RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 PFKFB2O60825 505 aa19.37■□□□□ 0.69
COL9A1-210ENST00000493682 ERLIN2O94905 339 aa19.37■□□□□ 0.69
COL9A1-210ENST00000493682 SOD2P04179 222 aa19.37■□□□□ 0.69
COL9A1-210ENST00000493682 ITGA4P13612 1032 aa19.37■□□□□ 0.69
COL9A1-210ENST00000493682 ASTLQ6HA08 431 aaPredicted RBP19.37■□□□□ 0.69
COL9A1-210ENST00000493682 CCDC149Q6ZUS6 474 aa19.37■□□□□ 0.69
COL9A1-210ENST00000493682 OTOP3Q7RTS5 596 aa19.37■□□□□ 0.69
COL9A1-210ENST00000493682 TPH2Q8IWU9 490 aa19.37■□□□□ 0.69
COL9A1-210ENST00000493682 COLGALT2Q8IYK4 626 aa19.37■□□□□ 0.69
COL9A1-210ENST00000493682 SLFN12Q8IYM2 578 aa19.37■□□□□ 0.69
COL9A1-210ENST00000493682 EIF2AQ9BY44 585 aaKnown RBP19.37■□□□□ 0.69
COL9A1-210ENST00000493682 MARCH5Q9NX47 278 aa19.37■□□□□ 0.69
COL9A1-210ENST00000493682 TPCN1Q9ULQ1 816 aa19.37■□□□□ 0.69
COL9A1-210ENST00000493682 PRG3Q9Y2Y8 225 aaPredicted RBP19.37■□□□□ 0.69
COL9A1-210ENST00000493682 IPPQ9Y573 584 aa19.37■□□□□ 0.69
COL9A1-210ENST00000493682 ARL5CA6NH57 179 aa19.36■□□□□ 0.69
COL9A1-210ENST00000493682 INPPL1O15357 1258 aa19.36■□□□□ 0.69
COL9A1-210ENST00000493682 SLITRK3O94933 977 aa19.36■□□□□ 0.69
COL9A1-210ENST00000493682 BAG4O95429 457 aaKnown RBP19.36■□□□□ 0.69
COL9A1-210ENST00000493682 URODP06132 367 aa19.36■□□□□ 0.69
COL9A1-210ENST00000493682 AXLP30530 894 aa19.36■□□□□ 0.69
COL9A1-210ENST00000493682 AK2P54819 239 aa19.36■□□□□ 0.69
COL9A1-210ENST00000493682 PTENP60484 403 aa19.36■□□□□ 0.69
COL9A1-210ENST00000493682 MXD4Q14582 209 aaPredicted RBP19.36■□□□□ 0.69
COL9A1-210ENST00000493682 PCBP1Q15365 356 aaKnown RBP eCLIP19.36■□□□□ 0.69
COL9A1-210ENST00000493682 NOTUMQ6P988 496 aa19.36■□□□□ 0.69
COL9A1-210ENST00000493682 C15orf39Q6ZRI6 1047 aa19.36■□□□□ 0.69
COL9A1-210ENST00000493682 TAS1R1Q7RTX1 841 aa19.36■□□□□ 0.69
COL9A1-210ENST00000493682 RPS6KC1Q96S38 1066 aa19.36■□□□□ 0.69
COL9A1-210ENST00000493682 GAD1Q99259 594 aa19.36■□□□□ 0.69
COL9A1-210ENST00000493682 HERC2P3Q9BVR0 1158 aa19.36■□□□□ 0.69
COL9A1-210ENST00000493682 MFSD1Q9H3U5 465 aa19.36■□□□□ 0.69
COL9A1-210ENST00000493682 XPNPEP1Q9NQW7 623 aa19.36■□□□□ 0.69
COL9A1-210ENST00000493682 HES2Q9Y543 173 aa19.36■□□□□ 0.69
COL9A1-210ENST00000493682 CACNA1HO95180 2353 aa19.35■□□□□ 0.69
COL9A1-210ENST00000493682 CTDNEP1O95476 244 aa19.35■□□□□ 0.69
COL9A1-210ENST00000493682 EFEMP2O95967 443 aa19.35■□□□□ 0.69
COL9A1-210ENST00000493682 MLH1P40692 756 aa19.35■□□□□ 0.69
COL9A1-210ENST00000493682 OR1G1P47890 313 aa19.35■□□□□ 0.69
COL9A1-210ENST00000493682 CLCN5P51795 746 aa19.35■□□□□ 0.69
COL9A1-210ENST00000493682 DSC1Q08554 894 aa19.35■□□□□ 0.69
COL9A1-210ENST00000493682 NR5A1Q13285 461 aa19.35■□□□□ 0.69
COL9A1-210ENST00000493682 RNF168Q8IYW5 571 aaPredicted RBP19.35■□□□□ 0.69
COL9A1-210ENST00000493682 CCDC51Q96ER9 411 aa19.35■□□□□ 0.69
COL9A1-210ENST00000493682 CPB2Q96IY4 423 aa19.35■□□□□ 0.69
COL9A1-210ENST00000493682 EIF2AK1Q9BQI3 630 aaKnown RBP19.35■□□□□ 0.69
COL9A1-210ENST00000493682 MAN1C1Q9NR34 630 aa19.35■□□□□ 0.69
COL9A1-210ENST00000493682 MIOSQ9NXC5 875 aa19.35■□□□□ 0.69
COL9A1-210ENST00000493682 ORC3Q9UBD5 711 aaPredicted RBP19.35■□□□□ 0.69
COL9A1-210ENST00000493682 SSX2IPQ9Y2D8 614 aa19.35■□□□□ 0.69
COL9A1-210ENST00000493682 ARID2Q68CP9 1835 aa19.35■□□□□ 0.69
COL9A1-210ENST00000493682 PROB1E7EW31 1015 aa19.34■□□□□ 0.69
COL9A1-210ENST00000493682 INO80B-WBP1J3KQ70 363 aa19.34■□□□□ 0.69
COL9A1-210ENST00000493682 TEX28O15482 410 aa19.34■□□□□ 0.69
COL9A1-210ENST00000493682 ADH1AP07327 375 aa19.34■□□□□ 0.69
COL9A1-210ENST00000493682 NCBP1Q09161 790 aaKnown RBP19.34■□□□□ 0.69
COL9A1-210ENST00000493682 TDGQ13569 410 aa19.34■□□□□ 0.69
COL9A1-210ENST00000493682 TFDP1Q14186 410 aa19.34■□□□□ 0.69
COL9A1-210ENST00000493682 KIAA0319Q5VV43 1072 aa19.34■□□□□ 0.69
COL9A1-210ENST00000493682 IFNLR1Q8IU57 520 aaPredicted RBP19.34■□□□□ 0.69
COL9A1-210ENST00000493682 CMASQ8NFW8 434 aaPredicted RBP19.34■□□□□ 0.69
COL9A1-210ENST00000493682 TNFRSF25Q93038 417 aa19.34■□□□□ 0.69
COL9A1-210ENST00000493682 ZFP42Q96MM3 310 aa19.34■□□□□ 0.69
COL9A1-210ENST00000493682 HSD17B14Q9BPX1 270 aa19.34■□□□□ 0.69
COL9A1-210ENST00000493682 CSRNP2Q9H175 543 aa19.34■□□□□ 0.69
COL9A1-210ENST00000493682 F8W810 466 aa19.33■□□□□ 0.68
COL9A1-210ENST00000493682 LYPLA2O95372 231 aa19.33■□□□□ 0.68
COL9A1-210ENST00000493682 KRT2P35908 639 aa19.33■□□□□ 0.68
COL9A1-210ENST00000493682 GLUD2P49448 558 aa19.33■□□□□ 0.68
COL9A1-210ENST00000493682 SCNN1GP51170 649 aa19.33■□□□□ 0.68
COL9A1-210ENST00000493682 MBTD1Q05BQ5 628 aa19.33■□□□□ 0.68
COL9A1-210ENST00000493682 POU5F1BQ06416 359 aa19.33■□□□□ 0.68
COL9A1-210ENST00000493682 CAPSQ13938 189 aa19.33■□□□□ 0.68
COL9A1-210ENST00000493682 AMHR2Q16671 573 aa19.33■□□□□ 0.68
COL9A1-210ENST00000493682 ASAP3Q8TDY4 903 aa19.33■□□□□ 0.68
COL9A1-210ENST00000493682 WASF1Q92558 559 aa19.33■□□□□ 0.68
COL9A1-210ENST00000493682 APOL6Q9BWW8 343 aa19.33■□□□□ 0.68
COL9A1-210ENST00000493682 KCNK12Q9HB15 430 aa19.33■□□□□ 0.68
COL9A1-210ENST00000493682 RXFP1Q9HBX9 757 aa19.33■□□□□ 0.68
COL9A1-210ENST00000493682 ANKEF1Q9NU02 776 aa19.33■□□□□ 0.68
COL9A1-210ENST00000493682 PCDHA12Q9UN75 941 aa19.33■□□□□ 0.68
COL9A1-210ENST00000493682 PLXNA3P51805 1871 aa19.33■□□□□ 0.68
COL9A1-210ENST00000493682 ZFHX2Q9C0A1 2572 aaPredicted RBP19.33■□□□□ 0.68
COL9A1-210ENST00000493682 C2orf16Q68DN1 1984 aa19.32■□□□□ 0.68
COL9A1-210ENST00000493682 CCDC195A0A1B0GUA6 201 aa19.32■□□□□ 0.68
COL9A1-210ENST00000493682 DGAT1O75907 488 aa19.32■□□□□ 0.68
COL9A1-210ENST00000493682 GLUD1P00367 558 aa19.32■□□□□ 0.68
COL9A1-210ENST00000493682 FDPSP14324 419 aaKnown RBP19.32■□□□□ 0.68
COL9A1-210ENST00000493682 ARF4P18085 180 aaPredicted RBP19.32■□□□□ 0.68
COL9A1-210ENST00000493682 ARL2P36404 184 aa19.32■□□□□ 0.68
COL9A1-210ENST00000493682 CWF19L1Q69YN2 538 aaKnown RBP19.32■□□□□ 0.68
COL9A1-210ENST00000493682 FLCNQ8NFG4 579 aa19.32■□□□□ 0.68
COL9A1-210ENST00000493682 NXF3Q9H4D5 531 aaKnown RBP19.32■□□□□ 0.68
COL9A1-210ENST00000493682 DUSP12Q9UNI6 340 aa19.32■□□□□ 0.68
COL9A1-210ENST00000493682 GIT1Q9Y2X7 761 aa19.32■□□□□ 0.68
COL9A1-210ENST00000493682 N4BP1O75113 896 aaKnown RBP19.31■□□□□ 0.68
COL9A1-210ENST00000493682 NR1I2O75469 434 aa19.31■□□□□ 0.68
COL9A1-210ENST00000493682 MYBP10242 640 aa19.31■□□□□ 0.68
COL9A1-210ENST00000493682 NPR3P17342 541 aa19.31■□□□□ 0.68
COL9A1-210ENST00000493682 GLRA2P23416 452 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms