RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 DGKIO75912 1065 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 MATR3P43243 847 aaKnown RBP eCLIP12.23□□□□□ -0.458e-7■■■■□ 24.4
APTX-230ENST00000494649 EFNA5P52803 228 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 NCKAP1LP55160 1127 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 AMPD3Q01432 767 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 SNW1Q13573 536 aaKnown RBP12.23□□□□□ -0.45
APTX-230ENST00000494649 ATF7IP2Q5U623 682 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 KRBA2Q6ZNG9 492 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 NPAS4Q8IUM7 802 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 FMR1NBQ8N0W7 255 aaPredicted RBP12.23□□□□□ -0.45
APTX-230ENST00000494649 CRIPAKQ8N1N5 446 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 CEP120Q8N960 986 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 SPIRE2Q8WWL2 714 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 RAD9AQ99638 391 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 TCHPQ9BT92 498 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 TTYH1Q9H313 450 aaPredicted RBP12.23□□□□□ -0.45
APTX-230ENST00000494649 KLK14Q9P0G3 267 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 IPPQ9Y573 584 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 CNTNAP2Q9UHC6 1331 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 A0A1B0GUA9 196 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 PBX3P40426 434 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 BTG3Q14201 252 aaPredicted RBP12.22□□□□□ -0.45
APTX-230ENST00000494649 CLLU1OSQ5K130 101 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 CCDC65Q8IXS2 484 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 SMG8Q8ND04 991 aaKnown RBP12.22□□□□□ -0.45
APTX-230ENST00000494649 NTPCRQ9BSD7 190 aaKnown RBP12.22□□□□□ -0.45
APTX-230ENST00000494649 TMEM161AQ9NX61 479 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 GDAQ9Y2T3 454 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 INSL6Q9Y581 213 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 PCDHA11Q9Y5I1 949 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 FAM237AA0A1B0GTK4 181 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 RFXAPO00287 272 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 PRPF6O94906 941 aaKnown RBP12.22□□□□□ -0.45
APTX-230ENST00000494649 STAG3L1P0CL83 205 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 PNOCQ13519 176 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 RAB30Q15771 203 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 CSPP1Q1MSJ5 1256 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 ZNF568Q3ZCX4 644 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 SLC27A1Q6PCB7 646 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 PPP4R3CPQ6ZMV5 832 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 ABI1Q8IZP0 508 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 ARNTL2Q8WYA1 636 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 PRIMPOLQ96LW4 560 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 ZFP42Q96MM3 310 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 C7orf25Q9BPX7 421 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 C17orf80Q9BSJ5 609 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 MRPL4Q9BYD3 311 aaKnown RBP12.22□□□□□ -0.45
APTX-230ENST00000494649 CXCL16Q9H2A7 254 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 ZNF576Q9H609 170 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 SLC39A2Q9NP94 309 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 PARP2Q9UGN5 583 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 TBX20Q9UMR3 447 aa12.22□□□□□ -0.45
APTX-230ENST00000494649 LINC01553A4QN01 128 aa12.21□□□□□ -0.45
APTX-230ENST00000494649 HNRNPDLO14979 420 aaKnown RBP12.21□□□□□ -0.45
APTX-230ENST00000494649 AXLP30530 894 aa12.21□□□□□ -0.45
APTX-230ENST00000494649 MLH1P40692 756 aa12.21□□□□□ -0.45
APTX-230ENST00000494649 FAM189BP81408 668 aa12.21□□□□□ -0.45
APTX-230ENST00000494649 HTRA4P83105 476 aaPredicted RBP12.21□□□□□ -0.45
APTX-230ENST00000494649 TAP1Q03518 808 aa12.21□□□□□ -0.45
APTX-230ENST00000494649 FAM160A1Q05DH4 1040 aa12.21□□□□□ -0.45
APTX-230ENST00000494649 FAM187BQ17R55 369 aa12.21□□□□□ -0.45
APTX-230ENST00000494649 SPOUT1Q5T280 376 aaKnown RBP12.21□□□□□ -0.45
APTX-230ENST00000494649 AGMOQ6ZNB7 445 aa12.21□□□□□ -0.45
APTX-230ENST00000494649 ZNF720Q7Z2F6 126 aa12.21□□□□□ -0.45
APTX-230ENST00000494649 ZNF598Q86UK7 904 aaKnown RBP12.21□□□□□ -0.45
APTX-230ENST00000494649 TMEM192Q8IY95 271 aa12.21□□□□□ -0.45
APTX-230ENST00000494649 THNSL1Q8IYQ7 743 aa12.21□□□□□ -0.45
APTX-230ENST00000494649 ENGASEQ8NFI3 743 aa12.21□□□□□ -0.45
APTX-230ENST00000494649 ACO2Q99798 780 aaKnown RBP12.21□□□□□ -0.45
APTX-230ENST00000494649 PYM1Q9BRP8 204 aaKnown RBP12.21□□□□□ -0.45
APTX-230ENST00000494649 GBP3Q9H0R5 595 aa12.21□□□□□ -0.45
APTX-230ENST00000494649 TMEM134Q9H6X4 195 aa12.21□□□□□ -0.45
APTX-230ENST00000494649 SNTG2Q9NY99 539 aa12.21□□□□□ -0.45
APTX-230ENST00000494649 COL6A3P12111 3177 aa12.21□□□□□ -0.45
APTX-230ENST00000494649 FRMD3A2A2Y4 597 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 POMCP01189 267 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 LIG4P49917 911 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 KMT5BQ4FZB7 885 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 ZNF697Q5TEC3 545 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 NELFCDQ8IXH7 590 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 DEFB123Q8N688 67 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 ZNF689Q96CS4 500 aaPredicted RBP12.2□□□□□ -0.46
APTX-230ENST00000494649 ADPGKQ9BRR6 497 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 LRRC27Q9C0I9 530 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 HAPLN2Q9GZV7 340 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 MAGEF1Q9HAY2 307 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 RC3H2Q9HBD1 1191 aaKnown RBP12.2□□□□□ -0.46
APTX-230ENST00000494649 MRPL42Q9Y6G3 142 aaKnown RBP12.2□□□□□ -0.46
APTX-230ENST00000494649 COL4A6Q14031 1691 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 PRUNE2Q8WUY3 3088 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 EPOPA6NHQ4 379 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 ANKRD63C9JTQ0 380 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 N4BP3O15049 544 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 ITGA4P13612 1032 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 GAP43P17677 238 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 GRIN2CQ14957 1233 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 PCBP1Q15365 356 aaKnown RBP eCLIP12.2□□□□□ -0.46
APTX-230ENST00000494649 ISM2Q6H9L7 571 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 LRRC55Q6ZSA7 311 aa12.2□□□□□ -0.46
APTX-230ENST00000494649 UNC13DQ70J99 1090 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms