RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 PDZD7Q9H5P4 517 aa14.07□□□□□ -0.16
CLIP2-209ENST00000493166 GDPD2Q9HCC8 539 aa14.07□□□□□ -0.16
CLIP2-209ENST00000493166 USP20Q9Y2K6 914 aa14.07□□□□□ -0.16
CLIP2-209ENST00000493166 RWDD3Q9Y3V2 267 aa14.07□□□□□ -0.16
CLIP2-209ENST00000493166 MRPL42Q9Y6G3 142 aaKnown RBP14.07□□□□□ -0.16
CLIP2-209ENST00000493166 EPOPA6NHQ4 379 aa14.06□□□□□ -0.16
CLIP2-209ENST00000493166 TTLL13PA6NNM8 815 aa14.06□□□□□ -0.16
CLIP2-209ENST00000493166 MEIS3P2A8K0S8 358 aa14.06□□□□□ -0.16
CLIP2-209ENST00000493166 K7ENM7 598 aa14.06□□□□□ -0.16
CLIP2-209ENST00000493166 EDN1P05305 212 aa14.06□□□□□ -0.16
CLIP2-209ENST00000493166 MAPTP10636 758 aaKnown RBP14.06□□□□□ -0.16
CLIP2-209ENST00000493166 ITGA4P13612 1032 aa14.06□□□□□ -0.16
CLIP2-209ENST00000493166 FOSL2P15408 326 aa14.06□□□□□ -0.16
CLIP2-209ENST00000493166 CMA1P23946 247 aa14.06□□□□□ -0.16
CLIP2-209ENST00000493166 NCKAP1LP55160 1127 aa14.06□□□□□ -0.16
CLIP2-209ENST00000493166 TPRNQ4KMQ1 711 aa14.06□□□□□ -0.16
CLIP2-209ENST00000493166 EPC2Q52LR7 807 aa14.06□□□□□ -0.16
CLIP2-209ENST00000493166 ATF7IP2Q5U623 682 aa14.06□□□□□ -0.16
CLIP2-209ENST00000493166 GLB1LQ6UWU2 654 aa14.06□□□□□ -0.16
CLIP2-209ENST00000493166 MRPL10Q7Z7H8 261 aaKnown RBP14.06□□□□□ -0.16
CLIP2-209ENST00000493166 FAM178BQ8IXR5 827 aa14.06□□□□□ -0.16
CLIP2-209ENST00000493166 TMEM192Q8IY95 271 aa14.06□□□□□ -0.16
CLIP2-209ENST00000493166 LRRC43Q8N309 656 aa14.06□□□□□ -0.16
CLIP2-209ENST00000493166 TMEM161BQ8NDZ6 487 aa14.06□□□□□ -0.16
CLIP2-209ENST00000493166 GDPD5Q8WTR4 605 aa14.06□□□□□ -0.16
CLIP2-209ENST00000493166 STAMQ92783 540 aa14.06□□□□□ -0.16
CLIP2-209ENST00000493166 CLP1Q92989 425 aaKnown RBP14.06□□□□□ -0.16
CLIP2-209ENST00000493166 MRPL4Q9BYD3 311 aaKnown RBP14.06□□□□□ -0.16
CLIP2-209ENST00000493166 LRRC27Q9C0I9 530 aa14.06□□□□□ -0.16
CLIP2-209ENST00000493166 MAGEF1Q9HAY2 307 aa14.06□□□□□ -0.16
CLIP2-209ENST00000493166 KCNH3Q9ULD8 1083 aa14.06□□□□□ -0.16
CLIP2-209ENST00000493166 IPPQ9Y573 584 aa14.06□□□□□ -0.16
CLIP2-209ENST00000493166 A0A1B0GVL5 298 aa14.05□□□□□ -0.16
CLIP2-209ENST00000493166 RFXAPO00287 272 aa14.05□□□□□ -0.16
CLIP2-209ENST00000493166 TRAK2O60296 914 aa14.05□□□□□ -0.16
CLIP2-209ENST00000493166 LINC00271P0C7V0 271 aa14.05□□□□□ -0.16
CLIP2-209ENST00000493166 IDEP14735 1019 aa14.05□□□□□ -0.16
CLIP2-209ENST00000493166 PFKFB1P16118 471 aa14.05□□□□□ -0.16
CLIP2-209ENST00000493166 AMPD3Q01432 767 aa14.05□□□□□ -0.16
CLIP2-209ENST00000493166 NT5DC1Q5TFE4 455 aa14.05□□□□□ -0.16
CLIP2-209ENST00000493166 AGMOQ6ZNB7 445 aa14.05□□□□□ -0.16
CLIP2-209ENST00000493166 TAS1R3Q7RTX0 852 aa14.05□□□□□ -0.16
CLIP2-209ENST00000493166 HAUS6Q7Z4H7 955 aa14.05□□□□□ -0.16
CLIP2-209ENST00000493166 APBB1IPQ7Z5R6 666 aaPredicted RBP14.05□□□□□ -0.16
CLIP2-209ENST00000493166 CEP57L1Q8IYX8 460 aa14.05□□□□□ -0.16
CLIP2-209ENST00000493166 SMG8Q8ND04 991 aaKnown RBP14.05□□□□□ -0.16
CLIP2-209ENST00000493166 URGCPQ8TCY9 931 aa14.05□□□□□ -0.16
CLIP2-209ENST00000493166 RSPH1Q8WYR4 309 aa14.05□□□□□ -0.16
CLIP2-209ENST00000493166 DNAJC19Q96DA6 116 aa14.05□□□□□ -0.16
CLIP2-209ENST00000493166 APOL6Q9BWW8 343 aa14.05□□□□□ -0.16
CLIP2-209ENST00000493166 MRPL9Q9BYD2 267 aaKnown RBP14.05□□□□□ -0.16
CLIP2-209ENST00000493166 NXF3Q9H4D5 531 aaKnown RBP14.05□□□□□ -0.16
CLIP2-209ENST00000493166 RSAD1Q9HA92 442 aa14.05□□□□□ -0.16
CLIP2-209ENST00000493166 UBN1Q9NPG3 1134 aa14.05□□□□□ -0.16
CLIP2-209ENST00000493166 AAASQ9NRG9 546 aa14.05□□□□□ -0.16
CLIP2-209ENST00000493166 KBTBD4Q9NVX7 518 aa14.05□□□□□ -0.16
CLIP2-209ENST00000493166 INPP5FQ9Y2H2 1132 aa14.05□□□□□ -0.16
CLIP2-209ENST00000493166 HES2Q9Y543 173 aa14.05□□□□□ -0.16
CLIP2-209ENST00000493166 OFD1O75665 1012 aa14.04□□□□□ -0.16
CLIP2-209ENST00000493166 GAP43P17677 238 aa14.04□□□□□ -0.16
CLIP2-209ENST00000493166 SCP2P22307 547 aa14.04□□□□□ -0.16
CLIP2-209ENST00000493166 IGFBP4P22692 258 aa14.04□□□□□ -0.16
CLIP2-209ENST00000493166 ABCD1P33897 745 aa14.04□□□□□ -0.16
CLIP2-209ENST00000493166 BMPR1AP36894 532 aa14.04□□□□□ -0.16
CLIP2-209ENST00000493166 DCAF4L1Q3SXM0 396 aa14.04□□□□□ -0.16
CLIP2-209ENST00000493166 NOMO2Q5JPE7 1267 aa14.04□□□□□ -0.16
CLIP2-209ENST00000493166 EEF1DP3Q658K8 133 aa14.04□□□□□ -0.16
CLIP2-209ENST00000493166 SFR1Q86XK3 245 aa14.04□□□□□ -0.16
CLIP2-209ENST00000493166 FSIP1Q8NA03 581 aa14.04□□□□□ -0.16
CLIP2-209ENST00000493166 SLC17A8Q8NDX2 589 aa14.04□□□□□ -0.16
CLIP2-209ENST00000493166 MRPS27Q92552 414 aaKnown RBP14.04□□□□□ -0.16
CLIP2-209ENST00000493166 BICD1Q96G01 975 aa14.04□□□□□ -0.16
CLIP2-209ENST00000493166 ACO2Q99798 780 aaKnown RBP14.04□□□□□ -0.16
CLIP2-209ENST00000493166 TARS2Q9BW92 718 aaKnown RBP14.04□□□□□ -0.16
CLIP2-209ENST00000493166 TYW1Q9NV66 732 aaKnown RBP14.04□□□□□ -0.16
CLIP2-209ENST00000493166 CHMP5Q9NZZ3 219 aa14.04□□□□□ -0.16
CLIP2-209ENST00000493166 HCSTQ9UBK5 93 aa14.04□□□□□ -0.16
CLIP2-209ENST00000493166 SEL1LQ9UBV2 794 aa14.04□□□□□ -0.16
CLIP2-209ENST00000493166 TNFSF13BQ9Y275 285 aa14.04□□□□□ -0.16
CLIP2-209ENST00000493166 STXBP5LQ9Y2K9 1186 aa14.04□□□□□ -0.16
CLIP2-209ENST00000493166 A0A1W2PQ27 194 aa14.03□□□□□ -0.16
CLIP2-209ENST00000493166 A0A1W2PQ64 194 aa14.03□□□□□ -0.16
CLIP2-209ENST00000493166 A0A1W2PQD8 194 aa14.03□□□□□ -0.16
CLIP2-209ENST00000493166 GOLGA6L4A6NEF3 574 aa14.03□□□□□ -0.16
CLIP2-209ENST00000493166 C5orf67F2Z3F1 127 aa14.03□□□□□ -0.16
CLIP2-209ENST00000493166 GTPBP6O43824 516 aaPredicted RBP14.03□□□□□ -0.16
CLIP2-209ENST00000493166 RB1P06400 928 aa14.03□□□□□ -0.16
CLIP2-209ENST00000493166 LAG3P18627 525 aa14.03□□□□□ -0.16
CLIP2-209ENST00000493166 NMT1P30419 496 aaKnown RBP14.03□□□□□ -0.16
CLIP2-209ENST00000493166 SYKP43405 635 aa14.03□□□□□ -0.16
CLIP2-209ENST00000493166 ASIC1P78348 528 aa14.03□□□□□ -0.16
CLIP2-209ENST00000493166 RNASELQ05823 741 aaKnown RBP14.03□□□□□ -0.16
CLIP2-209ENST00000493166 GPM6BQ13491 265 aa14.03□□□□□ -0.16
CLIP2-209ENST00000493166 ADGRE1Q14246 886 aa14.03□□□□□ -0.16
CLIP2-209ENST00000493166 ZNF568Q3ZCX4 644 aa14.03□□□□□ -0.16
CLIP2-209ENST00000493166 HERC4Q5GLZ8 1057 aaPredicted RBP14.03□□□□□ -0.16
CLIP2-209ENST00000493166 LRRC55Q6ZSA7 311 aa14.03□□□□□ -0.16
CLIP2-209ENST00000493166 CCDC65Q8IXS2 484 aa14.03□□□□□ -0.16
CLIP2-209ENST00000493166 C11orf84Q9BUA3 381 aaPredicted RBP14.03□□□□□ -0.16
CLIP2-209ENST00000493166 PLVAPQ9BX97 442 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms