RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 NKRFO15226 690 aaKnown RBP eCLIP3.68□□□□□ -1.82
SNX13-209ENST00000492626 NDUFS2O75306 463 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 CYP4F8P98187 520 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 TMEM62Q0P6H9 643 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 NFIAQ12857 509 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 MBNL2Q5VZF2 373 aaKnown RBP3.68□□□□□ -1.82
SNX13-209ENST00000492626 MBLAC2Q68D91 279 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 SIRT2Q8IXJ6 389 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 UHMK1Q8TAS1 419 aaKnown RBP3.68□□□□□ -1.82
SNX13-209ENST00000492626 PLCB1Q9NQ66 1216 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 PIM2Q9P1W9 311 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 IMPACTQ9P2X3 320 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 CEP83Q9Y592 693 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 DAPK1P53355 1430 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 ANKRD36BQ8N2N9 1353 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 CGNL1Q0VF96 1302 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 FAM227AF5H4B4 570 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 TGM5O43548 720 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 BUB1BO60566 1050 aaPredicted RBP3.68□□□□□ -1.82
SNX13-209ENST00000492626 CLEC2LP0C7M8 214 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 AGXTP21549 392 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 GJA9P57773 515 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 MIGA2Q7L4E1 593 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 FAM214BQ7L5A3 538 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 SRLQ86TD4 932 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 NLRP10Q86W26 655 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 MYRIPQ8NFW9 859 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 SHKBP1Q8TBC3 707 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.68□□□□□ -1.82
SNX13-209ENST00000492626 MVB12AQ96EY5 273 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 PEX11GQ96HA9 241 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 X6R8D5 127 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 MAP3K19Q56UN5 1328 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 TTC21AQ8NDW8 1320 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 APAF1O14727 1248 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 SLC27A2O14975 620 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 SETSIPP0DME0 302 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 PTX3P26022 381 aaPredicted RBP3.68□□□□□ -1.82
SNX13-209ENST00000492626 CDK17Q00537 523 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 ADCY2Q08462 1091 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 GAB4Q2WGN9 574 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 MILR1Q7Z6M3 343 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 SPICE1Q8N0Z3 855 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 NLGN2Q8NFZ4 835 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 PARD3BQ8TEW8 1205 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 JADE3Q92613 823 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 HDAC10Q969S8 669 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 EAF2Q96CJ1 260 aaPredicted RBP3.68□□□□□ -1.82
SNX13-209ENST00000492626 CCDC138Q96M89 665 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 POFUT1Q9H488 388 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 ZMAT4Q9H898 229 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 CARS2Q9HA77 564 aaKnown RBP3.68□□□□□ -1.82
SNX13-209ENST00000492626 DPP7Q9UHL4 492 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 ANAPC4Q9UJX5 808 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 ADAMTS8Q9UP79 889 aa3.68□□□□□ -1.82
SNX13-209ENST00000492626 MAP2P11137 1827 aaKnown RBP3.68□□□□□ -1.82
SNX13-209ENST00000492626 hCG_1642624A0A1W2PR95 340 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 HSP90AA1P07900 732 aaKnown RBP3.67□□□□□ -1.82
SNX13-209ENST00000492626 ZBTB48P10074 688 aaPredicted RBP3.67□□□□□ -1.82
SNX13-209ENST00000492626 MRPS9P82933 396 aaKnown RBP3.67□□□□□ -1.82
SNX13-209ENST00000492626 ODF1Q14990 250 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 CXorf67Q86X51 503 aaPredicted RBP3.67□□□□□ -1.82
SNX13-209ENST00000492626 ALPK1Q96QP1 1244 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 STRBPQ96SI9 672 aaKnown RBP3.67□□□□□ -1.82
SNX13-209ENST00000492626 IFT122Q9HBG6 1241 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 TAGLN3Q9UI15 199 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 FBXL7Q9UJT9 491 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 PHTF1Q9UMS5 762 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 SNX13Q9Y5W8 968 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 USP2O75604 605 aaPredicted RBP3.67□□□□□ -1.82
SNX13-209ENST00000492626 ZBED1O96006 694 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 IGLV1-40P01703 118 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 AMY2AP04746 511 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 AMY2BP19961 511 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 PAX3P23760 479 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 IL12RB1P42701 662 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 HTRA3P83110 453 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 POU5F1BQ06416 359 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 MAP3K12Q12852 859 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 NOGQ13253 232 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 ARHGEF6Q15052 776 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 PGS1Q32NB8 556 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 GJC2Q5T442 439 aaPredicted RBP3.67□□□□□ -1.82
SNX13-209ENST00000492626 SLFN12LQ6IEE8 588 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 NOSTRINQ8IVI9 506 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 PLD6Q8N2A8 252 aaKnown RBP3.67□□□□□ -1.82
SNX13-209ENST00000492626 JMJD8Q96S16 334 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 HERPUD2Q9BSE4 406 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 ANLNQ9NQW6 1124 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 PRAMEF22A3QJZ6 481 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 PRPF6O94906 941 aaKnown RBP3.67□□□□□ -1.82
SNX13-209ENST00000492626 NTRK1P04629 796 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 PRKCAP17252 672 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 RHCEP18577 417 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 ITGB8P26012 769 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 GPR3P46089 330 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 SLC6A11P48066 632 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 HERVK_113P62684 666 aa3.67□□□□□ -1.82
SNX13-209ENST00000492626 INSM1Q01101 510 aaPredicted RBP3.67□□□□□ -1.82
SNX13-209ENST00000492626 RHDQ02161 417 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms