RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 GPM6BQ13491 265 aa10.81□□□□□ -0.68
CALD1-223ENST00000496024 E2F4Q16254 413 aa10.81□□□□□ -0.68
CALD1-223ENST00000496024 FAM187BQ17R55 369 aa10.81□□□□□ -0.68
CALD1-223ENST00000496024 ATF7IP2Q5U623 682 aa10.81□□□□□ -0.68
CALD1-223ENST00000496024 SLC27A1Q6PCB7 646 aa10.81□□□□□ -0.68
CALD1-223ENST00000496024 GLB1LQ6UWU2 654 aa10.81□□□□□ -0.68
CALD1-223ENST00000496024 AGMOQ6ZNB7 445 aa10.81□□□□□ -0.68
CALD1-223ENST00000496024 LRRC55Q6ZSA7 311 aa10.81□□□□□ -0.68
CALD1-223ENST00000496024 TAS1R3Q7RTX0 852 aa10.81□□□□□ -0.68
CALD1-223ENST00000496024 MRPL10Q7Z7H8 261 aaKnown RBP10.81□□□□□ -0.68
CALD1-223ENST00000496024 IQUBQ8NA54 791 aa10.81□□□□□ -0.68
CALD1-223ENST00000496024 TMEM161BQ8NDZ6 487 aa10.81□□□□□ -0.68
CALD1-223ENST00000496024 SPIRE2Q8WWL2 714 aa10.81□□□□□ -0.68
CALD1-223ENST00000496024 CCDC51Q96ER9 411 aa10.81□□□□□ -0.68
CALD1-223ENST00000496024 TRAIPQ9BWF2 469 aa10.81□□□□□ -0.68
CALD1-223ENST00000496024 SCAND2PQ9GZW5 306 aaPredicted RBP10.81□□□□□ -0.68
CALD1-223ENST00000496024 RNF39Q9H2S5 420 aa10.81□□□□□ -0.68
CALD1-223ENST00000496024 NXF3Q9H4D5 531 aaKnown RBP10.81□□□□□ -0.68
CALD1-223ENST00000496024 PDZD7Q9H5P4 517 aa10.81□□□□□ -0.68
CALD1-223ENST00000496024 TMEM134Q9H6X4 195 aa10.81□□□□□ -0.68
CALD1-223ENST00000496024 TBC1D7Q9P0N9 293 aa10.81□□□□□ -0.68
CALD1-223ENST00000496024 ARHGAP28Q9P2N2 729 aa10.81□□□□□ -0.68
CALD1-223ENST00000496024 KCNH3Q9ULD8 1083 aa10.81□□□□□ -0.68
CALD1-223ENST00000496024 RBM19Q9Y4C8 960 aaKnown RBP10.81□□□□□ -0.68
CALD1-223ENST00000496024 PHLPP2Q6ZVD8 1323 aa10.81□□□□□ -0.68
CALD1-223ENST00000496024 RALGAPA2Q2PPJ7 1873 aa10.81□□□□□ -0.68
CALD1-223ENST00000496024 COL4A4P53420 1690 aaPredicted RBP10.8□□□□□ -0.68
CALD1-223ENST00000496024 GTPBP6O43824 516 aaPredicted RBP10.8□□□□□ -0.68
CALD1-223ENST00000496024 TRAK2O60296 914 aa10.8□□□□□ -0.68
CALD1-223ENST00000496024 ZNF623O75123 536 aa10.8□□□□□ -0.68
CALD1-223ENST00000496024 OFD1O75665 1012 aa10.8□□□□□ -0.68
CALD1-223ENST00000496024 AKAP5P24588 427 aa10.8□□□□□ -0.68
CALD1-223ENST00000496024 NMT1P30419 496 aaKnown RBP10.8□□□□□ -0.68
CALD1-223ENST00000496024 PBX3P40426 434 aa10.8□□□□□ -0.68
CALD1-223ENST00000496024 AFMP43652 599 aa10.8□□□□□ -0.68
CALD1-223ENST00000496024 AFF1P51825 1210 aaKnown RBP10.8□□□□□ -0.68
CALD1-223ENST00000496024 STRN3Q13033 797 aa10.8□□□□□ -0.68
CALD1-223ENST00000496024 CCDC85BQ15834 202 aaPredicted RBP10.8□□□□□ -0.68
CALD1-223ENST00000496024 NOMO2Q5JPE7 1267 aa10.8□□□□□ -0.68
CALD1-223ENST00000496024 ADALQ6DHV7 355 aa10.8□□□□□ -0.68
CALD1-223ENST00000496024 HAUS6Q7Z4H7 955 aa10.8□□□□□ -0.68
CALD1-223ENST00000496024 ZBTB33Q86T24 672 aa10.8□□□□□ -0.68
CALD1-223ENST00000496024 SFR1Q86XK3 245 aa10.8□□□□□ -0.68
CALD1-223ENST00000496024 FAM178BQ8IXR5 827 aa10.8□□□□□ -0.68
CALD1-223ENST00000496024 CNNM3Q8NE01 707 aa10.8□□□□□ -0.68
CALD1-223ENST00000496024 CLP1Q92989 425 aaKnown RBP10.8□□□□□ -0.68
CALD1-223ENST00000496024 DNAJC19Q96DA6 116 aa10.8□□□□□ -0.68
CALD1-223ENST00000496024 BICD1Q96G01 975 aa10.8□□□□□ -0.68
CALD1-223ENST00000496024 SAMD11Q96NU1 681 aa10.8□□□□□ -0.68
CALD1-223ENST00000496024 ACO2Q99798 780 aaKnown RBP10.8□□□□□ -0.68
CALD1-223ENST00000496024 ADPGKQ9BRR6 497 aa10.8□□□□□ -0.68
CALD1-223ENST00000496024 NTPCRQ9BSD7 190 aaKnown RBP10.8□□□□□ -0.68
CALD1-223ENST00000496024 TCHPQ9BT92 498 aa10.8□□□□□ -0.68
CALD1-223ENST00000496024 TARS2Q9BW92 718 aaKnown RBP10.8□□□□□ -0.68
CALD1-223ENST00000496024 MRPL4Q9BYD3 311 aaKnown RBP10.8□□□□□ -0.68
CALD1-223ENST00000496024 GBP3Q9H0R5 595 aa10.8□□□□□ -0.68
CALD1-223ENST00000496024 CWH43Q9H720 699 aa10.8□□□□□ -0.68
CALD1-223ENST00000496024 RSAD1Q9HA92 442 aa10.8□□□□□ -0.68
CALD1-223ENST00000496024 KLK14Q9P0G3 267 aa10.8□□□□□ -0.68
CALD1-223ENST00000496024 PARP2Q9UGN5 583 aa10.8□□□□□ -0.68
CALD1-223ENST00000496024 SERTAD1Q9UHV2 236 aa10.8□□□□□ -0.68
CALD1-223ENST00000496024 KCNG1Q9UIX4 513 aa10.8□□□□□ -0.68
CALD1-223ENST00000496024 TRIP11Q15643 1979 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 GRM6O15303 877 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 LPXNO60711 386 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 POMCP01189 267 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 LINC00271P0C7V0 271 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 MAPTP10636 758 aaKnown RBP10.79□□□□□ -0.68
CALD1-223ENST00000496024 PFKFB1P16118 471 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 CMA1P23946 247 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 CASP1P29466 404 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 MLH1P40692 756 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 MATR3P43243 847 aaKnown RBP eCLIP10.79□□□□□ -0.68
CALD1-223ENST00000496024 ZNF131P52739 623 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 NCKAP1LP55160 1127 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 ZNF568Q3ZCX4 644 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 ZC2HC1CQ53FD0 456 aaPredicted RBP10.79□□□□□ -0.68
CALD1-223ENST00000496024 HERC4Q5GLZ8 1057 aaPredicted RBP10.79□□□□□ -0.68
CALD1-223ENST00000496024 GRAMD1CQ8IYS0 662 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 HACE1Q8IYU2 909 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 CEP57L1Q8IYX8 460 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 LRRC43Q8N309 656 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 FSIP1Q8NA03 581 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 KLHL23Q8NBE8 558 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 COLGALT1Q8NBJ5 622 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 URGCPQ8TCY9 931 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 ZBTB45Q96K62 511 aaPredicted RBP10.79□□□□□ -0.68
CALD1-223ENST00000496024 GAD1Q99259 594 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 BLZF1Q9H2G9 400 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 ALG13Q9NP73 1137 aaKnown RBP10.79□□□□□ -0.68
CALD1-223ENST00000496024 AAASQ9NRG9 546 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 PANK4Q9NVE7 773 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 SNTG2Q9NY99 539 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 ANKFY1Q9P2R3 1169 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 CIZ1Q9ULV3 898 aaPredicted RBP10.79□□□□□ -0.68
CALD1-223ENST00000496024 STXBP5LQ9Y2K9 1186 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 GDAQ9Y2T3 454 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 RWDD3Q9Y3V2 267 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 PCDHB12Q9Y5F1 795 aa10.79□□□□□ -0.68
CALD1-223ENST00000496024 TDRD15B5MCY1 1934 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms