RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 RUFY4Q6ZNE9 571 aa8.77□□□□□ -1.01
FDPS-218ENST00000492887 CATSPER4Q7RTX7 472 aa8.77□□□□□ -1.01
FDPS-218ENST00000492887 FRMD5Q7Z6J6 570 aa8.77□□□□□ -1.01
FDPS-218ENST00000492887 CTU1Q7Z7A3 348 aaKnown RBP8.77□□□□□ -1.01
FDPS-218ENST00000492887 USP37Q86T82 979 aa8.77□□□□□ -1.01
FDPS-218ENST00000492887 ZNF410Q86VK4 478 aa8.77□□□□□ -1.01
FDPS-218ENST00000492887 VSTM4Q8IW00 320 aa8.77□□□□□ -1.01
FDPS-218ENST00000492887 GPD1LQ8N335 351 aa8.77□□□□□ -1.01
FDPS-218ENST00000492887 ARRDC4Q8NCT1 418 aa8.77□□□□□ -1.01
FDPS-218ENST00000492887 KLHDC9Q8NEP7 349 aa8.77□□□□□ -1.01
FDPS-218ENST00000492887 FAM212AQ96EL1 285 aa8.77□□□□□ -1.01
FDPS-218ENST00000492887 PDLIM2Q96JY6 352 aa8.77□□□□□ -1.01
FDPS-218ENST00000492887 OSMRQ99650 979 aa8.77□□□□□ -1.01
FDPS-218ENST00000492887 ADPGKQ9BRR6 497 aa8.77□□□□□ -1.01
FDPS-218ENST00000492887 FAM213AQ9BRX8 229 aa8.77□□□□□ -1.01
FDPS-218ENST00000492887 MKNK1Q9BUB5 465 aa8.77□□□□□ -1.01
FDPS-218ENST00000492887 STRA6Q9BX79 667 aa8.77□□□□□ -1.01
FDPS-218ENST00000492887 TSPYL2Q9H2G4 693 aaPredicted RBP8.77□□□□□ -1.01
FDPS-218ENST00000492887 RTN4Q9NQC3 1192 aaKnown RBP8.77□□□□□ -1.01
FDPS-218ENST00000492887 GTF2IRD1Q9UHL9 959 aa8.77□□□□□ -1.01
FDPS-218ENST00000492887 AGO2Q9UKV8 859 aaKnown RBP8.77□□□□□ -1.01
FDPS-218ENST00000492887 USP20Q9Y2K6 914 aa8.77□□□□□ -1.01
FDPS-218ENST00000492887 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.77□□□□□ -1.011e-9■□□□□ 8.1
FDPS-218ENST00000492887 A0A0U1RQG5 324 aaPredicted RBP8.76□□□□□ -1.01
FDPS-218ENST00000492887 KIAA0391O15091 583 aaKnown RBP8.76□□□□□ -1.01
FDPS-218ENST00000492887 CLDN3O15551 220 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 AKAP3O75969 853 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 LDHAP00338 332 aaKnown RBP8.76□□□□□ -1.01
FDPS-218ENST00000492887 TRIM49P0CI25 452 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 TRIM49CP0CI26 452 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 HSPA8P11142 646 aaKnown RBP8.76□□□□□ -1.01
FDPS-218ENST00000492887 CCL5P13501 91 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 TRIM21P19474 475 aaKnown RBP8.76□□□□□ -1.01
FDPS-218ENST00000492887 GARTP22102 1010 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 FGFR4P22455 802 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 SFPQP23246 707 aaKnown RBP eCLIP8.76□□□□□ -1.01
FDPS-218ENST00000492887 CTCFP49711 727 aaPredicted RBP8.76□□□□□ -1.01
FDPS-218ENST00000492887 LBX1P52954 281 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 ACLYP53396 1101 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 GSDMDP57764 484 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 PTENP60484 403 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 CDC42EP1Q00587 391 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 MYL7Q01449 175 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 MBTD1Q05BQ5 628 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 PPP2R3AQ06190 1150 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 KCNH2Q12809 1159 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 BFSP1Q12934 665 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 ITGA7Q13683 1181 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 TRIM14Q14142 442 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 MYBPC2Q14324 1141 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 NR1I3Q14994 352 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 MTFR1Q15390 333 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 PTGISQ16647 500 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 MARCH8Q5T0T0 291 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 ATF7IP2Q5U623 682 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 SPECC1LQ69YQ0 1117 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 GDF6Q6KF10 455 aaPredicted RBP8.76□□□□□ -1.01
FDPS-218ENST00000492887 TAF2Q6P1X5 1199 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 INTS8Q75QN2 995 aaKnown RBP8.76□□□□□ -1.01
FDPS-218ENST00000492887 TAS1R3Q7RTX0 852 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 CCDC186Q7Z3E2 898 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 APBB1IPQ7Z5R6 666 aaPredicted RBP8.76□□□□□ -1.01
FDPS-218ENST00000492887 SRGAP1Q7Z6B7 1085 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 IRF2BP1Q8IU81 584 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 SLC9A9Q8IVB4 645 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 C12orf56Q8IXR9 622 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 ZC3H3Q8IXZ2 948 aaKnown RBP8.76□□□□□ -1.01
FDPS-218ENST00000492887 LINC01465Q8N7H1 131 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 CCDC150Q8NCX0 1101 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 NEK11Q8NG66 645 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 CPLX3Q8WVH0 158 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 CPB2Q96IY4 423 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 DEFB118Q96PH6 123 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 FNBP1Q96RU3 617 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 NTPCRQ9BSD7 190 aaKnown RBP8.76□□□□□ -1.01
FDPS-218ENST00000492887 LSM14BQ9BX40 385 aaKnown RBP8.76□□□□□ -1.01
FDPS-218ENST00000492887 TRIM6Q9C030 488 aaPredicted RBP8.76□□□□□ -1.01
FDPS-218ENST00000492887 NDST4Q9H3R1 872 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 IMPACTQ9P2X3 320 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 TRPV2Q9Y5S1 764 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 CDY2AQ9Y6F7 541 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 MICAL3Q7RTP6 2002 aa8.76□□□□□ -1.01
FDPS-218ENST00000492887 A0A1W2PQ45 241 aaPredicted RBP8.75□□□□□ -1.01
FDPS-218ENST00000492887 A0A1W2PQY0 241 aa8.75□□□□□ -1.01
FDPS-218ENST00000492887 MBLAC1A4D2B0 266 aaPredicted RBP8.75□□□□□ -1.01
FDPS-218ENST00000492887 ZNF233A6NK53 670 aa8.75□□□□□ -1.01
FDPS-218ENST00000492887 ACKR2O00590 384 aa8.75□□□□□ -1.01
FDPS-218ENST00000492887 B4GALT5O43286 388 aa8.75□□□□□ -1.01
FDPS-218ENST00000492887 EXTL3O43909 919 aa8.75□□□□□ -1.01
FDPS-218ENST00000492887 STX10O60499 249 aa8.75□□□□□ -1.01
FDPS-218ENST00000492887 N4BP1O75113 896 aaKnown RBP8.75□□□□□ -1.01
FDPS-218ENST00000492887 CSDE1O75534 798 aaKnown RBP8.75□□□□□ -1.01
FDPS-218ENST00000492887 PIGRP01833 764 aa8.75□□□□□ -1.01
FDPS-218ENST00000492887 DLATP10515 647 aaKnown RBP8.75□□□□□ -1.01
FDPS-218ENST00000492887 IBSPP21815 317 aaPredicted RBP8.75□□□□□ -1.01
FDPS-218ENST00000492887 ACOT2P49753 483 aa8.75□□□□□ -1.01
FDPS-218ENST00000492887 VAMP7P51809 220 aa8.75□□□□□ -1.01
FDPS-218ENST00000492887 OSTNP61366 133 aa8.75□□□□□ -1.01
FDPS-218ENST00000492887 MRPS6P82932 125 aaKnown RBP8.75□□□□□ -1.01
FDPS-218ENST00000492887 CETN1Q12798 172 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms