RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 AGO4Q9HCK5 861 aaKnown RBP13.21□□□□□ -0.29
ATG3-209ENST00000496423 UBN1Q9NPG3 1134 aa13.21□□□□□ -0.29
ATG3-209ENST00000496423 POLIQ9UNA4 740 aa13.21□□□□□ -0.29
ATG3-209ENST00000496423 CNTNAP2Q9UHC6 1331 aa13.2□□□□□ -0.3
ATG3-209ENST00000496423 DDX39AO00148 427 aaKnown RBP13.2□□□□□ -0.3
ATG3-209ENST00000496423 IFIT3O14879 490 aaKnown RBP13.2□□□□□ -0.3
ATG3-209ENST00000496423 DDHD2O94830 711 aa13.2□□□□□ -0.3
ATG3-209ENST00000496423 FGFR4P22455 802 aa13.2□□□□□ -0.3
ATG3-209ENST00000496423 DNM2P50570 870 aa13.2□□□□□ -0.3
ATG3-209ENST00000496423 ZNF252P-AS1Q0IIN9 211 aa13.2□□□□□ -0.3
ATG3-209ENST00000496423 SLC35G1Q2M3R5 365 aa13.2□□□□□ -0.3
ATG3-209ENST00000496423 CEP55Q53EZ4 464 aa13.2□□□□□ -0.3
ATG3-209ENST00000496423 SPEM1Q8N4L4 309 aa13.2□□□□□ -0.3
ATG3-209ENST00000496423 CTCFLQ8NI51 663 aaPredicted RBP13.2□□□□□ -0.3
ATG3-209ENST00000496423 FAM3CQ92520 227 aa13.2□□□□□ -0.3
ATG3-209ENST00000496423 COLEC11Q9BWP8 271 aa13.2□□□□□ -0.3
ATG3-209ENST00000496423 SPZ1Q9BXG8 430 aa13.2□□□□□ -0.3
ATG3-209ENST00000496423 RSAD1Q9HA92 442 aa13.2□□□□□ -0.3
ATG3-209ENST00000496423 KCNH3Q9ULD8 1083 aa13.2□□□□□ -0.3
ATG3-209ENST00000496423 PIN4Q9Y237 131 aaKnown RBP13.2□□□□□ -0.3
ATG3-209ENST00000496423 MAFBQ9Y5Q3 323 aaPredicted RBP13.2□□□□□ -0.3
ATG3-209ENST00000496423 ASPMQ8IZT6 3477 aa13.2□□□□□ -0.3
ATG3-209ENST00000496423 FRYQ5TBA9 3013 aa13.19□□□□□ -0.3
ATG3-209ENST00000496423 PSAPP07602 524 aa13.19□□□□□ -0.3
ATG3-209ENST00000496423 GNAQP50148 359 aa13.19□□□□□ -0.3
ATG3-209ENST00000496423 LRRC32Q14392 662 aa13.19□□□□□ -0.3
ATG3-209ENST00000496423 USP41Q3LFD5 358 aa13.19□□□□□ -0.3
ATG3-209ENST00000496423 LILRA6Q6PI73 481 aa13.19□□□□□ -0.3
ATG3-209ENST00000496423 TAS1R1Q7RTX1 841 aa13.19□□□□□ -0.3
ATG3-209ENST00000496423 LRRC71Q8N4P6 559 aa13.19□□□□□ -0.3
ATG3-209ENST00000496423 OTUD7AQ8TE49 926 aaPredicted RBP13.19□□□□□ -0.3
ATG3-209ENST00000496423 GATA6Q92908 595 aa13.19□□□□□ -0.3
ATG3-209ENST00000496423 IRF7Q92985 503 aa13.19□□□□□ -0.3
ATG3-209ENST00000496423 ZNF668Q96K58 619 aaPredicted RBP13.19□□□□□ -0.3
ATG3-209ENST00000496423 SCNM1Q9BWG6 230 aa13.19□□□□□ -0.3
ATG3-209ENST00000496423 BRD9Q9H8M2 597 aa13.19□□□□□ -0.3
ATG3-209ENST00000496423 LY9Q9HBG7 655 aa13.19□□□□□ -0.3
ATG3-209ENST00000496423 PRG3Q9Y2Y8 225 aaPredicted RBP13.19□□□□□ -0.3
ATG3-209ENST00000496423 PCDHGA5Q9Y5G8 931 aa13.19□□□□□ -0.3
ATG3-209ENST00000496423 CEP295Q9C0D2 2601 aa13.19□□□□□ -0.3
ATG3-209ENST00000496423 ZFYVE26Q68DK2 2539 aa13.18□□□□□ -0.3
ATG3-209ENST00000496423 RIOK3O14730 519 aaKnown RBP13.18□□□□□ -0.3
ATG3-209ENST00000496423 FOSP01100 380 aaPredicted RBP13.18□□□□□ -0.3
ATG3-209ENST00000496423 HOXA9P31269 272 aa13.18□□□□□ -0.3
ATG3-209ENST00000496423 RDXP35241 583 aaKnown RBP13.18□□□□□ -0.3
ATG3-209ENST00000496423 SATB1Q01826 763 aa13.18□□□□□ -0.3
ATG3-209ENST00000496423 TROAPQ12815 778 aa13.18□□□□□ -0.3
ATG3-209ENST00000496423 ITGB3BPQ13352 177 aaPredicted RBP13.18□□□□□ -0.3
ATG3-209ENST00000496423 UBE2SQ16763 222 aa13.18□□□□□ -0.3
ATG3-209ENST00000496423 C1orf228Q6PIY5 440 aa13.18□□□□□ -0.3
ATG3-209ENST00000496423 CACNA2D4Q7Z3S7 1137 aa13.18□□□□□ -0.3
ATG3-209ENST00000496423 GLYCTKQ8IVS8 523 aa13.18□□□□□ -0.3
ATG3-209ENST00000496423 TEX2Q8IWB9 1127 aa13.18□□□□□ -0.3
ATG3-209ENST00000496423 SMAP1Q8IYB5 467 aaPredicted RBP13.18□□□□□ -0.3
ATG3-209ENST00000496423 RILPL2Q969X0 211 aa13.18□□□□□ -0.3
ATG3-209ENST00000496423 MAP3K14Q99558 947 aa13.18□□□□□ -0.3
ATG3-209ENST00000496423 DSCC1Q9BVC3 393 aa13.18□□□□□ -0.3
ATG3-209ENST00000496423 VPS45Q9NRW7 570 aa13.18□□□□□ -0.3
ATG3-209ENST00000496423 TBC1D22BQ9NU19 505 aa13.18□□□□□ -0.3
ATG3-209ENST00000496423 GDE1Q9NZC3 331 aa13.18□□□□□ -0.3
ATG3-209ENST00000496423 COL4A3Q01955 1670 aa13.18□□□□□ -0.3
ATG3-209ENST00000496423 MEIS1O00470 390 aa13.17□□□□□ -0.3
ATG3-209ENST00000496423 EPN2O95208 641 aa13.17□□□□□ -0.3
ATG3-209ENST00000496423 PAPSS2O95340 614 aaPredicted RBP13.17□□□□□ -0.3
ATG3-209ENST00000496423 ZIC2O95409 532 aaPredicted RBP13.17□□□□□ -0.3
ATG3-209ENST00000496423 CCNE2O96020 404 aa13.17□□□□□ -0.3
ATG3-209ENST00000496423 POMCP01189 267 aa13.17□□□□□ -0.3
ATG3-209ENST00000496423 CEACAM1P13688 526 aa13.17□□□□□ -0.3
ATG3-209ENST00000496423 ATP4AP20648 1035 aa13.17□□□□□ -0.3
ATG3-209ENST00000496423 HEATR6Q6AI08 1181 aaKnown RBP13.17□□□□□ -0.3
ATG3-209ENST00000496423 ZNF746Q6NUN9 644 aaPredicted RBP13.17□□□□□ -0.3
ATG3-209ENST00000496423 NIPA1Q7RTP0 329 aa13.17□□□□□ -0.3
ATG3-209ENST00000496423 CATSPER4Q7RTX7 472 aa13.17□□□□□ -0.3
ATG3-209ENST00000496423 LINC01465Q8N7H1 131 aa13.17□□□□□ -0.3
ATG3-209ENST00000496423 CNNM3Q8NE01 707 aa13.17□□□□□ -0.3
ATG3-209ENST00000496423 ELSPBP1Q96BH3 223 aa13.17□□□□□ -0.3
ATG3-209ENST00000496423 TRMT61BQ9BVS5 477 aaKnown RBP13.17□□□□□ -0.3
ATG3-209ENST00000496423 TMEM121BQ9BXQ6 578 aaPredicted RBP13.17□□□□□ -0.3
ATG3-209ENST00000496423 CHST7Q9NS84 486 aa13.17□□□□□ -0.3
ATG3-209ENST00000496423 SAMM50Q9Y512 469 aa13.17□□□□□ -0.3
ATG3-209ENST00000496423 PCDHB2Q9Y5E7 798 aa13.17□□□□□ -0.3
ATG3-209ENST00000496423 PCDHA10Q9Y5I2 948 aa13.17□□□□□ -0.3
ATG3-209ENST00000496423 GCN1Q92616 2671 aaKnown RBP13.16□□□□□ -0.3
ATG3-209ENST00000496423 ZZEF1O43149 2961 aa13.16□□□□□ -0.3
ATG3-209ENST00000496423 CCER2I3L3R5 266 aa13.16□□□□□ -0.3
ATG3-209ENST00000496423 CSDE1O75534 798 aaKnown RBP13.16□□□□□ -0.3
ATG3-209ENST00000496423 SPINK2P20155 84 aa13.16□□□□□ -0.3
ATG3-209ENST00000496423 NTHL1P78549 312 aa13.16□□□□□ -0.3
ATG3-209ENST00000496423 SRSF5Q13243 272 aaKnown RBP13.16□□□□□ -0.3
ATG3-209ENST00000496423 UVSSAQ2YD98 709 aa13.16□□□□□ -0.3
ATG3-209ENST00000496423 PABPC1LQ4VXU2 614 aaKnown RBP13.16□□□□□ -0.3
ATG3-209ENST00000496423 SOWAHCQ53LP3 525 aaPredicted RBP13.16□□□□□ -0.3
ATG3-209ENST00000496423 RTL10Q7L3V2 364 aa13.16□□□□□ -0.3
ATG3-209ENST00000496423 ZNF410Q86VK4 478 aa13.16□□□□□ -0.3
ATG3-209ENST00000496423 WDR5BQ86VZ2 330 aa13.16□□□□□ -0.3
ATG3-209ENST00000496423 ITFG1Q8TB96 612 aa13.16□□□□□ -0.3
ATG3-209ENST00000496423 MBOAT7Q96N66 472 aa13.16□□□□□ -0.3
ATG3-209ENST00000496423 MRPS23Q9Y3D9 190 aaKnown RBP13.16□□□□□ -0.3
ATG3-209ENST00000496423 NEUROG3Q9Y4Z2 214 aa13.16□□□□□ -0.3
ATG3-209ENST00000496423 ADAMTS20P59510 1910 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms