RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 COG5Q9UP83 839 aa16.57■□□□□ 0.24
CALD1-222ENST00000495522 DENND3A2RUS2 1198 aa16.56■□□□□ 0.24
CALD1-222ENST00000495522 ZNF233A6NK53 670 aa16.56■□□□□ 0.24
CALD1-222ENST00000495522 NFKBIEO00221 500 aa16.56■□□□□ 0.24
CALD1-222ENST00000495522 DKC1O60832 514 aaKnown RBP eCLIP16.56■□□□□ 0.24
CALD1-222ENST00000495522 USP8P40818 1118 aa16.56■□□□□ 0.24
CALD1-222ENST00000495522 GMPSP49915 693 aaPredicted RBP16.56■□□□□ 0.24
CALD1-222ENST00000495522 CLUL1Q15846 466 aa16.56■□□□□ 0.24
CALD1-222ENST00000495522 ILDR2Q71H61 639 aa16.56■□□□□ 0.24
CALD1-222ENST00000495522 FAM71AQ8IYT1 594 aa16.56■□□□□ 0.24
CALD1-222ENST00000495522 SPIRE2Q8WWL2 714 aa16.56■□□□□ 0.24
CALD1-222ENST00000495522 C17orf75Q9HAS0 396 aa16.56■□□□□ 0.24
CALD1-222ENST00000495522 AMACRQ9UHK6 382 aa16.56■□□□□ 0.24
CALD1-222ENST00000495522 RTN2O75298 545 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 KRT14P02533 472 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 CNGA1P29973 690 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 OAZ1P54368 228 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 MFAP3P55082 362 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 GPC5P78333 572 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 MAP2K1Q02750 393 aaPredicted RBP16.55■□□□□ 0.24
CALD1-222ENST00000495522 DCAF12L1Q5VU92 463 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 KRT39Q6A163 491 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 SNRNP48Q6IEG0 339 aaKnown RBP16.55■□□□□ 0.24
CALD1-222ENST00000495522 C11orf63Q6NUN7 778 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 ZNF280CQ8ND82 737 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 REPS2Q8NFH8 660 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 KAT5Q92993 513 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 ATP6V0A1Q93050 837 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 LRRC45Q96CN5 670 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 CEP170P1Q96L14 293 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 RNPC3Q96LT9 517 aaKnown RBP16.55■□□□□ 0.24
CALD1-222ENST00000495522 KIFC3Q9BVG8 833 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 CAPS2Q9BXY5 557 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 PICK1Q9NRD5 415 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 CTTNBP2NLQ9P2B4 639 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 GABBR1Q9UBS5 961 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 SGPL1O95470 568 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 PPP2R5EQ16537 467 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 PPM1KQ8N3J5 372 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 EPS8L1Q8TE68 723 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 NSUN6Q8TEA1 469 aaKnown RBP16.55■□□□□ 0.24
CALD1-222ENST00000495522 PARD3BQ8TEW8 1205 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 SAAL1Q96ER3 474 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 NTPCRQ9BSD7 190 aaKnown RBP16.55■□□□□ 0.24
CALD1-222ENST00000495522 TMEM8AQ9HCN3 771 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 ZNF112Q9UJU3 913 aa16.55■□□□□ 0.24
CALD1-222ENST00000495522 NOCTQ9UK39 431 aaKnown RBP16.55■□□□□ 0.24
CALD1-222ENST00000495522 MIF4GDA9UHW6 222 aaKnown RBP16.54■□□□□ 0.24
CALD1-222ENST00000495522 PPFIA4O75335 1185 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 GZMAP12544 262 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 PTPRAP18433 802 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 SKOR1P84550 965 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 PRPF4BQ13523 1007 aaKnown RBP16.54■□□□□ 0.24
CALD1-222ENST00000495522 USP37Q86T82 979 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 NOP9Q86U38 636 aaKnown RBP16.54■□□□□ 0.24
CALD1-222ENST00000495522 DDX42Q86XP3 938 aaKnown RBP eCLIP16.54■□□□□ 0.24
CALD1-222ENST00000495522 C1orf131Q8NDD1 294 aaKnown RBP16.54■□□□□ 0.24
CALD1-222ENST00000495522 TMC2Q8TDI7 906 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 BSNDQ8WZ55 320 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 SHC3Q92529 594 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 CCDC127Q96BQ5 260 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 KREMEN1Q96MU8 473 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 CNOT7Q9UIV1 285 aaKnown RBP16.54■□□□□ 0.24
CALD1-222ENST00000495522 COQ4Q9Y3A0 265 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 ALG6Q9Y672 507 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 GOLGA6L10A0A0M3HER8 536 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 FAM170AA1A519 330 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 A6NNZ2 444 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 TTI1O43156 1089 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 ZNF862O60290 1169 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 PSAPP07602 524 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 KCNA2P16389 499 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 CHRNB2P17787 502 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 DSG3P32926 999 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 IRAK1P51617 712 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 PTENP60484 403 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 TUBB8Q3ZCM7 444 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 LRIG3Q6UXM1 1119 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 SEC14L1Q92503 715 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 SEMA4DQ92854 862 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 C12orf42Q96LP6 360 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 MFSD14AQ96MC6 490 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 FBXL18Q96ME1 805 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 PLAAQ9Y263 795 aa16.54■□□□□ 0.24
CALD1-222ENST00000495522 UTP11Q9Y3A2 253 aaKnown RBP16.54■□□□□ 0.24
CALD1-222ENST00000495522 COL11A1P12107 1806 aaPredicted RBP16.53■□□□□ 0.24
CALD1-222ENST00000495522 PHIPQ8WWQ0 1821 aa16.53■□□□□ 0.24
CALD1-222ENST00000495522 GTF2H1P32780 548 aa16.53■□□□□ 0.24
CALD1-222ENST00000495522 GPC3P51654 580 aa16.53■□□□□ 0.24
CALD1-222ENST00000495522 POU5F1Q01860 360 aaKnown RBP16.53■□□□□ 0.24
CALD1-222ENST00000495522 FOXR1Q6PIV2 292 aa16.53■□□□□ 0.24
CALD1-222ENST00000495522 UBL4BQ8N7F7 174 aa16.53■□□□□ 0.24
CALD1-222ENST00000495522 PROCA1Q8NCQ7 364 aaPredicted RBP16.53■□□□□ 0.24
CALD1-222ENST00000495522 MCPH1Q8NEM0 835 aa16.53■□□□□ 0.24
CALD1-222ENST00000495522 ZKSCAN4Q969J2 545 aaPredicted RBP16.53■□□□□ 0.24
CALD1-222ENST00000495522 CDHR1Q96JP9 859 aa16.53■□□□□ 0.24
CALD1-222ENST00000495522 WRNIP1Q96S55 665 aa16.53■□□□□ 0.24
CALD1-222ENST00000495522 PCDHB18PQ96TA0 734 aa16.53■□□□□ 0.24
CALD1-222ENST00000495522 SGIP1Q9BQI5 828 aa16.53■□□□□ 0.24
CALD1-222ENST00000495522 FAM114A2Q9NRY5 505 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms