RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 SMIM31A0A1B0GVY4 71 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 TBKBP1A7MCY6 615 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 TTC34A8MYJ7 566 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 BUB1O43683 1085 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 ATP6V1B1P15313 513 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 NEK3P51956 506 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 KPNA1P52294 538 aaPredicted RBP7.32□□□□□ -1.24
VPS13B-205ENST00000493587 CYP4A11Q02928 519 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 LRRC36Q1X8D7 754 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 CERKLQ49MI3 558 aaPredicted RBP7.32□□□□□ -1.24
VPS13B-205ENST00000493587 WASHC2DQ5SRD0 308 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 TTC39AQ5SRH9 613 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 CATIPQ7Z7H3 387 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 C1orf131Q8NDD1 294 aaKnown RBP7.32□□□□□ -1.24
VPS13B-205ENST00000493587 DGCR14Q96DF8 476 aaKnown RBP7.32□□□□□ -1.24
VPS13B-205ENST00000493587 CDHR1Q96JP9 859 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 ZNF317Q96PQ6 595 aaPredicted RBP7.32□□□□□ -1.24
VPS13B-205ENST00000493587 TTC1Q99614 292 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 CGREF1Q99674 301 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 DENND2DQ9H6A0 471 aaPredicted RBP7.32□□□□□ -1.24
VPS13B-205ENST00000493587 IFT122Q9HBG6 1241 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 TBC1D23Q9NUY8 699 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 NDUFA13Q9P0J0 144 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 ADD3Q9UEY8 706 aaKnown RBP7.32□□□□□ -1.24
VPS13B-205ENST00000493587 PA2G4Q9UQ80 394 aaKnown RBP7.32□□□□□ -1.24
VPS13B-205ENST00000493587 SUGT1Q9Y2Z0 365 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 COQ6Q9Y2Z9 468 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 TTLL3Q9Y4R7 772 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 POLR2DO15514 142 aaKnown RBP7.32□□□□□ -1.24
VPS13B-205ENST00000493587 TFPTP0C1Z6 253 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 KRT4P19013 534 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 MARK3P27448 753 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 SLC34A1Q06495 639 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 AIMP1Q12904 312 aaKnown RBP7.32□□□□□ -1.24
VPS13B-205ENST00000493587 PLS1Q14651 629 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 LPIN1Q14693 890 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 CRY1Q16526 586 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 DEPDC1Q5TB30 811 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 BRSK2Q8IWQ3 736 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 SMYD4Q8IYR2 804 aaPredicted RBP7.32□□□□□ -1.24
VPS13B-205ENST00000493587 MARCH10Q8NA82 808 aaPredicted RBP7.32□□□□□ -1.24
VPS13B-205ENST00000493587 CALML6Q8TD86 181 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 DIS3LQ8TF46 1054 aaKnown RBP7.32□□□□□ -1.24
VPS13B-205ENST00000493587 PPP1R10Q96QC0 940 aaKnown RBP7.32□□□□□ -1.24
VPS13B-205ENST00000493587 LLPHQ9BRT6 129 aaKnown RBP7.32□□□□□ -1.24
VPS13B-205ENST00000493587 TBC1D10AQ9BXI6 508 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 AZI2Q9H6S1 392 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 TIMMDC1Q9NPL8 285 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 POLR3EQ9NVU0 708 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 TTC7AQ9ULT0 858 aaPredicted RBP7.32□□□□□ -1.24
VPS13B-205ENST00000493587 CTNND2Q9UQB3 1225 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 TRAF3IP3Q9Y228 551 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 ARHGAP10A1A4S6 786 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 GOLGA8CPA6NN73 597 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 ADCY6O43306 1168 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 ATP5HO75947 161 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 CHEK2O96017 543 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 OCRLQ01968 901 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 MED21Q13503 144 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 TTF1Q15361 905 aaPredicted RBP7.31□□□□□ -1.24
VPS13B-205ENST00000493587 KHDC1Q4VXA5 237 aaKnown RBP7.31□□□□□ -1.24
VPS13B-205ENST00000493587 MAP3K21Q5TCX8 1036 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 RESP18Q5W5W9 173 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 LLGL2Q6P1M3 1020 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 PDXDC1Q6P996 788 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 BARGINQ6ZT62 677 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 VASH1Q7L8A9 365 aaPredicted RBP7.31□□□□□ -1.24
VPS13B-205ENST00000493587 MCF2L2Q86YR7 1114 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 GAB3Q8WWW8 586 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 VPS50Q96JG6 964 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 CEP63Q96MT8 703 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 DNAJC17Q9NVM6 304 aaKnown RBP7.31□□□□□ -1.24
VPS13B-205ENST00000493587 CAPN6Q9Y6Q1 641 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 NEDD4P46934 1319 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 TTC26A0AVF1 554 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 TNFRSF10AO00220 468 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 RAD51CO43502 376 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 GM2AP17900 193 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 RASA1P20936 1047 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 TUBA4AP68366 448 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 DSG1Q02413 1049 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 ARL13BQ3SXY8 428 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 COBLL1Q53SF7 1204 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 FOXP4Q8IVH2 680 aaPredicted RBP7.31□□□□□ -1.24
VPS13B-205ENST00000493587 SPERTQ8NA61 448 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 MTFR1LQ9H019 292 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 GDF3Q9NR23 364 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 DDX56Q9NY93 547 aaKnown RBP7.31□□□□□ -1.24
VPS13B-205ENST00000493587 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.31□□□□□ -1.24
VPS13B-205ENST00000493587 SERTAD1Q9UHV2 236 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 ANGPTL2Q9UKU9 493 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.31□□□□□ -1.24
VPS13B-205ENST00000493587 CCDC169A6NNP5 214 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 RNF225M0QZC1 329 aaPredicted RBP7.31□□□□□ -1.24
VPS13B-205ENST00000493587 CNOT3O75175 753 aaKnown RBP7.31□□□□□ -1.24
VPS13B-205ENST00000493587 DCTN3O75935 186 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 SEC24DO94855 1032 aaPredicted RBP7.31□□□□□ -1.24
VPS13B-205ENST00000493587 AFPP02771 609 aaKnown RBP7.31□□□□□ -1.24
VPS13B-205ENST00000493587 ESRRAP11474 423 aaPredicted RBP7.31□□□□□ -1.24
VPS13B-205ENST00000493587 CYP19A1P11511 503 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms