RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 KANK3Q6NY19 840 aa25.86■■□□□ 1.73
COL27A1-208ENST00000494780 PLCD3Q8N3E9 789 aa25.86■■□□□ 1.73
COL27A1-208ENST00000494780 EIF2AQ9BY44 585 aaKnown RBP25.86■■□□□ 1.73
COL27A1-208ENST00000494780 TTC12Q9H892 705 aaPredicted RBP25.86■■□□□ 1.73
COL27A1-208ENST00000494780 SFXN1Q9H9B4 322 aa25.86■■□□□ 1.73
COL27A1-208ENST00000494780 MRPL17Q9NRX2 175 aaKnown RBP25.86■■□□□ 1.73
COL27A1-208ENST00000494780 INO80B-WBP1J3KQ70 363 aa25.85■■□□□ 1.73
COL27A1-208ENST00000494780 SSBP05455 408 aaKnown RBP eCLIP25.85■■□□□ 1.73
COL27A1-208ENST00000494780 CNPP09543 421 aaKnown RBP25.85■■□□□ 1.73
COL27A1-208ENST00000494780 CLCN4P51793 760 aa25.85■■□□□ 1.73
COL27A1-208ENST00000494780 VCPP55072 806 aaKnown RBP25.85■■□□□ 1.73
COL27A1-208ENST00000494780 TCF15Q12870 199 aa25.85■■□□□ 1.73
COL27A1-208ENST00000494780 NSUN7Q8NE18 718 aaKnown RBP25.85■■□□□ 1.73
COL27A1-208ENST00000494780 CSRNP2Q9H175 543 aa25.85■■□□□ 1.73
COL27A1-208ENST00000494780 BTBD18B2RXH4 712 aa25.84■■□□□ 1.73
COL27A1-208ENST00000494780 LARGE1O95461 756 aa25.84■■□□□ 1.73
COL27A1-208ENST00000494780 BRD1O95696 1058 aa25.84■■□□□ 1.73
COL27A1-208ENST00000494780 SOD2P04179 222 aa25.84■■□□□ 1.73
COL27A1-208ENST00000494780 ARL2P36404 184 aa25.84■■□□□ 1.73
COL27A1-208ENST00000494780 TMC5Q6UXY8 1006 aa25.84■■□□□ 1.73
COL27A1-208ENST00000494780 GPR149Q86SP6 731 aa25.84■■□□□ 1.73
COL27A1-208ENST00000494780 DIS3L2Q8IYB7 885 aaKnown RBP25.84■■□□□ 1.73
COL27A1-208ENST00000494780 COLGALT2Q8IYK4 626 aa25.84■■□□□ 1.73
COL27A1-208ENST00000494780 ASAP3Q8TDY4 903 aa25.84■■□□□ 1.73
COL27A1-208ENST00000494780 CPB2Q96IY4 423 aa25.84■■□□□ 1.73
COL27A1-208ENST00000494780 CCDC43Q96MW1 224 aaKnown RBP25.84■■□□□ 1.73
COL27A1-208ENST00000494780 NFKBIZQ9BYH8 718 aa25.84■■□□□ 1.73
COL27A1-208ENST00000494780 SSX2IPQ9Y2D8 614 aa25.84■■□□□ 1.73
COL27A1-208ENST00000494780 ARL5CA6NH57 179 aa25.83■■□□□ 1.73
COL27A1-208ENST00000494780 SPDYE4A6NLX3 237 aa25.83■■□□□ 1.73
COL27A1-208ENST00000494780 NEMFO60524 1076 aa25.83■■□□□ 1.73
COL27A1-208ENST00000494780 URODP06132 367 aa25.83■■□□□ 1.73
COL27A1-208ENST00000494780 TXKP42681 527 aa25.83■■□□□ 1.73
COL27A1-208ENST00000494780 NUBP1P53384 320 aa25.83■■□□□ 1.73
COL27A1-208ENST00000494780 MBTD1Q05BQ5 628 aa25.83■■□□□ 1.73
COL27A1-208ENST00000494780 CAPSQ13938 189 aa25.83■■□□□ 1.73
COL27A1-208ENST00000494780 TRIM29Q14134 588 aa25.83■■□□□ 1.73
COL27A1-208ENST00000494780 AMHR2Q16671 573 aa25.83■■□□□ 1.73
COL27A1-208ENST00000494780 GAD1Q99259 594 aa25.83■■□□□ 1.73
COL27A1-208ENST00000494780 HERC2P3Q9BVR0 1158 aa25.83■■□□□ 1.73
COL27A1-208ENST00000494780 RNF39Q9H2S5 420 aa25.83■■□□□ 1.73
COL27A1-208ENST00000494780 MARCH5Q9NX47 278 aa25.83■■□□□ 1.73
COL27A1-208ENST00000494780 PRG3Q9Y2Y8 225 aaPredicted RBP25.83■■□□□ 1.73
COL27A1-208ENST00000494780 PDGFBP01127 241 aaPredicted RBP25.82■■□□□ 1.72
COL27A1-208ENST00000494780 XRCC6P12956 609 aaKnown RBP eCLIP25.82■■□□□ 1.72
COL27A1-208ENST00000494780 MLH1P40692 756 aa25.82■■□□□ 1.72
COL27A1-208ENST00000494780 OR1G1P47890 313 aa25.82■■□□□ 1.72
COL27A1-208ENST00000494780 RARRES1P49788 294 aa25.82■■□□□ 1.72
COL27A1-208ENST00000494780 DSC1Q08554 894 aa25.82■■□□□ 1.72
COL27A1-208ENST00000494780 HACE1Q8IYU2 909 aa25.82■■□□□ 1.72
COL27A1-208ENST00000494780 MTMR9Q96QG7 549 aa25.82■■□□□ 1.72
COL27A1-208ENST00000494780 LIMD1Q9UGP4 676 aa25.82■■□□□ 1.72
COL27A1-208ENST00000494780 GIT1Q9Y2X7 761 aa25.82■■□□□ 1.72
COL27A1-208ENST00000494780 HES2Q9Y543 173 aa25.82■■□□□ 1.72
COL27A1-208ENST00000494780 NR1I2O75469 434 aa25.81■■□□□ 1.72
COL27A1-208ENST00000494780 ASGR2P07307 311 aa25.81■■□□□ 1.72
COL27A1-208ENST00000494780 ARF4P18085 180 aaPredicted RBP25.81■■□□□ 1.72
COL27A1-208ENST00000494780 GLRA2P23416 452 aa25.81■■□□□ 1.72
COL27A1-208ENST00000494780 C15orf39Q6ZRI6 1047 aa25.81■■□□□ 1.72
COL27A1-208ENST00000494780 CCDC149Q6ZUS6 474 aa25.81■■□□□ 1.72
COL27A1-208ENST00000494780 ACSF2Q96CM8 615 aaPredicted RBP25.81■■□□□ 1.72
COL27A1-208ENST00000494780 RPS6KC1Q96S38 1066 aa25.81■■□□□ 1.72
COL27A1-208ENST00000494780 PHOX2BQ99453 314 aa25.81■■□□□ 1.72
COL27A1-208ENST00000494780 TRIM6Q9C030 488 aaPredicted RBP25.81■■□□□ 1.72
COL27A1-208ENST00000494780 IRF2BPLQ9H1B7 796 aa25.81■■□□□ 1.72
COL27A1-208ENST00000494780 WDFY4Q6ZS81 3184 aa25.81■■□□□ 1.72
COL27A1-208ENST00000494780 MYO10Q9HD67 2058 aa25.81■■□□□ 1.72
COL27A1-208ENST00000494780 WNT7AO00755 349 aa25.8■■□□□ 1.72
COL27A1-208ENST00000494780 JAK2O60674 1132 aa25.8■■□□□ 1.72
COL27A1-208ENST00000494780 EFEMP2O95967 443 aa25.8■■□□□ 1.72
COL27A1-208ENST00000494780 SCNN1GP51170 649 aa25.8■■□□□ 1.72
COL27A1-208ENST00000494780 OTOP3Q7RTS5 596 aa25.8■■□□□ 1.72
COL27A1-208ENST00000494780 RNF168Q8IYW5 571 aaPredicted RBP25.8■■□□□ 1.72
COL27A1-208ENST00000494780 PIGOQ8TEQ8 1089 aa25.8■■□□□ 1.72
COL27A1-208ENST00000494780 POLR3FQ9H1D9 316 aaPredicted RBP25.8■■□□□ 1.72
COL27A1-208ENST00000494780 MIOSQ9NXC5 875 aa25.8■■□□□ 1.72
COL27A1-208ENST00000494780 DENND4AQ7Z401 1863 aa25.8■■□□□ 1.72
COL27A1-208ENST00000494780 C2CD2LO14523 706 aa25.79■■□□□ 1.72
COL27A1-208ENST00000494780 EIF5BO60841 1220 aaKnown RBP25.79■■□□□ 1.72
COL27A1-208ENST00000494780 ADH1AP07327 375 aa25.79■■□□□ 1.72
COL27A1-208ENST00000494780 NEK4P51957 841 aa25.79■■□□□ 1.72
COL27A1-208ENST00000494780 TAS1R1Q7RTX1 841 aa25.79■■□□□ 1.72
COL27A1-208ENST00000494780 CMASQ8NFW8 434 aaPredicted RBP25.79■■□□□ 1.72
COL27A1-208ENST00000494780 FEZF2Q8TBJ5 459 aa25.79■■□□□ 1.72
COL27A1-208ENST00000494780 ZFP42Q96MM3 310 aa25.79■■□□□ 1.72
COL27A1-208ENST00000494780 APOL6Q9BWW8 343 aa25.79■■□□□ 1.72
COL27A1-208ENST00000494780 DPP7Q9UHL4 492 aa25.79■■□□□ 1.72
COL27A1-208ENST00000494780 GLUD2P49448 558 aa25.78■■□□□ 1.72
COL27A1-208ENST00000494780 FOSBP53539 338 aa25.78■■□□□ 1.72
COL27A1-208ENST00000494780 KIAA0319Q5VV43 1072 aa25.78■■□□□ 1.72
COL27A1-208ENST00000494780 SLC27A1Q6PCB7 646 aa25.78■■□□□ 1.72
COL27A1-208ENST00000494780 ELMSAN1Q6PJG2 1045 aa25.78■■□□□ 1.72
COL27A1-208ENST00000494780 COLEC11Q9BWP8 271 aa25.78■■□□□ 1.72
COL27A1-208ENST00000494780 SMOC2Q9H3U7 446 aa25.78■■□□□ 1.72
COL27A1-208ENST00000494780 NXF3Q9H4D5 531 aaKnown RBP25.78■■□□□ 1.72
COL27A1-208ENST00000494780 RXFP1Q9HBX9 757 aa25.78■■□□□ 1.72
COL27A1-208ENST00000494780 PPP4R2Q9NY27 417 aa25.78■■□□□ 1.72
COL27A1-208ENST00000494780 ZMYM2Q9UBW7 1377 aa25.78■■□□□ 1.72
COL27A1-208ENST00000494780 A0A1B0GUA9 196 aa25.77■■□□□ 1.72
COL27A1-208ENST00000494780 POTEMA6NI47 508 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms