RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 GLB1LQ6UWU2 654 aa12.24□□□□□ -0.45
TMEM39A-211ENST00000491685 VPS52Q8N1B4 723 aa12.24□□□□□ -0.45
TMEM39A-211ENST00000491685 C12orf76Q8N812 135 aaPredicted RBP12.24□□□□□ -0.45
TMEM39A-211ENST00000491685 ERMNQ8TAM6 284 aa12.24□□□□□ -0.45
TMEM39A-211ENST00000491685 ASAP3Q8TDY4 903 aa12.24□□□□□ -0.45
TMEM39A-211ENST00000491685 PSPC1Q8WXF1 523 aaKnown RBP12.24□□□□□ -0.45
TMEM39A-211ENST00000491685 TMEM169Q96HH4 297 aa12.24□□□□□ -0.45
TMEM39A-211ENST00000491685 IGSF21Q96ID5 467 aa12.24□□□□□ -0.45
TMEM39A-211ENST00000491685 PPME1Q9Y570 386 aa12.24□□□□□ -0.45
TMEM39A-211ENST00000491685 ZDBF2Q9HCK1 2354 aa12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 TMEM221A6NGB7 291 aa12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 M0R296 226 aa12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 TSPAN1O60635 241 aa12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 SLITRK3O94933 977 aa12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 F13A1P00488 732 aa12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 SKIP12755 728 aa12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 PRPHP41219 470 aa12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 ALDH7A1P49419 539 aaKnown RBP12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 TOB1P50616 345 aaPredicted RBP12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 RAB27AP51159 221 aa12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 RESTQ13127 1097 aa12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 SF3A1Q15459 793 aaKnown RBP12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 IER5LQ5T953 404 aa12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 FOXD4L5Q5VV16 416 aaPredicted RBP12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 TRIM67Q6ZTA4 783 aa12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 MRPL10Q7Z7H8 261 aaKnown RBP12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 TPH2Q8IWU9 490 aa12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 RNF149Q8NC42 400 aa12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 SMG8Q8ND04 991 aaKnown RBP12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 FOXD4L4Q8WXT5 416 aaPredicted RBP12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 CASP10Q92851 521 aa12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 MTMR9Q96QG7 549 aa12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 MTRQ99707 1265 aa12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 EIF2AK1Q9BQI3 630 aaKnown RBP12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 EIF2AQ9BY44 585 aaKnown RBP12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 SMOC2Q9H3U7 446 aa12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 POMKQ9H5K3 350 aa12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 PCDHB6Q9Y5E3 794 aa12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 MYO10Q9HD67 2058 aa12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 MYO15AQ9UKN7 3530 aa12.23□□□□□ -0.45
TMEM39A-211ENST00000491685 POTEMA6NI47 508 aa12.22□□□□□ -0.45
TMEM39A-211ENST00000491685 F8W810 466 aa12.22□□□□□ -0.45
TMEM39A-211ENST00000491685 CXCL14O95715 111 aa12.22□□□□□ -0.45
TMEM39A-211ENST00000491685 POMCP01189 267 aa12.22□□□□□ -0.45
TMEM39A-211ENST00000491685 CTSAP10619 480 aa12.22□□□□□ -0.45
TMEM39A-211ENST00000491685 TCF15Q12870 199 aa12.22□□□□□ -0.45
TMEM39A-211ENST00000491685 CAPSQ13938 189 aa12.22□□□□□ -0.45
TMEM39A-211ENST00000491685 PTPN14Q15678 1187 aa12.22□□□□□ -0.45
TMEM39A-211ENST00000491685 RARS2Q5T160 578 aaKnown RBP12.22□□□□□ -0.45
TMEM39A-211ENST00000491685 OTUD6AQ7L8S5 288 aa12.22□□□□□ -0.45
TMEM39A-211ENST00000491685 SRGAP1Q7Z6B7 1085 aa12.22□□□□□ -0.45
TMEM39A-211ENST00000491685 DDX53Q86TM3 631 aaKnown RBP12.22□□□□□ -0.45
TMEM39A-211ENST00000491685 SLC22A17Q8WUG5 538 aa12.22□□□□□ -0.45
TMEM39A-211ENST00000491685 ASIC4Q96FT7 647 aa12.22□□□□□ -0.45
TMEM39A-211ENST00000491685 CPB2Q96IY4 423 aa12.22□□□□□ -0.45
TMEM39A-211ENST00000491685 HSD17B14Q9BPX1 270 aa12.22□□□□□ -0.45
TMEM39A-211ENST00000491685 TMEM60Q9H2L4 133 aa12.22□□□□□ -0.45
TMEM39A-211ENST00000491685 RNF39Q9H2S5 420 aa12.22□□□□□ -0.45
TMEM39A-211ENST00000491685 ZSWIM4Q9H7M6 989 aa12.22□□□□□ -0.45
TMEM39A-211ENST00000491685 RSAD1Q9HA92 442 aa12.22□□□□□ -0.45
TMEM39A-211ENST00000491685 MARCH5Q9NX47 278 aa12.22□□□□□ -0.45
TMEM39A-211ENST00000491685 HES2Q9Y543 173 aa12.22□□□□□ -0.45
TMEM39A-211ENST00000491685 SPTBN4Q9H254 2564 aa12.22□□□□□ -0.45
TMEM39A-211ENST00000491685 C2CD4DB7Z1M9 353 aa12.21□□□□□ -0.45
TMEM39A-211ENST00000491685 B4GALT5O43286 388 aa12.21□□□□□ -0.45
TMEM39A-211ENST00000491685 GFRA3O60609 400 aa12.21□□□□□ -0.45
TMEM39A-211ENST00000491685 BRD1O95696 1058 aa12.21□□□□□ -0.45
TMEM39A-211ENST00000491685 SSBP05455 408 aaKnown RBP eCLIP12.21□□□□□ -0.45
TMEM39A-211ENST00000491685 HOXB8P17481 243 aaPredicted RBP12.21□□□□□ -0.45
TMEM39A-211ENST00000491685 NCLP19338 710 aaKnown RBP12.21□□□□□ -0.45
TMEM39A-211ENST00000491685 PTENP60484 403 aa12.21□□□□□ -0.45
TMEM39A-211ENST00000491685 RNASELQ05823 741 aaKnown RBP12.21□□□□□ -0.45
TMEM39A-211ENST00000491685 MBTD1Q05BQ5 628 aa12.21□□□□□ -0.45
TMEM39A-211ENST00000491685 STK38Q15208 465 aa12.21□□□□□ -0.45
TMEM39A-211ENST00000491685 AMHR2Q16671 573 aa12.21□□□□□ -0.45
TMEM39A-211ENST00000491685 PTPN21Q16825 1174 aa12.21□□□□□ -0.45
TMEM39A-211ENST00000491685 CDR2LQ86X02 465 aaPredicted RBP12.21□□□□□ -0.45
TMEM39A-211ENST00000491685 SUGP1Q8IWZ8 645 aaKnown RBP12.21□□□□□ -0.45
TMEM39A-211ENST00000491685 TCP11Q8WWU5 503 aa12.21□□□□□ -0.45
TMEM39A-211ENST00000491685 PBXIP1Q96AQ6 731 aa12.21□□□□□ -0.45
TMEM39A-211ENST00000491685 PGBD4Q96DM1 585 aa12.21□□□□□ -0.45
TMEM39A-211ENST00000491685 ADAM7Q9H2U9 754 aa12.21□□□□□ -0.45
TMEM39A-211ENST00000491685 MIOSQ9NXC5 875 aa12.21□□□□□ -0.45
TMEM39A-211ENST00000491685 STK39Q9UEW8 545 aa12.21□□□□□ -0.45
TMEM39A-211ENST00000491685 LRWD1Q9UFC0 647 aa12.21□□□□□ -0.45
TMEM39A-211ENST00000491685 IPPQ9Y573 584 aa12.21□□□□□ -0.45
TMEM39A-211ENST00000491685 MTCL1Q9Y4B5 1905 aaKnown RBP12.21□□□□□ -0.46
TMEM39A-211ENST00000491685 GAS2O43903 313 aaKnown RBP12.2□□□□□ -0.46
TMEM39A-211ENST00000491685 LYPLA2O95372 231 aa12.2□□□□□ -0.46
TMEM39A-211ENST00000491685 PDGFBP01127 241 aaPredicted RBP12.2□□□□□ -0.46
TMEM39A-211ENST00000491685 XRCC6P12956 609 aaKnown RBP eCLIP12.2□□□□□ -0.46
TMEM39A-211ENST00000491685 GLRA2P23416 452 aa12.2□□□□□ -0.46
TMEM39A-211ENST00000491685 ARL2P36404 184 aa12.2□□□□□ -0.46
TMEM39A-211ENST00000491685 MLH1P40692 756 aa12.2□□□□□ -0.46
TMEM39A-211ENST00000491685 RARRES1P49788 294 aa12.2□□□□□ -0.46
TMEM39A-211ENST00000491685 FXR2P51116 673 aaKnown RBP eCLIP12.2□□□□□ -0.46
TMEM39A-211ENST00000491685 VCPP55072 806 aaKnown RBP12.2□□□□□ -0.46
TMEM39A-211ENST00000491685 ATP2C1P98194 919 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms