RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 SMCHD1A6NHR9 2005 aa7.5□□□□□ -1.21
TRA2B-216ENST00000493864 PTPRFP10586 1907 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 CCL15-CCL14A0A0B4J2E2 113 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 FAM155AB1AL88 458 aaPredicted RBP7.49□□□□□ -1.21
TRA2B-216ENST00000493864 RBAK-RBAKDNI3L0D1 243 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 VWA5AO00534 786 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 TNFRSF10CO14798 259 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 PEX10O60683 326 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 ZBED4O75132 1171 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 UBOX5O94941 541 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 TGFB1P01137 390 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 ZBTB48P10074 688 aaPredicted RBP7.49□□□□□ -1.21
TRA2B-216ENST00000493864 ACRP10323 421 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 ATP2B1P20020 1258 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 GUCY2CP25092 1073 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 ITGB7P26010 798 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 HOXA7P31268 230 aaPredicted RBP7.49□□□□□ -1.21
TRA2B-216ENST00000493864 ETFBP38117 255 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 ETV3P41162 512 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 NAPAP54920 295 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 NLRP5P59047 1200 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 RESTQ13127 1097 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 TRIM29Q14134 588 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 NPY5RQ15761 445 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 CCL15Q16663 113 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 USH1GQ495M9 461 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 MCTP1Q6DN14 999 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 ZNF746Q6NUN9 644 aaPredicted RBP7.49□□□□□ -1.21
TRA2B-216ENST00000493864 CPXCR1Q8N123 301 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 FAM169BQ8N8A8 192 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 CHAMP1Q96JM3 812 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 HEXIM2Q96MH2 286 aaKnown RBP7.49□□□□□ -1.21
TRA2B-216ENST00000493864 PTPN18Q99952 460 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 PHF20Q9BVI0 1012 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 ASCC2Q9H1I8 757 aaPredicted RBP7.49□□□□□ -1.21
TRA2B-216ENST00000493864 RANBP17Q9H2T7 1088 aaKnown RBP7.49□□□□□ -1.21
TRA2B-216ENST00000493864 SLC38A10Q9HBR0 1119 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 RAVER2Q9HCJ3 691 aaKnown RBP7.49□□□□□ -1.21
TRA2B-216ENST00000493864 SH3GLB2Q9NR46 395 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 GTF2IRD1Q9UHL9 959 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 ADAMTS5Q9UNA0 930 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 AGTPBP1Q9UPW5 1226 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 PCDHA1Q9Y5I3 950 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 ZNF536O15090 1300 aa7.49□□□□□ -1.21
TRA2B-216ENST00000493864 RLFQ13129 1914 aa7.48□□□□□ -1.21
TRA2B-216ENST00000493864 SMCO2A6NFE2 343 aa7.48□□□□□ -1.21
TRA2B-216ENST00000493864 PRR19A6NJB7 356 aa7.48□□□□□ -1.21
TRA2B-216ENST00000493864 BTBD18B2RXH4 712 aa7.48□□□□□ -1.21
TRA2B-216ENST00000493864 KIF28PB7ZC32 967 aa7.48□□□□□ -1.21
TRA2B-216ENST00000493864 BTBD19C9JJ37 291 aa7.48□□□□□ -1.21
TRA2B-216ENST00000493864 CYP26A1O43174 497 aa7.48□□□□□ -1.21
TRA2B-216ENST00000493864 MMP1P03956 469 aa7.48□□□□□ -1.21
TRA2B-216ENST00000493864 ICAM1P05362 532 aa7.48□□□□□ -1.21
TRA2B-216ENST00000493864 XBP1P17861 261 aa7.48□□□□□ -1.21
TRA2B-216ENST00000493864 IRX3P78415 501 aaPredicted RBP7.48□□□□□ -1.21
TRA2B-216ENST00000493864 KIF23Q02241 960 aaPredicted RBP7.48□□□□□ -1.21
TRA2B-216ENST00000493864 PPP2R5EQ16537 467 aa7.48□□□□□ -1.21
TRA2B-216ENST00000493864 CPSF6Q16630 551 aaKnown RBP eCLIP7.48□□□□□ -1.21
TRA2B-216ENST00000493864 FAM173BQ6P4H8 233 aa7.48□□□□□ -1.21
TRA2B-216ENST00000493864 FAM214BQ7L5A3 538 aa7.48□□□□□ -1.21
TRA2B-216ENST00000493864 DIS3L2Q8IYB7 885 aaKnown RBP7.48□□□□□ -1.21
TRA2B-216ENST00000493864 FAM43AQ8N2R8 423 aa7.48□□□□□ -1.21
TRA2B-216ENST00000493864 FAM181AQ8N9Y4 354 aa7.48□□□□□ -1.21
TRA2B-216ENST00000493864 REPS2Q8NFH8 660 aa7.48□□□□□ -1.21
TRA2B-216ENST00000493864 TBC1D5Q92609 795 aa7.48□□□□□ -1.21
TRA2B-216ENST00000493864 TNPO1Q92973 898 aaKnown RBP7.48□□□□□ -1.21
TRA2B-216ENST00000493864 AMNQ9BXJ7 453 aa7.48□□□□□ -1.21
TRA2B-216ENST00000493864 CTDP1Q9Y5B0 961 aaPredicted RBP7.48□□□□□ -1.21
TRA2B-216ENST00000493864 MANSC4A6NHS7 340 aaPredicted RBP7.47□□□□□ -1.21
TRA2B-216ENST00000493864 PDHXO00330 501 aa7.47□□□□□ -1.21
TRA2B-216ENST00000493864 SMAD7O15105 426 aaKnown RBP7.47□□□□□ -1.21
TRA2B-216ENST00000493864 CBX7O95931 251 aa7.47□□□□□ -1.21
TRA2B-216ENST00000493864 CYP2C8P10632 490 aa7.47□□□□□ -1.21
TRA2B-216ENST00000493864 HSPA8P11142 646 aaKnown RBP7.47□□□□□ -1.21
TRA2B-216ENST00000493864 ALAS1P13196 640 aa7.47□□□□□ -1.21
TRA2B-216ENST00000493864 U2AF2P26368 475 aaKnown RBP eCLIP7.47□□□□□ -1.211e-15■□□□□ 8.6
TRA2B-216ENST00000493864 CALML3P27482 149 aa7.47□□□□□ -1.21
TRA2B-216ENST00000493864 GTF2F1P35269 517 aaKnown RBP eCLIP7.47□□□□□ -1.21
TRA2B-216ENST00000493864 LBX1P52954 281 aa7.47□□□□□ -1.21
TRA2B-216ENST00000493864 HERVK_113P62684 666 aa7.47□□□□□ -1.21
TRA2B-216ENST00000493864 PABPC4Q13310 644 aaKnown RBP eCLIP7.47□□□□□ -1.21
TRA2B-216ENST00000493864 TMEM132BQ14DG7 1078 aa7.47□□□□□ -1.21
TRA2B-216ENST00000493864 SAFBQ15424 915 aaKnown RBP eCLIP7.47□□□□□ -1.21
TRA2B-216ENST00000493864 SF3A1Q15459 793 aaKnown RBP7.47□□□□□ -1.21
TRA2B-216ENST00000493864 SFRP5Q5T4F7 317 aa7.47□□□□□ -1.21
TRA2B-216ENST00000493864 LBX2Q6XYB7 198 aa7.47□□□□□ -1.21
TRA2B-216ENST00000493864 UNC5AQ6ZN44 842 aa7.47□□□□□ -1.21
TRA2B-216ENST00000493864 ANKRD23Q86SG2 305 aa7.47□□□□□ -1.21
TRA2B-216ENST00000493864 BLIDQ8IZY5 108 aa7.47□□□□□ -1.21
TRA2B-216ENST00000493864 TAB3Q8N5C8 712 aaPredicted RBP7.47□□□□□ -1.21
TRA2B-216ENST00000493864 SREK1Q8WXA9 508 aaKnown RBP7.47□□□□□ -1.21
TRA2B-216ENST00000493864 HHIPL1Q96JK4 782 aa7.47□□□□□ -1.21
TRA2B-216ENST00000493864 ZMYND12Q9H0C1 365 aa7.47□□□□□ -1.21
TRA2B-216ENST00000493864 PSTPIP2Q9H939 334 aa7.47□□□□□ -1.21
TRA2B-216ENST00000493864 C6orf50Q9HD87 102 aa7.47□□□□□ -1.21
TRA2B-216ENST00000493864 RIC8AQ9NPQ8 531 aa7.47□□□□□ -1.21
TRA2B-216ENST00000493864 TMEM260Q9NX78 707 aa7.47□□□□□ -1.21
TRA2B-216ENST00000493864 BTBD7Q9P203 1132 aa7.47□□□□□ -1.21
TRA2B-216ENST00000493864 RBPJLQ9UBG7 517 aa7.47□□□□□ -1.21
TRA2B-216ENST00000493864 CCPG1Q9ULG6 757 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms