RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 ZNF512BQ96KM6 892 aaPredicted RBP9.72□□□□□ -0.85
HPS4-217ENST00000496385 LRRC37BQ96QE4 947 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 ZNF184Q99676 751 aaPredicted RBP9.72□□□□□ -0.85
HPS4-217ENST00000496385 AP1M1Q9BXS5 423 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 ZC3H12CQ9C0D7 883 aaKnown RBP9.72□□□□□ -0.85
HPS4-217ENST00000496385 ASCC2Q9H1I8 757 aaPredicted RBP9.72□□□□□ -0.85
HPS4-217ENST00000496385 TBCCD1Q9NVR7 557 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 TUBGCP4Q9UGJ1 667 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 SBF1O95248 1867 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 G3V3G9 751 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 MAGEB2O15479 319 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 RAD17O75943 681 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 PDE8BO95263 885 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 ITGA2BP08514 1039 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 BCRP11274 1271 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 PIM1P11309 404 aaPredicted RBP9.72□□□□□ -0.85
HPS4-217ENST00000496385 ADORA1P30542 326 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 DNA2P51530 1060 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 AMPD3Q01432 767 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 LRRC63Q05C16 580 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 MGAT5Q09328 741 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 EARS2Q5JPH6 523 aaKnown RBP9.72□□□□□ -0.85
HPS4-217ENST00000496385 DCAF8Q5TAQ9 597 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 PPP1R21Q6ZMI0 780 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 C4orf50Q6ZRC1 276 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 MARK2Q7KZI7 788 aaKnown RBP9.72□□□□□ -0.85
HPS4-217ENST00000496385 ST13P4Q8IZP2 240 aaPredicted RBP9.72□□□□□ -0.85
HPS4-217ENST00000496385 VGLL2Q8N8G2 317 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 SUPT20HQ8NEM7 779 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 WDR60Q8WVS4 1066 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 C7orf25Q9BPX7 421 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 LRRC4CQ9HCJ2 640 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 DENND2AQ9ULE3 1009 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 BARX2Q9UMQ3 279 aaPredicted RBP9.72□□□□□ -0.85
HPS4-217ENST00000496385 PACSIN2Q9UNF0 486 aaPredicted RBP9.72□□□□□ -0.85
HPS4-217ENST00000496385 STXBP5LQ9Y2K9 1186 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 MROH5Q6ZUA9 1318 aa9.71□□□□□ -0.85
HPS4-217ENST00000496385 FAM205CA6NFA0 338 aa9.71□□□□□ -0.85
HPS4-217ENST00000496385 PODXLO00592 558 aa9.71□□□□□ -0.85
HPS4-217ENST00000496385 HSPA6P17066 643 aa9.71□□□□□ -0.85
HPS4-217ENST00000496385 RNASELQ05823 741 aaKnown RBP9.71□□□□□ -0.85
HPS4-217ENST00000496385 STRN3Q13033 797 aa9.71□□□□□ -0.85
HPS4-217ENST00000496385 PKN1Q16512 942 aa9.71□□□□□ -0.85
HPS4-217ENST00000496385 KIAA1755Q5JYT7 1200 aa9.71□□□□□ -0.85
HPS4-217ENST00000496385 PHLDB3Q6NSJ2 640 aa9.71□□□□□ -0.85
HPS4-217ENST00000496385 TRMT10CQ7L0Y3 403 aaKnown RBP9.71□□□□□ -0.85
HPS4-217ENST00000496385 ZNF654Q8IZM8 581 aa9.71□□□□□ -0.85
HPS4-217ENST00000496385 ANKLE1Q8NAG6 615 aa9.71□□□□□ -0.85
HPS4-217ENST00000496385 TGS1Q96RS0 853 aaKnown RBP9.71□□□□□ -0.85
HPS4-217ENST00000496385 ANKRD2Q9GZV1 360 aa9.71□□□□□ -0.85
HPS4-217ENST00000496385 UBA5Q9GZZ9 404 aa9.71□□□□□ -0.85
HPS4-217ENST00000496385 MYLK2Q9H1R3 596 aa9.71□□□□□ -0.85
HPS4-217ENST00000496385 DHX36Q9H2U1 1008 aaKnown RBP9.71□□□□□ -0.85
HPS4-217ENST00000496385 ACTL7BQ9Y614 415 aa9.71□□□□□ -0.85
HPS4-217ENST00000496385 A0A1B0GUL6 1792 aa9.71□□□□□ -0.86
HPS4-217ENST00000496385 LTBP1Q14766 1721 aa9.71□□□□□ -0.86
HPS4-217ENST00000496385 TMEM120BA0PK00 339 aa9.71□□□□□ -0.86
HPS4-217ENST00000496385 GNA14O95837 355 aa9.71□□□□□ -0.86
HPS4-217ENST00000496385 RGS2P41220 211 aa9.71□□□□□ -0.86
HPS4-217ENST00000496385 SERPINB8P50452 374 aa9.71□□□□□ -0.86
HPS4-217ENST00000496385 DR1Q01658 176 aa9.71□□□□□ -0.86
HPS4-217ENST00000496385 IL17AQ16552 155 aa9.71□□□□□ -0.86
HPS4-217ENST00000496385 CHADLQ6NUI6 762 aa9.71□□□□□ -0.86
HPS4-217ENST00000496385 PPP4R3CPQ6ZMV5 832 aa9.71□□□□□ -0.86
HPS4-217ENST00000496385 MFSD6Q6ZSS7 791 aa9.71□□□□□ -0.86
HPS4-217ENST00000496385 SRBD1Q8N5C6 995 aaKnown RBP9.71□□□□□ -0.86
HPS4-217ENST00000496385 PIP4K2CQ8TBX8 421 aa9.71□□□□□ -0.86
HPS4-217ENST00000496385 MXD3Q9BW11 206 aa9.71□□□□□ -0.86
HPS4-217ENST00000496385 SYNCQ9H7C4 482 aa9.71□□□□□ -0.86
HPS4-217ENST00000496385 PTTG2Q9NZH5 202 aa9.71□□□□□ -0.86
HPS4-217ENST00000496385 SPATA7Q9P0W8 599 aa9.71□□□□□ -0.86
HPS4-217ENST00000496385 DNAJB4Q9UDY4 337 aa9.71□□□□□ -0.86
HPS4-217ENST00000496385 MYH4Q9Y623 1939 aa9.71□□□□□ -0.86
HPS4-217ENST00000496385 RPTORQ8N122 1335 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 A8MXQ7 604 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 LAD1O00515 517 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 ZNF189O75820 626 aaPredicted RBP9.7□□□□□ -0.86
HPS4-217ENST00000496385 ZWINTO95229 277 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 ATP2B4P23634 1241 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 BCAMP50895 628 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 PDE4DQ08499 809 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 KCNMA1Q12791 1236 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 FAM83BQ5T0W9 1011 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 PEX26Q7Z412 305 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 C4orf32Q8N8J7 132 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 NKX2-3Q8TAU0 364 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 NAT14Q8WUY8 206 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 JDP2Q8WYK2 163 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 ARHGEF2Q92974 986 aaKnown RBP9.7□□□□□ -0.86
HPS4-217ENST00000496385 HAUS1Q96CS2 278 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 PITPNM3Q9BZ71 974 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 GJA3Q9Y6H8 435 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 UMODL1Q5DID0 1318 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 ZNF541Q9H0D2 1346 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 YDJCA8MPS7 323 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 RIPK2O43353 540 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 TLR2O60603 784 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 TCEA3O75764 348 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 CALM1P0DP23 149 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 CALM2P0DP24 149 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms