RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 MBTD1Q05BQ5 628 aa18.47■□□□□ 0.55
PTPRU-208ENST00000493601 SAFBQ15424 915 aaKnown RBP eCLIP18.47■□□□□ 0.55
PTPRU-208ENST00000493601 ASAP3Q8TDY4 903 aa18.47■□□□□ 0.55
PTPRU-208ENST00000493601 SLC22A17Q8WUG5 538 aa18.47■□□□□ 0.55
PTPRU-208ENST00000493601 CPB2Q96IY4 423 aa18.47■□□□□ 0.55
PTPRU-208ENST00000493601 PRRX2Q99811 253 aa18.47■□□□□ 0.55
PTPRU-208ENST00000493601 EIF2AQ9BY44 585 aaKnown RBP18.47■□□□□ 0.55
PTPRU-208ENST00000493601 TRIM6Q9C030 488 aaPredicted RBP18.47■□□□□ 0.55
PTPRU-208ENST00000493601 SFXN1Q9H9B4 322 aa18.47■□□□□ 0.55
PTPRU-208ENST00000493601 MRPL17Q9NRX2 175 aaKnown RBP18.47■□□□□ 0.55
PTPRU-208ENST00000493601 ARL5CA6NH57 179 aa18.46■□□□□ 0.55
PTPRU-208ENST00000493601 POTEMA6NI47 508 aa18.46■□□□□ 0.55
PTPRU-208ENST00000493601 SPDYE4A6NLX3 237 aa18.46■□□□□ 0.55
PTPRU-208ENST00000493601 C2CD4DB7Z1M9 353 aa18.46■□□□□ 0.55
PTPRU-208ENST00000493601 WNT7AO00755 349 aa18.46■□□□□ 0.55
PTPRU-208ENST00000493601 NRP1O14786 923 aa18.46■□□□□ 0.55
PTPRU-208ENST00000493601 MLH1P40692 756 aa18.46■□□□□ 0.55
PTPRU-208ENST00000493601 MTMR3Q13615 1198 aa18.46■□□□□ 0.55
PTPRU-208ENST00000493601 ATAT1Q5SQI0 421 aa18.46■□□□□ 0.55
PTPRU-208ENST00000493601 C12orf76Q8N812 135 aaPredicted RBP18.46■□□□□ 0.55
PTPRU-208ENST00000493601 TDRD5Q8NAT2 981 aaKnown RBP18.46■□□□□ 0.55
PTPRU-208ENST00000493601 ASIC4Q96FT7 647 aa18.46■□□□□ 0.55
PTPRU-208ENST00000493601 POLR3FQ9H1D9 316 aaPredicted RBP18.46■□□□□ 0.55
PTPRU-208ENST00000493601 DBR1Q9UK59 544 aaKnown RBP18.46■□□□□ 0.55
PTPRU-208ENST00000493601 ZMYM2Q9UBW7 1377 aa18.45■□□□□ 0.54
PTPRU-208ENST00000493601 USO1O60763 962 aaKnown RBP18.45■□□□□ 0.54
PTPRU-208ENST00000493601 SSBP05455 408 aaKnown RBP eCLIP18.45■□□□□ 0.54
PTPRU-208ENST00000493601 URODP06132 367 aa18.45■□□□□ 0.54
PTPRU-208ENST00000493601 WEE2P0C1S8 567 aa18.45■□□□□ 0.54
PTPRU-208ENST00000493601 XRCC6P12956 609 aaKnown RBP eCLIP18.45■□□□□ 0.54
PTPRU-208ENST00000493601 GLRA2P23416 452 aa18.45■□□□□ 0.54
PTPRU-208ENST00000493601 KLRC2P26717 231 aa18.45■□□□□ 0.54
PTPRU-208ENST00000493601 MCM7P33993 719 aa18.45■□□□□ 0.54
PTPRU-208ENST00000493601 AMHR2Q16671 573 aa18.45■□□□□ 0.54
PTPRU-208ENST00000493601 UBALD2Q8IYN6 164 aa18.45■□□□□ 0.54
PTPRU-208ENST00000493601 KREMEN2Q8NCW0 462 aa18.45■□□□□ 0.54
PTPRU-208ENST00000493601 PIGOQ8TEQ8 1089 aa18.45■□□□□ 0.54
PTPRU-208ENST00000493601 GAD1Q99259 594 aa18.45■□□□□ 0.54
PTPRU-208ENST00000493601 SORCS3Q9UPU3 1222 aa18.45■□□□□ 0.54
PTPRU-208ENST00000493601 SSX2IPQ9Y2D8 614 aa18.45■□□□□ 0.54
PTPRU-208ENST00000493601 PRG3Q9Y2Y8 225 aaPredicted RBP18.45■□□□□ 0.54
PTPRU-208ENST00000493601 ZDBF2Q9HCK1 2354 aa18.45■□□□□ 0.54
PTPRU-208ENST00000493601 NR1I2O75469 434 aa18.44■□□□□ 0.54
PTPRU-208ENST00000493601 SOD2P04179 222 aa18.44■□□□□ 0.54
PTPRU-208ENST00000493601 CNPP09543 421 aaKnown RBP18.44■□□□□ 0.54
PTPRU-208ENST00000493601 ARF4P18085 180 aaPredicted RBP18.44■□□□□ 0.54
PTPRU-208ENST00000493601 OR1G1P47890 313 aa18.44■□□□□ 0.54
PTPRU-208ENST00000493601 CLCN4P51793 760 aa18.44■□□□□ 0.54
PTPRU-208ENST00000493601 DSC1Q08554 894 aa18.44■□□□□ 0.54
PTPRU-208ENST00000493601 ST3GAL1Q11201 340 aa18.44■□□□□ 0.54
PTPRU-208ENST00000493601 SLC27A1Q6PCB7 646 aa18.44■□□□□ 0.54
PTPRU-208ENST00000493601 ELMSAN1Q6PJG2 1045 aa18.44■□□□□ 0.54
PTPRU-208ENST00000493601 TMC5Q6UXY8 1006 aa18.44■□□□□ 0.54
PTPRU-208ENST00000493601 ALYREFQ86V81 257 aaKnown RBP18.44■□□□□ 0.54
PTPRU-208ENST00000493601 COLGALT2Q8IYK4 626 aa18.44■□□□□ 0.54
PTPRU-208ENST00000493601 MCPH1Q8NEM0 835 aa18.44■□□□□ 0.54
PTPRU-208ENST00000493601 ZFP42Q96MM3 310 aa18.44■□□□□ 0.54
PTPRU-208ENST00000493601 KLHL5Q96PQ7 755 aa18.44■□□□□ 0.54
PTPRU-208ENST00000493601 HERC2P3Q9BVR0 1158 aa18.44■□□□□ 0.54
PTPRU-208ENST00000493601 TMEM60Q9H2L4 133 aa18.44■□□□□ 0.54
PTPRU-208ENST00000493601 RNF39Q9H2S5 420 aa18.44■□□□□ 0.54
PTPRU-208ENST00000493601 NXF3Q9H4D5 531 aaKnown RBP18.44■□□□□ 0.54
PTPRU-208ENST00000493601 TUFT1Q9NNX1 390 aa18.44■□□□□ 0.54
PTPRU-208ENST00000493601 MARCH5Q9NX47 278 aa18.44■□□□□ 0.54
PTPRU-208ENST00000493601 LIMCH1Q9UPQ0 1083 aa18.44■□□□□ 0.54
PTPRU-208ENST00000493601 USTQ9Y2C2 406 aa18.44■□□□□ 0.54
PTPRU-208ENST00000493601 GIT1Q9Y2X7 761 aa18.44■□□□□ 0.54
PTPRU-208ENST00000493601 HES2Q9Y543 173 aa18.44■□□□□ 0.54
PTPRU-208ENST00000493601 C2orf16Q68DN1 1984 aa18.44■□□□□ 0.54
PTPRU-208ENST00000493601 LRRIQ4A6NIV6 560 aa18.43■□□□□ 0.54
PTPRU-208ENST00000493601 ATP2B1P20020 1258 aa18.43■□□□□ 0.54
PTPRU-208ENST00000493601 MRE11P49959 708 aa18.43■□□□□ 0.54
PTPRU-208ENST00000493601 SCNN1GP51170 649 aa18.43■□□□□ 0.54
PTPRU-208ENST00000493601 PTPN5P54829 565 aa18.43■□□□□ 0.54
PTPRU-208ENST00000493601 ORC2Q13416 577 aaPredicted RBP18.43■□□□□ 0.54
PTPRU-208ENST00000493601 ZDHHC14Q8IZN3 488 aa18.43■□□□□ 0.54
PTPRU-208ENST00000493601 PLCD3Q8N3E9 789 aa18.43■□□□□ 0.54
PTPRU-208ENST00000493601 ERMNQ8TAM6 284 aa18.43■□□□□ 0.54
PTPRU-208ENST00000493601 C8orf76Q96K31 380 aa18.43■□□□□ 0.54
PTPRU-208ENST00000493601 APOL6Q9BWW8 343 aa18.43■□□□□ 0.54
PTPRU-208ENST00000493601 PLXNA3P51805 1871 aa18.43■□□□□ 0.54
PTPRU-208ENST00000493601 C2CD2LO14523 706 aa18.42■□□□□ 0.54
PTPRU-208ENST00000493601 B4GALT5O43286 388 aa18.42■□□□□ 0.54
PTPRU-208ENST00000493601 LILRB3O75022 631 aa18.42■□□□□ 0.54
PTPRU-208ENST00000493601 ADH1AP07327 375 aa18.42■□□□□ 0.54
PTPRU-208ENST00000493601 SPATA31C1P0DKV0 1188 aa18.42■□□□□ 0.54
PTPRU-208ENST00000493601 GLUD2P49448 558 aa18.42■□□□□ 0.54
PTPRU-208ENST00000493601 GUCY1B3Q02153 619 aa18.42■□□□□ 0.54
PTPRU-208ENST00000493601 KANK3Q6NY19 840 aa18.42■□□□□ 0.54
PTPRU-208ENST00000493601 CCDC149Q6ZUS6 474 aa18.42■□□□□ 0.54
PTPRU-208ENST00000493601 GPR149Q86SP6 731 aa18.42■□□□□ 0.54
PTPRU-208ENST00000493601 CATSPER3Q86XQ3 398 aa18.42■□□□□ 0.54
PTPRU-208ENST00000493601 ZBTB8OSQ8IWT0 167 aa18.42■□□□□ 0.54
PTPRU-208ENST00000493601 PRSS33Q8NF86 280 aa18.42■□□□□ 0.54
PTPRU-208ENST00000493601 PRIMPOLQ96LW4 560 aa18.42■□□□□ 0.54
PTPRU-208ENST00000493601 NACC1Q96RE7 527 aa18.42■□□□□ 0.54
PTPRU-208ENST00000493601 RPS6KC1Q96S38 1066 aa18.42■□□□□ 0.54
PTPRU-208ENST00000493601 LLPHQ9BRT6 129 aaKnown RBP18.42■□□□□ 0.54
PTPRU-208ENST00000493601 POLR3CQ9BUI4 534 aaPredicted RBP18.42■□□□□ 0.54
PTPRU-208ENST00000493601 DPP7Q9UHL4 492 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms