RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 CNGA1P29973 690 aa13.89□□□□□ -0.19
PRAME-213ENST00000492657 JAK3P52333 1124 aa13.89□□□□□ -0.19
PRAME-213ENST00000492657 ZNF211Q13398 564 aaPredicted RBP13.89□□□□□ -0.19
PRAME-213ENST00000492657 PRPF4BQ13523 1007 aaKnown RBP13.89□□□□□ -0.19
PRAME-213ENST00000492657 ALCAMQ13740 583 aa13.89□□□□□ -0.19
PRAME-213ENST00000492657 TMEM132BQ14DG7 1078 aa13.89□□□□□ -0.19
PRAME-213ENST00000492657 SNRNP35Q16560 246 aaKnown RBP13.89□□□□□ -0.19
PRAME-213ENST00000492657 TTMPQ5BVD1 217 aa13.89□□□□□ -0.19
PRAME-213ENST00000492657 ANGEL2Q5VTE6 544 aaKnown RBP13.89□□□□□ -0.19
PRAME-213ENST00000492657 AADACL2Q6P093 401 aa13.89□□□□□ -0.19
PRAME-213ENST00000492657 SCYL3Q8IZE3 742 aa13.89□□□□□ -0.19
PRAME-213ENST00000492657 ZNF280CQ8ND82 737 aa13.89□□□□□ -0.19
PRAME-213ENST00000492657 PPM1EQ8WY54 764 aa13.89□□□□□ -0.19
PRAME-213ENST00000492657 CELF4Q9BZC1 486 aaKnown RBP13.89□□□□□ -0.19
PRAME-213ENST00000492657 MAP3K20Q9NYL2 800 aaKnown RBP13.89□□□□□ -0.19
PRAME-213ENST00000492657 AMACRQ9UHK6 382 aa13.89□□□□□ -0.19
PRAME-213ENST00000492657 PCDHA10Q9Y5I2 948 aa13.89□□□□□ -0.19
PRAME-213ENST00000492657 PFASO15067 1338 aa13.89□□□□□ -0.19
PRAME-213ENST00000492657 ADGRA3Q8IWK6 1321 aa13.89□□□□□ -0.19
PRAME-213ENST00000492657 DDX3YO15523 660 aaKnown RBP13.89□□□□□ -0.19
PRAME-213ENST00000492657 CYP26A1O43174 497 aa13.89□□□□□ -0.19
PRAME-213ENST00000492657 KRT14P02533 472 aa13.89□□□□□ -0.19
PRAME-213ENST00000492657 SLC39A4Q6P5W5 647 aa13.89□□□□□ -0.19
PRAME-213ENST00000492657 DLK2Q6UY11 383 aa13.89□□□□□ -0.19
PRAME-213ENST00000492657 TADA2BQ86TJ2 420 aa13.89□□□□□ -0.19
PRAME-213ENST00000492657 PPM1KQ8N3J5 372 aa13.89□□□□□ -0.19
PRAME-213ENST00000492657 PIK3R5Q8WYR1 880 aa13.89□□□□□ -0.19
PRAME-213ENST00000492657 RUFY1Q96T51 708 aa13.89□□□□□ -0.19
PRAME-213ENST00000492657 SH3GL2Q99962 352 aa13.89□□□□□ -0.19
PRAME-213ENST00000492657 ANKEF1Q9NU02 776 aa13.89□□□□□ -0.19
PRAME-213ENST00000492657 TMEM110-MUSTN1A8MSY1 372 aa13.88□□□□□ -0.19
PRAME-213ENST00000492657 ATMINO43313 823 aaPredicted RBP13.88□□□□□ -0.19
PRAME-213ENST00000492657 HSF2BPO75031 334 aa13.88□□□□□ -0.19
PRAME-213ENST00000492657 STBD1O95210 358 aa13.88□□□□□ -0.19
PRAME-213ENST00000492657 FGGP02679 453 aa13.88□□□□□ -0.19
PRAME-213ENST00000492657 CHRNB2P17787 502 aa13.88□□□□□ -0.19
PRAME-213ENST00000492657 CCND2P30279 289 aa13.88□□□□□ -0.19
PRAME-213ENST00000492657 CETN1Q12798 172 aa13.88□□□□□ -0.19
PRAME-213ENST00000492657 HLTFQ14527 1009 aaKnown RBP eCLIP13.88□□□□□ -0.193e-8■■■■□ 23.8
PRAME-213ENST00000492657 KCTD16Q68DU8 428 aa13.88□□□□□ -0.19
PRAME-213ENST00000492657 NOP9Q86U38 636 aaKnown RBP13.88□□□□□ -0.19
PRAME-213ENST00000492657 CPNE8Q86YQ8 564 aa13.88□□□□□ -0.19
PRAME-213ENST00000492657 SYCE1Q8N0S2 351 aa13.88□□□□□ -0.19
PRAME-213ENST00000492657 NEUROG2Q9H2A3 272 aa13.88□□□□□ -0.19
PRAME-213ENST00000492657 ST6GALNAC4Q9H4F1 302 aa13.88□□□□□ -0.19
PRAME-213ENST00000492657 KMT5AQ9NQR1 393 aa13.88□□□□□ -0.19
PRAME-213ENST00000492657 PICK1Q9NRD5 415 aa13.88□□□□□ -0.19
PRAME-213ENST00000492657 TMOD4Q9NZQ9 345 aa13.88□□□□□ -0.19
PRAME-213ENST00000492657 ZNF214Q9UL59 606 aaPredicted RBP13.88□□□□□ -0.19
PRAME-213ENST00000492657 RLFQ13129 1914 aa13.88□□□□□ -0.19
PRAME-213ENST00000492657 ANKRD62A6NC57 917 aa13.88□□□□□ -0.19
PRAME-213ENST00000492657 CCDC172P0C7W6 258 aa13.88□□□□□ -0.19
PRAME-213ENST00000492657 KCNA2P16389 499 aa13.88□□□□□ -0.19
PRAME-213ENST00000492657 RPS12P25398 132 aaKnown RBP13.88□□□□□ -0.19
PRAME-213ENST00000492657 SFNP31947 248 aa13.88□□□□□ -0.19
PRAME-213ENST00000492657 FSTL1Q12841 308 aa13.88□□□□□ -0.19
PRAME-213ENST00000492657 SLC47A2Q86VL8 602 aa13.88□□□□□ -0.19
PRAME-213ENST00000492657 IQCKQ8N0W5 287 aa13.88□□□□□ -0.19
PRAME-213ENST00000492657 RASGEF1CQ8N431 466 aa13.88□□□□□ -0.19
PRAME-213ENST00000492657 SH2D3CQ8N5H7 860 aa13.88□□□□□ -0.19
PRAME-213ENST00000492657 ALG3Q92685 438 aa13.88□□□□□ -0.19
PRAME-213ENST00000492657 ZNF233A6NK53 670 aa13.87□□□□□ -0.19
PRAME-213ENST00000492657 ECHS1P30084 290 aa13.87□□□□□ -0.19
PRAME-213ENST00000492657 DSG3P32926 999 aa13.87□□□□□ -0.19
PRAME-213ENST00000492657 IRAK1P51617 712 aa13.87□□□□□ -0.19
PRAME-213ENST00000492657 MNAT1P51948 309 aa13.87□□□□□ -0.19
PRAME-213ENST00000492657 ALS2CLQ60I27 953 aa13.87□□□□□ -0.19
PRAME-213ENST00000492657 CCDC60Q8IWA6 550 aaPredicted RBP13.87□□□□□ -0.19
PRAME-213ENST00000492657 DHX38Q92620 1227 aaKnown RBP13.87□□□□□ -0.19
PRAME-213ENST00000492657 ZNF541Q9H0D2 1346 aa13.87□□□□□ -0.19
PRAME-213ENST00000492657 PARP14Q460N5 1801 aa13.87□□□□□ -0.19
PRAME-213ENST00000492657 TTI1O43156 1089 aa13.87□□□□□ -0.19
PRAME-213ENST00000492657 DMP1Q13316 513 aaPredicted RBP13.87□□□□□ -0.19
PRAME-213ENST00000492657 CFAP58Q5T655 872 aa13.87□□□□□ -0.19
PRAME-213ENST00000492657 TRPM4Q8TD43 1214 aa13.87□□□□□ -0.19
PRAME-213ENST00000492657 TAS1R2Q8TE23 839 aa13.87□□□□□ -0.19
PRAME-213ENST00000492657 PARD3BQ8TEW8 1205 aa13.87□□□□□ -0.19
PRAME-213ENST00000492657 XPNPEP1Q9NQW7 623 aa13.87□□□□□ -0.19
PRAME-213ENST00000492657 CTTNBP2NLQ9P2B4 639 aa13.87□□□□□ -0.19
PRAME-213ENST00000492657 ALG6Q9Y672 507 aa13.87□□□□□ -0.19
PRAME-213ENST00000492657 ATP8B3O60423 1300 aa13.87□□□□□ -0.19
PRAME-213ENST00000492657 DLATP10515 647 aaKnown RBP13.86□□□□□ -0.19
PRAME-213ENST00000492657 FLT3P36888 993 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 MARCKSL1P49006 195 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 SMTNP53814 917 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 NNTQ13423 1086 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 MAP4K3Q8IVH8 894 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 KRT35Q92764 455 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 TATDN2Q93075 761 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 PI4K2AQ9BTU6 479 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 CAPS2Q9BXY5 557 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 ISCUQ9H1K1 167 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 TAF1DQ9H5J8 278 aaPredicted RBP13.86□□□□□ -0.19
PRAME-213ENST00000492657 A1CFQ9NQ94 594 aaKnown RBP13.86□□□□□ -0.19
PRAME-213ENST00000492657 SEPT9Q9UHD8 586 aaPredicted RBP13.86□□□□□ -0.19
PRAME-213ENST00000492657 ZNF112Q9UJU3 913 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 DAPK3O43293 454 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 OPA1O60313 960 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 MMEP08473 750 aa13.86□□□□□ -0.19
PRAME-213ENST00000492657 SP2Q02086 613 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms