RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 V9GY48 417 aaPredicted RBP13.23□□□□□ -0.29
CACNA1C-228ENST00000492150 TENM4Q6N022 2769 aa13.23□□□□□ -0.29
CACNA1C-228ENST00000492150 CCDC195A0A1B0GUA6 201 aa13.22□□□□□ -0.29
CACNA1C-228ENST00000492150 IPO5O00410 1097 aaKnown RBP13.22□□□□□ -0.29
CACNA1C-228ENST00000492150 GIPC1O14908 333 aa13.22□□□□□ -0.29
CACNA1C-228ENST00000492150 ADAMTS3O15072 1205 aa13.22□□□□□ -0.29
CACNA1C-228ENST00000492150 CYP3A4P08684 503 aa13.22□□□□□ -0.29
CACNA1C-228ENST00000492150 ALDH7A1P49419 539 aaKnown RBP13.22□□□□□ -0.29
CACNA1C-228ENST00000492150 NECTIN1Q15223 517 aa13.22□□□□□ -0.29
CACNA1C-228ENST00000492150 COL28A1Q2UY09 1125 aa13.22□□□□□ -0.29
CACNA1C-228ENST00000492150 JAKMIP3Q5VZ66 844 aa13.22□□□□□ -0.29
CACNA1C-228ENST00000492150 ELMSAN1Q6PJG2 1045 aa13.22□□□□□ -0.29
CACNA1C-228ENST00000492150 TRMT1LQ7Z2T5 733 aaKnown RBP13.22□□□□□ -0.29
CACNA1C-228ENST00000492150 ZNF598Q86UK7 904 aaKnown RBP13.22□□□□□ -0.29
CACNA1C-228ENST00000492150 CKAP2LQ8IYA6 745 aa13.22□□□□□ -0.29
CACNA1C-228ENST00000492150 RBM28Q9NW13 759 aaKnown RBP13.22□□□□□ -0.29
CACNA1C-228ENST00000492150 STK39Q9UEW8 545 aa13.22□□□□□ -0.29
CACNA1C-228ENST00000492150 LAMA1P25391 3075 aa13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 NT5C1B-RDH14C9J2C7 533 aa13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 hCG_1984214I3L0E3 225 aa13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 INPPL1O15357 1258 aa13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 CEACAM1P13688 526 aa13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 ZSCAN20P17040 1043 aaPredicted RBP13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 CD72P21854 359 aa13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 EIF4BP23588 611 aaKnown RBP13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 METAP2P50579 478 aaKnown RBP eCLIP13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 BCAR1P56945 870 aa13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 ZNF746Q6NUN9 644 aaPredicted RBP13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 EFCAB12Q6NXP0 572 aa13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 C19orf48Q6RUI8 117 aa13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 ZNF852Q6ZMS4 543 aa13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 SYNE3Q6ZMZ3 975 aa13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 LRRC71Q8N4P6 559 aa13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 ZNF713Q8N859 430 aaPredicted RBP13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 RNF169Q8NCN4 708 aa13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 HELQQ8TDG4 1101 aa13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 RSPH1Q8WYR4 309 aa13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 FGF14Q92915 247 aa13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 ZNF668Q96K58 619 aaPredicted RBP13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 HNRNPABQ99729 332 aaKnown RBP13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 ZNF577Q9BSK1 485 aa13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 RPP25Q9BUL9 199 aaKnown RBP13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 MRPL9Q9BYD2 267 aaKnown RBP13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 GLT8D2Q9H1C3 349 aa13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 MAN1C1Q9NR34 630 aa13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 TBC1D22BQ9NU19 505 aa13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 BRPF3Q9ULD4 1205 aa13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 AKT3Q9Y243 479 aa13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 PCDHA10Q9Y5I2 948 aa13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 F5P12259 2224 aa13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 SDK1Q7Z5N4 2213 aa13.21□□□□□ -0.29
CACNA1C-228ENST00000492150 MYO18BQ8IUG5 2567 aa13.21□□□□□ -0.3
CACNA1C-228ENST00000492150 USP9XQ93008 2570 aaPredicted RBP13.21□□□□□ -0.3
CACNA1C-228ENST00000492150 MYH9P35579 1960 aaKnown RBP13.2□□□□□ -0.3
CACNA1C-228ENST00000492150 A0A0U1RQF3 1178 aa13.2□□□□□ -0.3
CACNA1C-228ENST00000492150 MAGEB2O15479 319 aa13.2□□□□□ -0.3
CACNA1C-228ENST00000492150 PSAPP07602 524 aa13.2□□□□□ -0.3
CACNA1C-228ENST00000492150 FGFR4P22455 802 aa13.2□□□□□ -0.3
CACNA1C-228ENST00000492150 KLRC2P26717 231 aa13.2□□□□□ -0.3
CACNA1C-228ENST00000492150 EXOSC10Q01780 885 aaKnown RBP13.2□□□□□ -0.3
CACNA1C-228ENST00000492150 RTN1Q16799 776 aa13.2□□□□□ -0.3
CACNA1C-228ENST00000492150 PLA2G2CQ5R387 149 aa13.2□□□□□ -0.3
CACNA1C-228ENST00000492150 RNF43Q68DV7 783 aa13.2□□□□□ -0.3
CACNA1C-228ENST00000492150 TPRG1Q6ZUI0 275 aa13.2□□□□□ -0.3
CACNA1C-228ENST00000492150 MTSS1LQ765P7 747 aa13.2□□□□□ -0.3
CACNA1C-228ENST00000492150 SMAP1Q8IYB5 467 aaPredicted RBP13.2□□□□□ -0.3
CACNA1C-228ENST00000492150 ZNF687Q8N1G0 1237 aa13.2□□□□□ -0.3
CACNA1C-228ENST00000492150 SMG7Q92540 1137 aaKnown RBP13.2□□□□□ -0.3
CACNA1C-228ENST00000492150 MAP7D2Q96T17 732 aa13.2□□□□□ -0.3
CACNA1C-228ENST00000492150 GABBR1Q9UBS5 961 aa13.2□□□□□ -0.3
CACNA1C-228ENST00000492150 CEP131Q9UPN4 1083 aa13.2□□□□□ -0.3
CACNA1C-228ENST00000492150 SPTA1P02549 2419 aa13.19□□□□□ -0.3
CACNA1C-228ENST00000492150 ZNF862O60290 1169 aa13.19□□□□□ -0.3
CACNA1C-228ENST00000492150 EPN2O95208 641 aa13.19□□□□□ -0.3
CACNA1C-228ENST00000492150 CNPP09543 421 aaKnown RBP13.19□□□□□ -0.3
CACNA1C-228ENST00000492150 PLA2G2AP14555 144 aa13.19□□□□□ -0.3
CACNA1C-228ENST00000492150 DARSP14868 501 aaKnown RBP13.19□□□□□ -0.3
CACNA1C-228ENST00000492150 CSRP1P21291 193 aaKnown RBP13.19□□□□□ -0.3
CACNA1C-228ENST00000492150 CDC27P30260 824 aa13.19□□□□□ -0.3
CACNA1C-228ENST00000492150 GPC3P51654 580 aa13.19□□□□□ -0.3
CACNA1C-228ENST00000492150 PARM1Q6UWI2 310 aa13.19□□□□□ -0.3
CACNA1C-228ENST00000492150 GET4Q7L5D6 327 aaPredicted RBP13.19□□□□□ -0.3
CACNA1C-228ENST00000492150 LONP2Q86WA8 852 aa13.19□□□□□ -0.3
CACNA1C-228ENST00000492150 TMEM173Q86WV6 379 aaPredicted RBP13.19□□□□□ -0.3
CACNA1C-228ENST00000492150 ZNF710Q8N1W2 664 aa13.19□□□□□ -0.3
CACNA1C-228ENST00000492150 PIK3R5Q8WYR1 880 aa13.19□□□□□ -0.3
CACNA1C-228ENST00000492150 ZNF707Q96C28 371 aaPredicted RBP13.19□□□□□ -0.3
CACNA1C-228ENST00000492150 IGSF21Q96ID5 467 aa13.19□□□□□ -0.3
CACNA1C-228ENST00000492150 FAM167AQ96KS9 214 aa13.19□□□□□ -0.3
CACNA1C-228ENST00000492150 TCEANC2Q96MN5 208 aa13.19□□□□□ -0.3
CACNA1C-228ENST00000492150 ESYT1Q9BSJ8 1104 aa13.19□□□□□ -0.3
CACNA1C-228ENST00000492150 ARRDC1-AS1Q9H2J1 176 aa13.19□□□□□ -0.3
CACNA1C-228ENST00000492150 PCDHGA5Q9Y5G8 931 aa13.19□□□□□ -0.3
CACNA1C-228ENST00000492150 ACACAQ13085 2346 aa13.18□□□□□ -0.3
CACNA1C-228ENST00000492150 FAM221BA6H8Z2 402 aa13.18□□□□□ -0.3
CACNA1C-228ENST00000492150 SHISA7A6NL88 538 aa13.18□□□□□ -0.3
CACNA1C-228ENST00000492150 TK2O00142 265 aa13.18□□□□□ -0.3
CACNA1C-228ENST00000492150 ZBTB43O43298 467 aa13.18□□□□□ -0.3
CACNA1C-228ENST00000492150 LILRB3O75022 631 aa13.18□□□□□ -0.3
CACNA1C-228ENST00000492150 CSDE1O75534 798 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms