RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 POMKQ9H5K3 350 aa12.95□□□□□ -0.34
VTI1A-208ENST00000494728 MIOSQ9NXC5 875 aa12.95□□□□□ -0.34
VTI1A-208ENST00000494728 CNTNAP2Q9UHC6 1331 aa12.94□□□□□ -0.34
VTI1A-208ENST00000494728 FSD2A1L4K1 749 aa12.94□□□□□ -0.34
VTI1A-208ENST00000494728 ARL5CA6NH57 179 aa12.94□□□□□ -0.34
VTI1A-208ENST00000494728 INPPL1O15357 1258 aa12.94□□□□□ -0.34
VTI1A-208ENST00000494728 ASAP2O43150 1006 aa12.94□□□□□ -0.34
VTI1A-208ENST00000494728 CXCL14O95715 111 aa12.94□□□□□ -0.34
VTI1A-208ENST00000494728 SSBP05455 408 aaKnown RBP eCLIP12.94□□□□□ -0.34
VTI1A-208ENST00000494728 SCNN1GP51170 649 aa12.94□□□□□ -0.34
VTI1A-208ENST00000494728 MXD4Q14582 209 aaPredicted RBP12.94□□□□□ -0.34
VTI1A-208ENST00000494728 EXOC8Q8IYI6 725 aa12.94□□□□□ -0.34
VTI1A-208ENST00000494728 C4orf32Q8N8J7 132 aa12.94□□□□□ -0.34
VTI1A-208ENST00000494728 GSTCDQ8NEC7 633 aa12.94□□□□□ -0.34
VTI1A-208ENST00000494728 FBXO18Q8NFZ0 1043 aa12.94□□□□□ -0.34
VTI1A-208ENST00000494728 PGBD4Q96DM1 585 aa12.94□□□□□ -0.34
VTI1A-208ENST00000494728 GAD1Q99259 594 aa12.94□□□□□ -0.34
VTI1A-208ENST00000494728 APOL6Q9BWW8 343 aa12.94□□□□□ -0.34
VTI1A-208ENST00000494728 CXCL16Q9H2A7 254 aa12.94□□□□□ -0.34
VTI1A-208ENST00000494728 CACNG4Q9UBN1 327 aa12.94□□□□□ -0.34
VTI1A-208ENST00000494728 USP20Q9Y2K6 914 aa12.94□□□□□ -0.34
VTI1A-208ENST00000494728 PRG3Q9Y2Y8 225 aaPredicted RBP12.94□□□□□ -0.34
VTI1A-208ENST00000494728 IRAK3Q9Y616 596 aa12.94□□□□□ -0.34
VTI1A-208ENST00000494728 CITO14578 2027 aa12.94□□□□□ -0.34
VTI1A-208ENST00000494728 NRP1O14786 923 aa12.93□□□□□ -0.34
VTI1A-208ENST00000494728 CD2BP2O95400 341 aaKnown RBP12.93□□□□□ -0.34
VTI1A-208ENST00000494728 EFEMP2O95967 443 aa12.93□□□□□ -0.34
VTI1A-208ENST00000494728 OR52Z1P0C646 297 aa12.93□□□□□ -0.34
VTI1A-208ENST00000494728 ITGA4P13612 1032 aa12.93□□□□□ -0.34
VTI1A-208ENST00000494728 TOB1P50616 345 aaPredicted RBP12.93□□□□□ -0.34
VTI1A-208ENST00000494728 DSC1Q08554 894 aa12.93□□□□□ -0.34
VTI1A-208ENST00000494728 TTC38Q5R3I4 469 aa12.93□□□□□ -0.34
VTI1A-208ENST00000494728 RARS2Q5T160 578 aaKnown RBP12.93□□□□□ -0.34
VTI1A-208ENST00000494728 CDCA2Q69YH5 1023 aaPredicted RBP12.93□□□□□ -0.34
VTI1A-208ENST00000494728 NOTUMQ6P988 496 aa12.93□□□□□ -0.34
VTI1A-208ENST00000494728 TAS1R1Q7RTX1 841 aa12.93□□□□□ -0.34
VTI1A-208ENST00000494728 NOSTRINQ8IVI9 506 aa12.93□□□□□ -0.34
VTI1A-208ENST00000494728 COLGALT2Q8IYK4 626 aa12.93□□□□□ -0.34
VTI1A-208ENST00000494728 URGCPQ8TCY9 931 aa12.93□□□□□ -0.34
VTI1A-208ENST00000494728 SLC22A17Q8WUG5 538 aa12.93□□□□□ -0.34
VTI1A-208ENST00000494728 RSPH1Q8WYR4 309 aa12.93□□□□□ -0.34
VTI1A-208ENST00000494728 EDAQ92838 391 aa12.93□□□□□ -0.34
VTI1A-208ENST00000494728 CASP10Q92851 521 aa12.93□□□□□ -0.34
VTI1A-208ENST00000494728 FAM122AQ96E09 287 aa12.93□□□□□ -0.34
VTI1A-208ENST00000494728 LLPHQ9BRT6 129 aaKnown RBP12.93□□□□□ -0.34
VTI1A-208ENST00000494728 NFKBIZQ9BYH8 718 aa12.93□□□□□ -0.34
VTI1A-208ENST00000494728 CSRNP2Q9H175 543 aa12.93□□□□□ -0.34
VTI1A-208ENST00000494728 FOXP1Q9H334 677 aaPredicted RBP12.93□□□□□ -0.34
VTI1A-208ENST00000494728 SMOC2Q9H3U7 446 aa12.93□□□□□ -0.34
VTI1A-208ENST00000494728 POLD4Q9HCU8 107 aa12.93□□□□□ -0.34
VTI1A-208ENST00000494728 TUFT1Q9NNX1 390 aa12.93□□□□□ -0.34
VTI1A-208ENST00000494728 FRYLO94915 3013 aa12.93□□□□□ -0.34
VTI1A-208ENST00000494728 LRRIQ4A6NIV6 560 aa12.92□□□□□ -0.34
VTI1A-208ENST00000494728 C2CD4DB7Z1M9 353 aa12.92□□□□□ -0.34
VTI1A-208ENST00000494728 LILRB3O75022 631 aa12.92□□□□□ -0.34
VTI1A-208ENST00000494728 NPTXRO95502 500 aa12.92□□□□□ -0.34
VTI1A-208ENST00000494728 CNPP09543 421 aaKnown RBP12.92□□□□□ -0.34
VTI1A-208ENST00000494728 SRGAP2BP0DMP2 458 aa12.92□□□□□ -0.34
VTI1A-208ENST00000494728 HOXB8P17481 243 aaPredicted RBP12.92□□□□□ -0.34
VTI1A-208ENST00000494728 AKAP5P24588 427 aa12.92□□□□□ -0.34
VTI1A-208ENST00000494728 ZXDAP98168 799 aa12.92□□□□□ -0.34
VTI1A-208ENST00000494728 POU5F1BQ06416 359 aa12.92□□□□□ -0.34
VTI1A-208ENST00000494728 TFDP1Q14186 410 aa12.92□□□□□ -0.34
VTI1A-208ENST00000494728 SAFBQ15424 915 aaKnown RBP eCLIP12.92□□□□□ -0.34
VTI1A-208ENST00000494728 RNF168Q8IYW5 571 aaPredicted RBP12.92□□□□□ -0.34
VTI1A-208ENST00000494728 RABGGTAQ92696 567 aa12.92□□□□□ -0.34
VTI1A-208ENST00000494728 CCDC51Q96ER9 411 aa12.92□□□□□ -0.34
VTI1A-208ENST00000494728 B3GALT6Q96L58 329 aa12.92□□□□□ -0.34
VTI1A-208ENST00000494728 CCDC43Q96MW1 224 aaKnown RBP12.92□□□□□ -0.34
VTI1A-208ENST00000494728 TMEM175Q9BSA9 504 aa12.92□□□□□ -0.34
VTI1A-208ENST00000494728 POLR3CQ9BUI4 534 aaPredicted RBP12.92□□□□□ -0.34
VTI1A-208ENST00000494728 KIFC3Q9BVG8 833 aa12.92□□□□□ -0.34
VTI1A-208ENST00000494728 ADAM7Q9H2U9 754 aa12.92□□□□□ -0.34
VTI1A-208ENST00000494728 DBR1Q9UK59 544 aaKnown RBP12.92□□□□□ -0.34
VTI1A-208ENST00000494728 ZFHX2Q9C0A1 2572 aaPredicted RBP12.91□□□□□ -0.34
VTI1A-208ENST00000494728 PP2D1A8MPX8 630 aa12.91□□□□□ -0.34
VTI1A-208ENST00000494728 C2CD2LO14523 706 aa12.91□□□□□ -0.34
VTI1A-208ENST00000494728 AXLP30530 894 aa12.91□□□□□ -0.34
VTI1A-208ENST00000494728 CLCN4P51793 760 aa12.91□□□□□ -0.34
VTI1A-208ENST00000494728 TRIM67Q6ZTA4 783 aa12.91□□□□□ -0.34
VTI1A-208ENST00000494728 KLHL5Q96PQ7 755 aa12.91□□□□□ -0.34
VTI1A-208ENST00000494728 PAAF1Q9BRP4 392 aa12.91□□□□□ -0.34
VTI1A-208ENST00000494728 HERC2P3Q9BVR0 1158 aa12.91□□□□□ -0.34
VTI1A-208ENST00000494728 CCDC113Q9H0I3 377 aa12.91□□□□□ -0.34
VTI1A-208ENST00000494728 PDZD7Q9H5P4 517 aa12.91□□□□□ -0.34
VTI1A-208ENST00000494728 TSHZ2Q9NRE2 1034 aa12.91□□□□□ -0.34
VTI1A-208ENST00000494728 KLK14Q9P0G3 267 aa12.91□□□□□ -0.34
VTI1A-208ENST00000494728 ARIH1Q9Y4X5 557 aaPredicted RBP12.91□□□□□ -0.34
VTI1A-208ENST00000494728 PCDHB6Q9Y5E3 794 aa12.91□□□□□ -0.34
VTI1A-208ENST00000494728 A0A1B0GUA9 196 aa12.9□□□□□ -0.34
VTI1A-208ENST00000494728 TMEM221A6NGB7 291 aa12.9□□□□□ -0.34
VTI1A-208ENST00000494728 M0R296 226 aa12.9□□□□□ -0.34
VTI1A-208ENST00000494728 PDGFBP01127 241 aaPredicted RBP12.9□□□□□ -0.34
VTI1A-208ENST00000494728 U2AF2P26368 475 aaKnown RBP eCLIP12.9□□□□□ -0.34
VTI1A-208ENST00000494728 RPA1P27694 616 aa12.9□□□□□ -0.34
VTI1A-208ENST00000494728 OR1G1P47890 313 aa12.9□□□□□ -0.34
VTI1A-208ENST00000494728 RBM25P49756 843 aaKnown RBP12.9□□□□□ -0.34
VTI1A-208ENST00000494728 HMGN5P82970 282 aaKnown RBP12.9□□□□□ -0.34
VTI1A-208ENST00000494728 ORC2Q13416 577 aaPredicted RBP12.9□□□□□ -0.34
VTI1A-208ENST00000494728 PCBP1Q15365 356 aaKnown RBP eCLIP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms