RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 ACO2Q99798 780 aaKnown RBP15.97■□□□□ 0.15
BRCA1-223ENST00000494123 GDF15Q99988 308 aa15.97■□□□□ 0.15
BRCA1-223ENST00000494123 TCHPQ9BT92 498 aa15.97■□□□□ 0.15
BRCA1-223ENST00000494123 TRIM6Q9C030 488 aaPredicted RBP15.97■□□□□ 0.15
BRCA1-223ENST00000494123 RGS18Q9NS28 235 aa15.97■□□□□ 0.15
BRCA1-223ENST00000494123 C1orf112Q9NSG2 853 aa15.97■□□□□ 0.15
BRCA1-223ENST00000494123 A0A1B0GUA9 196 aa15.96■□□□□ 0.15
BRCA1-223ENST00000494123 TTLL13PA6NNM8 815 aa15.96■□□□□ 0.15
BRCA1-223ENST00000494123 MGEA5O60502 916 aa15.96■□□□□ 0.15
BRCA1-223ENST00000494123 KCNA1Q09470 495 aa15.96■□□□□ 0.15
BRCA1-223ENST00000494123 DSC3Q14574 896 aa15.96■□□□□ 0.15
BRCA1-223ENST00000494123 SLC27A1Q6PCB7 646 aa15.96■□□□□ 0.15
BRCA1-223ENST00000494123 NELFCDQ8IXH7 590 aa15.96■□□□□ 0.15
BRCA1-223ENST00000494123 TRIML1Q8N9V2 468 aa15.96■□□□□ 0.15
BRCA1-223ENST00000494123 ZNF507Q8TCN5 953 aa15.96■□□□□ 0.15
BRCA1-223ENST00000494123 SCFD1Q8WVM8 642 aa15.96■□□□□ 0.15
BRCA1-223ENST00000494123 TSPYL2Q9H2G4 693 aaPredicted RBP15.96■□□□□ 0.15
BRCA1-223ENST00000494123 PDZD7Q9H5P4 517 aa15.96■□□□□ 0.15
BRCA1-223ENST00000494123 ANKFY1Q9P2R3 1169 aa15.96■□□□□ 0.15
BRCA1-223ENST00000494123 TNFSF13BQ9Y275 285 aa15.96■□□□□ 0.15
BRCA1-223ENST00000494123 ENPP3O14638 875 aa15.95■□□□□ 0.14
BRCA1-223ENST00000494123 TOM1L1O75674 476 aa15.95■□□□□ 0.14
BRCA1-223ENST00000494123 AMHP03971 560 aa15.95■□□□□ 0.14
BRCA1-223ENST00000494123 RAB27AP51159 221 aa15.95■□□□□ 0.14
BRCA1-223ENST00000494123 ZNF568Q3ZCX4 644 aa15.95■□□□□ 0.14
BRCA1-223ENST00000494123 SLC24A5Q71RS6 500 aa15.95■□□□□ 0.14
BRCA1-223ENST00000494123 SMYD4Q8IYR2 804 aaPredicted RBP15.95■□□□□ 0.14
BRCA1-223ENST00000494123 LINC01599Q8WXQ3 324 aa15.95■□□□□ 0.14
BRCA1-223ENST00000494123 HERVK_113Q902F9 699 aa15.95■□□□□ 0.14
BRCA1-223ENST00000494123 RNF216Q9NWF9 866 aaPredicted RBP15.95■□□□□ 0.14
BRCA1-223ENST00000494123 TMEM63CQ9P1W3 806 aa15.95■□□□□ 0.14
BRCA1-223ENST00000494123 MAPK8IP1Q9UQF2 711 aa15.95■□□□□ 0.14
BRCA1-223ENST00000494123 CLDN3O15551 220 aa15.94■□□□□ 0.14
BRCA1-223ENST00000494123 NPTXRO95502 500 aa15.94■□□□□ 0.14
BRCA1-223ENST00000494123 PIGRP01833 764 aa15.94■□□□□ 0.14
BRCA1-223ENST00000494123 HARSP12081 509 aaKnown RBP15.94■□□□□ 0.14
BRCA1-223ENST00000494123 SKIP12755 728 aa15.94■□□□□ 0.14
BRCA1-223ENST00000494123 WDR5P61964 334 aaKnown RBP15.94■□□□□ 0.14
BRCA1-223ENST00000494123 STIM1Q13586 685 aa15.94■□□□□ 0.14
BRCA1-223ENST00000494123 MORC3Q14149 939 aa15.94■□□□□ 0.14
BRCA1-223ENST00000494123 BMT2Q1RMZ1 405 aa15.94■□□□□ 0.14
BRCA1-223ENST00000494123 DCAF4L1Q3SXM0 396 aa15.94■□□□□ 0.14
BRCA1-223ENST00000494123 EEF1DP3Q658K8 133 aa15.94■□□□□ 0.14
BRCA1-223ENST00000494123 MPZL3Q6UWV2 235 aa15.94■□□□□ 0.14
BRCA1-223ENST00000494123 ZBTB33Q86T24 672 aa15.94■□□□□ 0.14
BRCA1-223ENST00000494123 RTN4RL1Q86UN2 441 aaPredicted RBP15.94■□□□□ 0.14
BRCA1-223ENST00000494123 RNPC3Q96LT9 517 aaKnown RBP15.94■□□□□ 0.14
BRCA1-223ENST00000494123 GBP3Q9H0R5 595 aa15.94■□□□□ 0.14
BRCA1-223ENST00000494123 FAM105AQ9NUU6 356 aa15.94■□□□□ 0.14
BRCA1-223ENST00000494123 LRFN2Q9ULH4 789 aa15.94■□□□□ 0.14
BRCA1-223ENST00000494123 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.94■□□□□ 0.14
BRCA1-223ENST00000494123 NOLC1Q14978 699 aaKnown RBP eCLIP15.94■□□□□ 0.14
BRCA1-223ENST00000494123 KNOP1Q1ED39 458 aaKnown RBP15.94■□□□□ 0.14
BRCA1-223ENST00000494123 C9orf50Q5SZB4 431 aa15.94■□□□□ 0.14
BRCA1-223ENST00000494123 SLFN12LQ6IEE8 588 aa15.94■□□□□ 0.14
BRCA1-223ENST00000494123 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.94■□□□□ 0.14
BRCA1-223ENST00000494123 HS2ST1Q7LGA3 356 aa15.94■□□□□ 0.14
BRCA1-223ENST00000494123 GUF1Q8N442 669 aaKnown RBP15.94■□□□□ 0.14
BRCA1-223ENST00000494123 RNF169Q8NCN4 708 aa15.94■□□□□ 0.14
BRCA1-223ENST00000494123 TRAIPQ9BWF2 469 aa15.94■□□□□ 0.14
BRCA1-223ENST00000494123 EIF2AQ9BY44 585 aaKnown RBP15.94■□□□□ 0.14
BRCA1-223ENST00000494123 PCDHB2Q9Y5E7 798 aa15.94■□□□□ 0.14
BRCA1-223ENST00000494123 SLC4A7Q9Y6M7 1214 aa15.94■□□□□ 0.14
BRCA1-223ENST00000494123 ZMYM2Q9UBW7 1377 aa15.93■□□□□ 0.14
BRCA1-223ENST00000494123 A0A0U1RQF3 1178 aa15.93■□□□□ 0.14
BRCA1-223ENST00000494123 C9IYK1 514 aa15.93■□□□□ 0.14
BRCA1-223ENST00000494123 ANKRD63C9JTQ0 380 aa15.93■□□□□ 0.14
BRCA1-223ENST00000494123 STAG3L1P0CL83 205 aa15.93■□□□□ 0.14
BRCA1-223ENST00000494123 BMP8BP34820 402 aa15.93■□□□□ 0.14
BRCA1-223ENST00000494123 PPP1R2P41236 205 aa15.93■□□□□ 0.14
BRCA1-223ENST00000494123 SHHQ15465 462 aa15.93■□□□□ 0.14
BRCA1-223ENST00000494123 UBXN11Q5T124 520 aa15.93■□□□□ 0.14
BRCA1-223ENST00000494123 SASS6Q6UVJ0 657 aa15.93■□□□□ 0.14
BRCA1-223ENST00000494123 CHRDL2Q6WN34 429 aa15.93■□□□□ 0.14
BRCA1-223ENST00000494123 HACE1Q8IYU2 909 aa15.93■□□□□ 0.14
BRCA1-223ENST00000494123 ZBTB45Q96K62 511 aaPredicted RBP15.93■□□□□ 0.14
BRCA1-223ENST00000494123 CDT1Q9H211 546 aa15.93■□□□□ 0.14
BRCA1-223ENST00000494123 IKZF4Q9H2S9 585 aa15.93■□□□□ 0.14
BRCA1-223ENST00000494123 PTPRHQ9HD43 1115 aa15.93■□□□□ 0.14
BRCA1-223ENST00000494123 CXXC1Q9P0U4 656 aaPredicted RBP15.93■□□□□ 0.14
BRCA1-223ENST00000494123 TISP43B9A030 160 aa15.92■□□□□ 0.14
BRCA1-223ENST00000494123 UPP2O95045 317 aa15.92■□□□□ 0.14
BRCA1-223ENST00000494123 MCF2P10911 925 aa15.92■□□□□ 0.14
BRCA1-223ENST00000494123 PROZP22891 400 aa15.92■□□□□ 0.14
BRCA1-223ENST00000494123 HOXD13P35453 343 aa15.92■□□□□ 0.14
BRCA1-223ENST00000494123 PRCPP42785 496 aa15.92■□□□□ 0.14
BRCA1-223ENST00000494123 DEFB103AP81534 67 aa15.92■□□□□ 0.14
BRCA1-223ENST00000494123 SLC39A4Q6P5W5 647 aa15.92■□□□□ 0.14
BRCA1-223ENST00000494123 RBM43Q6ZSC3 357 aaKnown RBP15.92■□□□□ 0.14
BRCA1-223ENST00000494123 ECHDC2Q86YB7 292 aa15.92■□□□□ 0.14
BRCA1-223ENST00000494123 GOLGA5Q8TBA6 731 aa15.92■□□□□ 0.14
BRCA1-223ENST00000494123 POMGNT1Q8WZA1 660 aa15.92■□□□□ 0.14
BRCA1-223ENST00000494123 PGBD4Q96DM1 585 aa15.92■□□□□ 0.14
BRCA1-223ENST00000494123 SLC9A7Q96T83 725 aa15.92■□□□□ 0.14
BRCA1-223ENST00000494123 MSTO1Q9BUK6 570 aa15.92■□□□□ 0.14
BRCA1-223ENST00000494123 APOL6Q9BWW8 343 aa15.92■□□□□ 0.14
BRCA1-223ENST00000494123 TYW1Q9NV66 732 aaKnown RBP15.92■□□□□ 0.14
BRCA1-223ENST00000494123 IPPQ9Y573 584 aa15.92■□□□□ 0.14
BRCA1-223ENST00000494123 PCDHB7Q9Y5E2 793 aa15.92■□□□□ 0.14
BRCA1-223ENST00000494123 PSMA7O14818 248 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms