RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 SLC7A3Q8WY07 619 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 RUBCNQ92622 972 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 TAF4BQ92750 862 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 SLC35C1Q96A29 364 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 MMP19Q99542 508 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 CCDC94Q9BW85 323 aaPredicted RBP7.52□□□□□ -1.21
USP39-219ENST00000496047 MROH8Q9H579 483 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 ARHGAP20Q9P2F6 1191 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 WRAP73Q9P2S5 460 aaPredicted RBP7.52□□□□□ -1.21
USP39-219ENST00000496047 INTUQ9ULD6 942 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 RIPK3Q9Y572 518 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 DENND3A2RUS2 1198 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 ASB14A6NK59 587 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 RASSF10A6NK89 507 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 RNF225M0QZC1 329 aaPredicted RBP7.51□□□□□ -1.21
USP39-219ENST00000496047 DLL1O00548 723 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 NOP56O00567 594 aaKnown RBP7.51□□□□□ -1.21
USP39-219ENST00000496047 HNRNPDLO14979 420 aaKnown RBP7.51□□□□□ -1.21
USP39-219ENST00000496047 SLC16A4O15374 487 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 ATP8B1O43520 1251 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 GARTP22102 1010 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 SOX5P35711 763 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 PRKCIP41743 596 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 MATR3P43243 847 aaKnown RBP eCLIP7.51□□□□□ -1.21
USP39-219ENST00000496047 NAMPTP43490 491 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 CASP4P49662 377 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 LIG4P49917 911 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 ARID5AQ03989 594 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 EMC2Q15006 297 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 BRD3Q15059 726 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 ERCC6LQ2NKX8 1250 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 MTERF2Q49AM1 385 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 EAPPQ56P03 285 aaPredicted RBP7.51□□□□□ -1.21
USP39-219ENST00000496047 TREML2Q5T2D2 321 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 UTP14CQ5TAP6 766 aaKnown RBP7.51□□□□□ -1.21
USP39-219ENST00000496047 WDR78Q5VTH9 848 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 PLA2G4FQ68DD2 849 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 SLFN12LQ6IEE8 588 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 SWSAP1Q6NVH7 229 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 SEPT14Q6ZU15 432 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 TRAPPC11Q7Z392 1133 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 SYCE1Q8N0S2 351 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 SHCBP1Q8NEM2 672 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 UBE2Q2Q8WVN8 375 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 POMGNT1Q8WZA1 660 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 OPTNQ96CV9 577 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 WNK4Q96J92 1243 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 PURBQ96QR8 312 aaKnown RBP7.51□□□□□ -1.21
USP39-219ENST00000496047 FIZ1Q96SL8 496 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 STK33Q9BYT3 514 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 INTS2Q9H0H0 1204 aaKnown RBP7.51□□□□□ -1.21
USP39-219ENST00000496047 POLR3FQ9H1D9 316 aaPredicted RBP7.51□□□□□ -1.21
USP39-219ENST00000496047 ASCC2Q9H1I8 757 aaPredicted RBP7.51□□□□□ -1.21
USP39-219ENST00000496047 MLXIPQ9HAP2 919 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 CYP26B1Q9NR63 512 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 DMAC2Q9NW81 257 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 HSPBP1Q9NZL4 362 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 RNF14Q9UBS8 474 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 APEX2Q9UBZ4 518 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.51□□□□□ -1.21
USP39-219ENST00000496047 TBX20Q9UMR3 447 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 KCNH4Q9UQ05 1017 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 FHOD1Q9Y613 1164 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 IVNS1ABPQ9Y6Y0 642 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 V9GYY5 206 aaPredicted RBP7.51□□□□□ -1.21
USP39-219ENST00000496047 TRIP11Q15643 1979 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 EMSYQ7Z589 1322 aa7.51□□□□□ -1.21
USP39-219ENST00000496047 A0A0U1RQG5 324 aaPredicted RBP7.5□□□□□ -1.21
USP39-219ENST00000496047 CCDC151A5D8V7 595 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 GLTPD2A6NH11 291 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 BTNL10A8MVZ5 291 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 ZBTB39O15060 712 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 EPHB6O15197 1021 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 PMM2O15305 246 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 ATP9AO75110 1047 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 CCNE2O96020 404 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 CFHP08603 1231 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 PRLRP16471 622 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 SLC9A1P19634 815 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 GTF2H1P32780 548 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 HOXD13P35453 343 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 SLC26A2P50443 739 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 LBX1P52954 281 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 MFAP3P55082 362 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 FKBP1BP68106 108 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 CYP27A1Q02318 531 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 GFPT1Q06210 699 aaPredicted RBP7.5□□□□□ -1.21
USP39-219ENST00000496047 CLUL1Q15846 466 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 UGCGQ16739 394 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 BRDTQ58F21 947 aaPredicted RBP7.5□□□□□ -1.21
USP39-219ENST00000496047 PAPD7Q5XG87 772 aaKnown RBP7.5□□□□□ -1.21
USP39-219ENST00000496047 METTL7BQ6UX53 244 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 ABHD15Q6UXT9 468 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 CYFIP1Q7L576 1253 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 ENOSF1Q7L5Y1 443 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 CCDC60Q8IWA6 550 aaPredicted RBP7.5□□□□□ -1.21
USP39-219ENST00000496047 ZBTB8OSQ8IWT0 167 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 DAW1Q8N136 415 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 GPD1LQ8N335 351 aa7.5□□□□□ -1.21
USP39-219ENST00000496047 CTNNBL1Q8WYA6 563 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms