RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 RAB27AP51159 221 aa9.48□□□□□ -0.89
LRCH3-219ENST00000494069 KRT17Q04695 432 aa9.48□□□□□ -0.89
LRCH3-219ENST00000494069 RNASELQ05823 741 aaKnown RBP9.48□□□□□ -0.89
LRCH3-219ENST00000494069 COASYQ13057 564 aa9.48□□□□□ -0.89
LRCH3-219ENST00000494069 PTGDRQ13258 359 aa9.48□□□□□ -0.89
LRCH3-219ENST00000494069 GNL2Q13823 731 aaKnown RBP9.48□□□□□ -0.89
LRCH3-219ENST00000494069 PDE12Q6L8Q7 609 aaKnown RBP9.48□□□□□ -0.89
LRCH3-219ENST00000494069 KANK3Q6NY19 840 aa9.48□□□□□ -0.89
LRCH3-219ENST00000494069 SYCE2Q6PIF2 218 aa9.48□□□□□ -0.89
LRCH3-219ENST00000494069 MRPL43Q8N983 215 aaKnown RBP9.48□□□□□ -0.89
LRCH3-219ENST00000494069 SMRP1Q8NCR6 262 aa9.48□□□□□ -0.89
LRCH3-219ENST00000494069 PGBD4Q96DM1 585 aa9.48□□□□□ -0.89
LRCH3-219ENST00000494069 IGSF21Q96ID5 467 aa9.48□□□□□ -0.89
LRCH3-219ENST00000494069 CCDC43Q96MW1 224 aaKnown RBP9.48□□□□□ -0.89
LRCH3-219ENST00000494069 LRFN3Q9BTN0 628 aa9.48□□□□□ -0.89
LRCH3-219ENST00000494069 APOL6Q9BWW8 343 aa9.48□□□□□ -0.89
LRCH3-219ENST00000494069 MRPL9Q9BYD2 267 aaKnown RBP9.48□□□□□ -0.89
LRCH3-219ENST00000494069 RSAD1Q9HA92 442 aa9.48□□□□□ -0.89
LRCH3-219ENST00000494069 BOLA1Q9Y3E2 137 aa9.48□□□□□ -0.89
LRCH3-219ENST00000494069 IPPQ9Y573 584 aa9.48□□□□□ -0.89
LRCH3-219ENST00000494069 LRRIQ4A6NIV6 560 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 F8W810 466 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 CLASP2O75122 1294 aaKnown RBP9.47□□□□□ -0.89
LRCH3-219ENST00000494069 CXCL14O95715 111 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 EDN1P05305 212 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 ITGA4P13612 1032 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 AKAP5P24588 427 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 RPA1P27694 616 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 CDC25AP30304 524 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 CA8P35219 290 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 CCT6AP40227 531 aaKnown RBP9.47□□□□□ -0.89
LRCH3-219ENST00000494069 MLH1P40692 756 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 POU5F1BQ06416 359 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 TFDP1Q14186 410 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 MCTP1Q6DN14 999 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 ANKRD54Q6NXT1 300 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 NOTUMQ6P988 496 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 PADI6Q6TGC4 694 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 VPS52Q8N1B4 723 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 TMEM169Q96HH4 297 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 ZFP42Q96MM3 310 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 NACC1Q96RE7 527 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 GAD1Q99259 594 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 CDCA3Q99618 268 aaPredicted RBP9.47□□□□□ -0.89
LRCH3-219ENST00000494069 KIFC3Q9BVG8 833 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 C1QTNF1Q9BXJ1 281 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 ZBP1Q9H171 429 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 CSRNP2Q9H175 543 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 S1PR5Q9H228 398 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 CXCL16Q9H2A7 254 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 NXF3Q9H4D5 531 aaKnown RBP9.47□□□□□ -0.89
LRCH3-219ENST00000494069 NGRNQ9NPE2 291 aaKnown RBP9.47□□□□□ -0.89
LRCH3-219ENST00000494069 KLK14Q9P0G3 267 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 PRKAG3Q9UGI9 489 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 DBR1Q9UK59 544 aaKnown RBP9.47□□□□□ -0.89
LRCH3-219ENST00000494069 NOL7Q9UMY1 257 aaKnown RBP9.47□□□□□ -0.89
LRCH3-219ENST00000494069 KIAA1024Q9UPX6 916 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 FAM50BQ9Y247 325 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 HCFC2Q9Y5Z7 792 aa9.47□□□□□ -0.89
LRCH3-219ENST00000494069 ARHGEF35A5YM69 484 aa9.46□□□□□ -0.9
LRCH3-219ENST00000494069 ARL5CA6NH57 179 aa9.46□□□□□ -0.9
LRCH3-219ENST00000494069 NRP1O14786 923 aa9.46□□□□□ -0.9
LRCH3-219ENST00000494069 ST18O60284 1047 aa9.46□□□□□ -0.9
LRCH3-219ENST00000494069 NPTXRO95502 500 aa9.46□□□□□ -0.9
LRCH3-219ENST00000494069 SSBP05455 408 aaKnown RBP eCLIP9.46□□□□□ -0.9
LRCH3-219ENST00000494069 CYP11B2P19099 503 aa9.46□□□□□ -0.9
LRCH3-219ENST00000494069 GJB2P29033 226 aa9.46□□□□□ -0.9
LRCH3-219ENST00000494069 AXLP30530 894 aa9.46□□□□□ -0.9
LRCH3-219ENST00000494069 TRAPPC10P48553 1259 aa9.46□□□□□ -0.9
LRCH3-219ENST00000494069 SCNN1GP51170 649 aa9.46□□□□□ -0.9
LRCH3-219ENST00000494069 ORC2Q13416 577 aaPredicted RBP9.46□□□□□ -0.9
LRCH3-219ENST00000494069 SMC1AQ14683 1233 aaKnown RBP9.46□□□□□ -0.9
LRCH3-219ENST00000494069 TMEM31Q5JXX7 168 aa9.46□□□□□ -0.9
LRCH3-219ENST00000494069 TMEM184AQ6ZMB5 413 aa9.46□□□□□ -0.9
LRCH3-219ENST00000494069 TAS1R1Q7RTX1 841 aa9.46□□□□□ -0.9
LRCH3-219ENST00000494069 DDX53Q86TM3 631 aaKnown RBP9.46□□□□□ -0.9
LRCH3-219ENST00000494069 C12orf76Q8N812 135 aaPredicted RBP9.46□□□□□ -0.9
LRCH3-219ENST00000494069 GSTCDQ8NEC7 633 aa9.46□□□□□ -0.9
LRCH3-219ENST00000494069 ERMNQ8TAM6 284 aa9.46□□□□□ -0.9
LRCH3-219ENST00000494069 URGCPQ8TCY9 931 aa9.46□□□□□ -0.9
LRCH3-219ENST00000494069 SUSD6Q92537 303 aa9.46□□□□□ -0.9
LRCH3-219ENST00000494069 RABGGTAQ92696 567 aa9.46□□□□□ -0.9
LRCH3-219ENST00000494069 TBC1D32Q96NH3 1257 aa9.46□□□□□ -0.9
LRCH3-219ENST00000494069 NFKBIZQ9BYH8 718 aa9.46□□□□□ -0.9
LRCH3-219ENST00000494069 BHMT2Q9H2M3 363 aa9.46□□□□□ -0.9
LRCH3-219ENST00000494069 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.46□□□□□ -0.9
LRCH3-219ENST00000494069 DDX19AQ9NUU7 478 aaKnown RBP9.46□□□□□ -0.9
LRCH3-219ENST00000494069 MARCH5Q9NX47 278 aa9.46□□□□□ -0.9
LRCH3-219ENST00000494069 CACNG4Q9UBN1 327 aa9.46□□□□□ -0.9
LRCH3-219ENST00000494069 LRWD1Q9UFC0 647 aa9.46□□□□□ -0.9
LRCH3-219ENST00000494069 MUTYHQ9UIF7 546 aa9.46□□□□□ -0.9
LRCH3-219ENST00000494069 PRG3Q9Y2Y8 225 aaPredicted RBP9.46□□□□□ -0.9
LRCH3-219ENST00000494069 A0A1B0GUA9 196 aa9.45□□□□□ -0.9
LRCH3-219ENST00000494069 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.45□□□□□ -0.9
LRCH3-219ENST00000494069 E9PMD0 336 aa9.45□□□□□ -0.9
LRCH3-219ENST00000494069 ALDH2P05091 517 aa9.45□□□□□ -0.9
LRCH3-219ENST00000494069 WEE2P0C1S8 567 aa9.45□□□□□ -0.9
LRCH3-219ENST00000494069 CTSAP10619 480 aa9.45□□□□□ -0.9
LRCH3-219ENST00000494069 EPCAMP16422 314 aa9.45□□□□□ -0.9
LRCH3-219ENST00000494069 LIG1P18858 919 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms