677 STK24Q9Y6E0 443 aa13.7□□□□□ -0.22
CLDN12-213ENST00000496677 NPTXRO95502 500 aa13.69□□□□□ -0.22
CLDN12-213ENST00000496677 HOXB8P17481 243 aaPredicted RBP13.69□□□□□ -0.22
CLDN12-213ENST00000496677 CDC25AP30304 524 aa13.69□□□□□ -0.22
CLDN12-213ENST00000496677 NAMPTP43490 491 aa13.69□□□□□ -0.22
CLDN12-213ENST00000496677 ATP2C1P98194 919 aaPredicted RBP13.69□□□□□ -0.22
CLDN12-213ENST00000496677 RILPL1Q5EBL4 403 aa13.69□□□□□ -0.22
CLDN12-213ENST00000496677 HYIQ5T013 277 aa13.69□□□□□ -0.22
CLDN12-213ENST00000496677 LLGL2Q6P1M3 1020 aa13.69□□□□□ -0.22
CLDN12-213ENST00000496677 KCNK18Q7Z418 384 aa13.69□□□□□ -0.22
CLDN12-213ENST00000496677 DAW1Q8N136 415 aa13.69□□□□□ -0.22
CLDN12-213ENST00000496677 CASP10Q92851 521 aa13.69□□□□□ -0.22
CLDN12-213ENST00000496677 POP1Q99575 1024 aaKnown RBP13.69□□□□□ -0.22
CLDN12-213ENST00000496677 C2orf40Q9H1Z8 148 aa13.69□□□□□ -0.22
CLDN12-213ENST00000496677 PDZD7Q9H5P4 517 aa13.69□□□□□ -0.22
CLDN12-213ENST00000496677 UPF2Q9HAU5 1272 aaKnown RBP13.69□□□□□ -0.22
CLDN12-213ENST00000496677 DDX19AQ9NUU7 478 aaKnown RBP13.69□□□□□ -0.22
CLDN12-213ENST00000496677 RAPGEFL1Q9UHV5 662 aa13.69□□□□□ -0.22
CLDN12-213ENST00000496677 ZMYM2Q9UBW7 1377 aa13.69□□□□□ -0.22
CLDN12-213ENST00000496677 TRIOO75962 3097 aa13.68□□□□□ -0.22
CLDN12-213ENST00000496677 DCXO43602 365 aa13.68□□□□□ -0.22
CLDN12-213ENST00000496677 ALADP13716 330 aa13.68□□□□□ -0.22
CLDN12-213ENST00000496677 AKAP5P24588 427 aa13.68□□□□□ -0.22
CLDN12-213ENST00000496677 MLH1P40692 756 aa13.68□□□□□ -0.22
CLDN12-213ENST00000496677 SCNN1GP51170 649 aa13.68□□□□□ -0.22
CLDN12-213ENST00000496677 MAPK7Q13164 816 aa13.68□□□□□ -0.22
CLDN12-213ENST00000496677 CUL4AQ13619 759 aa13.68□□□□□ -0.22
CLDN12-213ENST00000496677 GIT2Q14161 759 aa13.68□□□□□ -0.22
CLDN12-213ENST00000496677 PTPN14Q15678 1187 aa13.68□□□□□ -0.22
CLDN12-213ENST00000496677 HERC4Q5GLZ8 1057 aaPredicted RBP13.68□□□□□ -0.22
CLDN12-213ENST00000496677 TMEM31Q5JXX7 168 aa13.68□□□□□ -0.22
CLDN12-213ENST00000496677 MCTP1Q6DN14 999 aa13.68□□□□□ -0.22
CLDN12-213ENST00000496677 DTHD1Q6ZMT9 781 aa13.68□□□□□ -0.22
CLDN12-213ENST00000496677 TAS1R1Q7RTX1 841 aa13.68□□□□□ -0.22
CLDN12-213ENST00000496677 RNF135Q8IUD6 432 aa13.68□□□□□ -0.22
CLDN12-213ENST00000496677 SNX29Q8TEQ0 813 aa13.68□□□□□ -0.22
CLDN12-213ENST00000496677 KIFAP3Q92845 792 aa13.68□□□□□ -0.22
CLDN12-213ENST00000496677 FAM193BQ96PV7 902 aaPredicted RBP13.68□□□□□ -0.22
CLDN12-213ENST00000496677 PHF7Q9BWX1 381 aaPredicted RBP13.68□□□□□ -0.22
CLDN12-213ENST00000496677 STK39Q9UEW8 545 aa13.68□□□□□ -0.22
CLDN12-213ENST00000496677 USP20Q9Y2K6 914 aa13.68□□□□□ -0.22
CLDN12-213ENST00000496677 FAM86C2PA6NEL3 165 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms