RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 ITGA4P13612 1032 aa17.78■□□□□ 0.44
DNMT3A-215ENST00000496570 PLS3P13797 630 aa17.78■□□□□ 0.44
DNMT3A-215ENST00000496570 PLCB3Q01970 1234 aa17.78■□□□□ 0.44
DNMT3A-215ENST00000496570 NCBP1Q09161 790 aaKnown RBP17.78■□□□□ 0.44
DNMT3A-215ENST00000496570 PRPF4BQ13523 1007 aaKnown RBP17.78■□□□□ 0.44
DNMT3A-215ENST00000496570 TIGD5Q53EQ6 642 aa17.78■□□□□ 0.44
DNMT3A-215ENST00000496570 TCEAL5Q5H9L2 206 aa17.78■□□□□ 0.44
DNMT3A-215ENST00000496570 GPBP1Q86WP2 473 aa17.78■□□□□ 0.44
DNMT3A-215ENST00000496570 TMEM173Q86WV6 379 aaPredicted RBP17.78■□□□□ 0.44
DNMT3A-215ENST00000496570 SLC39A11Q8N1S5 342 aa17.78■□□□□ 0.44
DNMT3A-215ENST00000496570 SPIRE2Q8WWL2 714 aa17.78■□□□□ 0.44
DNMT3A-215ENST00000496570 ZNF396Q96N95 335 aaPredicted RBP17.78■□□□□ 0.44
DNMT3A-215ENST00000496570 REEP2Q9BRK0 252 aa17.78■□□□□ 0.44
DNMT3A-215ENST00000496570 NSUN3Q9H649 340 aaKnown RBP17.78■□□□□ 0.44
DNMT3A-215ENST00000496570 TMEM134Q9H6X4 195 aa17.78■□□□□ 0.44
DNMT3A-215ENST00000496570 C17orf75Q9HAS0 396 aa17.78■□□□□ 0.44
DNMT3A-215ENST00000496570 AAASQ9NRG9 546 aa17.78■□□□□ 0.44
DNMT3A-215ENST00000496570 MIOSQ9NXC5 875 aa17.78■□□□□ 0.44
DNMT3A-215ENST00000496570 DNAJB4Q9UDY4 337 aa17.78■□□□□ 0.44
DNMT3A-215ENST00000496570 PCDHGC5Q9Y5F6 944 aa17.78■□□□□ 0.44
DNMT3A-215ENST00000496570 PHLPP2Q6ZVD8 1323 aa17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 MYH11P35749 1972 aa17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 CCDC169A6NNP5 214 aa17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 SPTLC2O15270 562 aa17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 SLC16A4O15374 487 aa17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 PPP6R2O75170 966 aa17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 YEATS4O95619 227 aa17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 LIG1P18858 919 aa17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 DDIT3P35638 169 aa17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 ZNF131P52739 623 aa17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 BCAR1P56945 870 aa17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 ERVFC1P60507 584 aa17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 TFF2Q03403 129 aa17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 DMP1Q13316 513 aaPredicted RBP17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 GIT2Q14161 759 aa17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 DHX8Q14562 1220 aaKnown RBP17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 STK38Q15208 465 aa17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 CSPP1Q1MSJ5 1256 aa17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 FOXD4L6Q3SYB3 417 aaPredicted RBP17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 FOXD4L3Q6VB84 417 aaPredicted RBP17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 THNSL1Q8IYQ7 743 aa17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 TMEM161BQ8NDZ6 487 aa17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 BCL7CQ8WUZ0 217 aaPredicted RBP17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 LARP4BQ92615 738 aaKnown RBP17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 ZFP42Q96MM3 310 aa17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 ZNF558Q96NG5 402 aa17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 CXCL16Q9H2A7 254 aa17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 PTPRHQ9HD43 1115 aa17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 KMT5AQ9NQR1 393 aa17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 THEGQ9P2T0 379 aa17.77■□□□□ 0.44
DNMT3A-215ENST00000496570 BRWD1Q9NSI6 2320 aa17.77■□□□□ 0.43
DNMT3A-215ENST00000496570 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.76■□□□□ 0.43
DNMT3A-215ENST00000496570 ARL5CA6NH57 179 aa17.76■□□□□ 0.43
DNMT3A-215ENST00000496570 NT5C1B-RDH14C9J2C7 533 aa17.76■□□□□ 0.43
DNMT3A-215ENST00000496570 K7ERI5 159 aa17.76■□□□□ 0.43
DNMT3A-215ENST00000496570 ABLIM1O14639 778 aa17.76■□□□□ 0.43
DNMT3A-215ENST00000496570 FSCN2O14926 492 aa17.76■□□□□ 0.43
DNMT3A-215ENST00000496570 N4BP3O15049 544 aa17.76■□□□□ 0.43
DNMT3A-215ENST00000496570 CSPG5O95196 566 aa17.76■□□□□ 0.43
DNMT3A-215ENST00000496570 AKAP5P24588 427 aa17.76■□□□□ 0.43
DNMT3A-215ENST00000496570 MLH1P40692 756 aa17.76■□□□□ 0.43
DNMT3A-215ENST00000496570 UBE3AQ05086 875 aa17.76■□□□□ 0.43
DNMT3A-215ENST00000496570 AXDND1Q5T1B0 1012 aaPredicted RBP17.76■□□□□ 0.43
DNMT3A-215ENST00000496570 ADGRD2Q7Z7M1 963 aa17.76■□□□□ 0.43
DNMT3A-215ENST00000496570 KCNN1Q92952 543 aa17.76■□□□□ 0.43
DNMT3A-215ENST00000496570 CHAMP1Q96JM3 812 aa17.76■□□□□ 0.43
DNMT3A-215ENST00000496570 FIZ1Q96SL8 496 aa17.76■□□□□ 0.43
DNMT3A-215ENST00000496570 GAD1Q99259 594 aa17.76■□□□□ 0.43
DNMT3A-215ENST00000496570 ACO2Q99798 780 aaKnown RBP17.76■□□□□ 0.43
DNMT3A-215ENST00000496570 UBN1Q9NPG3 1134 aa17.76■□□□□ 0.43
DNMT3A-215ENST00000496570 ODF2LQ9ULJ1 636 aa17.76■□□□□ 0.43
DNMT3A-215ENST00000496570 LZTS1Q9Y250 596 aa17.76■□□□□ 0.43
DNMT3A-215ENST00000496570 ZC3H11AO75152 810 aaKnown RBP eCLIP17.75■□□□□ 0.43
DNMT3A-215ENST00000496570 POMCP01189 267 aa17.75■□□□□ 0.43
DNMT3A-215ENST00000496570 GALTP07902 379 aa17.75■□□□□ 0.43
DNMT3A-215ENST00000496570 MAPTP10636 758 aaKnown RBP17.75■□□□□ 0.43
DNMT3A-215ENST00000496570 GTF2F1P35269 517 aaKnown RBP eCLIP17.75■□□□□ 0.43
DNMT3A-215ENST00000496570 SLC11A1P49279 550 aa17.75■□□□□ 0.43
DNMT3A-215ENST00000496570 NCKAP1LP55160 1127 aa17.75■□□□□ 0.43
DNMT3A-215ENST00000496570 DNM1Q05193 864 aaKnown RBP17.75■□□□□ 0.43
DNMT3A-215ENST00000496570 HYAL1Q12794 435 aa17.75■□□□□ 0.43
DNMT3A-215ENST00000496570 SKIV2LQ15477 1246 aaKnown RBP17.75■□□□□ 0.43
DNMT3A-215ENST00000496570 ATF7IP2Q5U623 682 aa17.75■□□□□ 0.43
DNMT3A-215ENST00000496570 SHC4Q6S5L8 630 aa17.75■□□□□ 0.43
DNMT3A-215ENST00000496570 RASSF8Q8NHQ8 419 aa17.75■□□□□ 0.43
DNMT3A-215ENST00000496570 ATXN2LQ8WWM7 1075 aaKnown RBP17.75■□□□□ 0.43
DNMT3A-215ENST00000496570 MRPS27Q92552 414 aaKnown RBP17.75■□□□□ 0.43
DNMT3A-215ENST00000496570 APOL6Q9BWW8 343 aa17.75■□□□□ 0.43
DNMT3A-215ENST00000496570 VN1R3Q9BXE9 311 aa17.75■□□□□ 0.43
DNMT3A-215ENST00000496570 TRIM6Q9C030 488 aaPredicted RBP17.75■□□□□ 0.43
DNMT3A-215ENST00000496570 SPG21Q9NZD8 308 aa17.75■□□□□ 0.43
DNMT3A-215ENST00000496570 STK17AQ9UEE5 414 aa17.75■□□□□ 0.43
DNMT3A-215ENST00000496570 TNFSF13BQ9Y275 285 aa17.75■□□□□ 0.43
DNMT3A-215ENST00000496570 GIT1Q9Y2X7 761 aa17.75■□□□□ 0.43
DNMT3A-215ENST00000496570 RBM19Q9Y4C8 960 aaKnown RBP17.75■□□□□ 0.43
DNMT3A-215ENST00000496570 ZMYM2Q9UBW7 1377 aa17.75■□□□□ 0.43
DNMT3A-215ENST00000496570 PROZP22891 400 aa17.74■□□□□ 0.43
DNMT3A-215ENST00000496570 PPM1AP35813 382 aa17.74■□□□□ 0.43
DNMT3A-215ENST00000496570 SCNN1GP51170 649 aa17.74■□□□□ 0.43
DNMT3A-215ENST00000496570 DSC1Q08554 894 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms