RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 TUBGCP5Q96RT8 1024 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 MPHOSPH9Q99550 1183 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 BTBD2Q9BX70 525 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 ANO3Q9BYT9 981 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 PITHD1Q9GZP4 211 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 OR10A5Q9H207 317 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 CCM2LQ9NUG4 571 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 PACSIN3Q9UKS6 424 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 NOC2LQ9Y3T9 749 aaKnown RBP3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 PCDHGA9Q9Y5G4 932 aaKnown RBP3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 PCDHGA8Q9Y5G5 932 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 PCDHGA7Q9Y5G6 932 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 PCDHGA6Q9Y5G7 932 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 PCDHGA3Q9Y5H0 932 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 PCDHGA2Q9Y5H1 932 aa3.96□□□□□ -1.78
HMGB1P30-201ENST00000492455 RBP3P10745 1247 aa3.95□□□□□ -1.78
HMGB1P30-201ENST00000492455 NEK2P51955 445 aa3.95□□□□□ -1.78
HMGB1P30-201ENST00000492455 CD83Q01151 205 aa3.95□□□□□ -1.78
HMGB1P30-201ENST00000492455 ROM1Q03395 351 aa3.95□□□□□ -1.78
HMGB1P30-201ENST00000492455 ADCY2Q08462 1091 aa3.95□□□□□ -1.78
HMGB1P30-201ENST00000492455 FAPQ12884 760 aa3.95□□□□□ -1.78
HMGB1P30-201ENST00000492455 ODF1Q14990 250 aa3.95□□□□□ -1.78
HMGB1P30-201ENST00000492455 PCBP2Q15366 365 aaKnown RBP eCLIP3.95□□□□□ -1.78
HMGB1P30-201ENST00000492455 FSCN1Q16658 493 aaKnown RBP3.95□□□□□ -1.78
HMGB1P30-201ENST00000492455 ZNF362Q5T0B9 420 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P30-201ENST00000492455 PRAMEF9Q5VWM5 478 aa3.95□□□□□ -1.78
HMGB1P30-201ENST00000492455 KIAA1841Q6NSI8 718 aa3.95□□□□□ -1.78
HMGB1P30-201ENST00000492455 ESPNLQ6ZVH7 1005 aa3.95□□□□□ -1.78
HMGB1P30-201ENST00000492455 ADGRG3Q86Y34 549 aa3.95□□□□□ -1.78
HMGB1P30-201ENST00000492455 RTKN2Q8IZC4 609 aa3.95□□□□□ -1.78
HMGB1P30-201ENST00000492455 GPR150Q8NGU9 434 aa3.95□□□□□ -1.78
HMGB1P30-201ENST00000492455 WDR48Q8TAF3 677 aa3.95□□□□□ -1.78
HMGB1P30-201ENST00000492455 EAF2Q96CJ1 260 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P30-201ENST00000492455 FUBP3Q96I24 572 aaKnown RBP eCLIP3.95□□□□□ -1.78
HMGB1P30-201ENST00000492455 KIAA1683Q9H0B3 1180 aa3.95□□□□□ -1.78
HMGB1P30-201ENST00000492455 DENND2AQ9ULE3 1009 aa3.95□□□□□ -1.78
HMGB1P30-201ENST00000492455 GOLGA8AA7E2F4 631 aa3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 GOLGA8BA8MQT2 603 aa3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 PARNO95453 639 aaKnown RBP3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 S100BP04271 92 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 LPLP06858 475 aa3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 ENPP1P22413 925 aa3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 MTNR1BP49286 362 aa3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 RGS19P49795 217 aa3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 ANTXR2P58335 489 aa3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 SRSF2Q01130 221 aaKnown RBP3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 MBNL2Q5VZF2 373 aaKnown RBP3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 TMEM200BQ69YZ2 307 aa3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 CCDC62Q6P9F0 684 aa3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 OTOP2Q7RTS6 562 aa3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 SHCBP1Q8NEM2 672 aa3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 JDP2Q8WYK2 163 aa3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 CFHR4Q92496 578 aa3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 E2F7Q96AV8 911 aa3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 FAXDC2Q96IV6 333 aa3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 SOX7Q9BT81 388 aa3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 RTFDC1Q9BY42 306 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 SLC13A1Q9BZW2 595 aa3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 OR10A2Q9H208 303 aa3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 MTG2Q9H4K7 406 aa3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 ZNF277Q9NRM2 450 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 G3BP2Q9UN86 482 aaKnown RBP3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 EID1Q9Y6B2 187 aa3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 NUMBLQ9Y6R0 609 aa3.94□□□□□ -1.78
HMGB1P30-201ENST00000492455 A0A0A6YYJ9 748 aa3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 SHTN1A0MZ66 631 aa3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 SLC26A4O43511 780 aa3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 AKAP10O43572 662 aa3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 OPHN1O60890 802 aa3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 ABLIM3O94929 683 aa3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 ZRANB2O95218 330 aaKnown RBP eCLIP3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 APOL3O95236 402 aa3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 MYBL2P10244 700 aa3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 APEX1P27695 318 aaKnown RBP3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 RAB27AP51159 221 aa3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 KRT85P78386 507 aa3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 PTPAQ15257 358 aa3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 LRRC41Q15345 812 aa3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 TBR1Q16650 682 aa3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 CXXC5Q7LFL8 322 aaKnown RBP3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 GSPT2Q8IYD1 628 aaKnown RBP3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 GPR135Q8IZ08 494 aa3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 OR5AN1Q8NGI8 311 aa3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 TSPEARQ8WU66 669 aa3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 CHMP4CQ96CF2 233 aa3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 HOOK2Q96ED9 719 aa3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 ACAP3Q96P50 834 aa3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 FDXACB1Q9BRP7 624 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 QRSL1Q9H0R6 528 aaKnown RBP3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 KCTD10Q9H3F6 313 aa3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 GPRC5BQ9NZH0 403 aa3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 FAM184BQ9ULE4 1060 aa3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 EDARQ9UNE0 448 aa3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 WASHC2AQ641Q2 1341 aa3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 MYPNQ86TC9 1320 aa3.93□□□□□ -1.78
HMGB1P30-201ENST00000492455 INO80B-WBP1J3KQ70 363 aa3.92□□□□□ -1.78
HMGB1P30-201ENST00000492455 PPFIA4O75335 1185 aa3.92□□□□□ -1.78
HMGB1P30-201ENST00000492455 SEC24DO94855 1032 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P30-201ENST00000492455 PCDH8O95206 1070 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms