RNA–Protein interactions for RNA: ENST00000491680.6

LCLAT1-211, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,610 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-211ENST00000491680 DOCK5Q9H7D0 1870 aa12.52□□□□□ -0.4
LCLAT1-211ENST00000491680 SSU72P8A0A1W2PR75 194 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 FRMD3A2A2Y4 597 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 PES1O00541 588 aaKnown RBP12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 LYPLA2O95372 231 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 GNA14O95837 355 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 ABL1P00519 1130 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 RAG1P15918 1043 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 UBA1P22314 1058 aaKnown RBP12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 SFNP31947 248 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 STK4Q13043 487 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 UGCGQ16739 394 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 DGKDQ16760 1214 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 FAM47CQ5HY64 1035 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 CCNI2Q6ZMN8 369 aaPredicted RBP12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 NOA1Q8NC60 698 aaKnown RBP12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 COG1Q8WTW3 980 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 HPS3Q969F9 1004 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 NACC1Q96RE7 527 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 GDF15Q99988 308 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 RUSC1Q9BVN2 902 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 UBE2OQ9C0C9 1292 aaKnown RBP12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 BHMT2Q9H2M3 363 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 JPH1Q9HDC5 661 aaPredicted RBP12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 LUC7LQ9NQ29 371 aaKnown RBP12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 CUL9Q8IWT3 2517 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 QARSP47897 775 aaKnown RBP12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 CDK7P50613 346 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 FAAP100Q0VG06 881 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 GIT2Q14161 759 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 NEDD9Q14511 834 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 CELF3Q5SZQ8 465 aaKnown RBP12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 KIAA0895Q8NCT3 520 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 EMID1Q96A84 441 aaPredicted RBP12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 SPATA33Q96N06 139 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 ALS2CR12Q96Q35 445 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 TSG101Q99816 390 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 NDST4Q9H3R1 872 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 AGPAT5Q9NUQ2 364 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 VPS18Q9P253 973 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 SNX12Q9UMY4 172 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 SIK3Q9Y2K2 1263 aa12.51□□□□□ -0.41
LCLAT1-211ENST00000491680 TRIM43BA6NCK2 446 aa12.5□□□□□ -0.41
LCLAT1-211ENST00000491680 NOP56O00567 594 aaKnown RBP12.5□□□□□ -0.41
LCLAT1-211ENST00000491680 STBD1O95210 358 aa12.5□□□□□ -0.41
LCLAT1-211ENST00000491680 ATP1A1P05023 1023 aaKnown RBP12.5□□□□□ -0.41
LCLAT1-211ENST00000491680 TNFRSF8P28908 595 aa12.5□□□□□ -0.41
LCLAT1-211ENST00000491680 BMP8BP34820 402 aa12.5□□□□□ -0.41
LCLAT1-211ENST00000491680 LMAN1P49257 510 aa12.5□□□□□ -0.41
LCLAT1-211ENST00000491680 ACTR2P61160 394 aa12.5□□□□□ -0.41
LCLAT1-211ENST00000491680 COASYQ13057 564 aa12.5□□□□□ -0.41
LCLAT1-211ENST00000491680 RINT1Q6NUQ1 792 aa12.5□□□□□ -0.41
LCLAT1-211ENST00000491680 ABHD15Q6UXT9 468 aa12.5□□□□□ -0.41
LCLAT1-211ENST00000491680 C1orf186Q6ZWK4 172 aa12.5□□□□□ -0.41
LCLAT1-211ENST00000491680 FAM126BQ8IXS8 530 aa12.5□□□□□ -0.41
LCLAT1-211ENST00000491680 SLC43A3Q8NBI5 491 aa12.5□□□□□ -0.41
LCLAT1-211ENST00000491680 PPTC7Q8NI37 304 aa12.5□□□□□ -0.41
LCLAT1-211ENST00000491680 BADQ92934 168 aa12.5□□□□□ -0.41
LCLAT1-211ENST00000491680 TRIM43Q96BQ3 446 aaPredicted RBP12.5□□□□□ -0.41
LCLAT1-211ENST00000491680 PCMTD1Q96MG8 357 aaPredicted RBP12.5□□□□□ -0.41
LCLAT1-211ENST00000491680 CEP63Q96MT8 703 aa12.5□□□□□ -0.41
LCLAT1-211ENST00000491680 MMS19Q96T76 1030 aa12.5□□□□□ -0.41
LCLAT1-211ENST00000491680 BMP2KQ9NSY1 1161 aaPredicted RBP12.5□□□□□ -0.41
LCLAT1-211ENST00000491680 SLC9A2Q9UBY0 812 aa12.5□□□□□ -0.41
LCLAT1-211ENST00000491680 PCDHA2Q9Y5H9 948 aa12.5□□□□□ -0.41
LCLAT1-211ENST00000491680 PCDHA10Q9Y5I2 948 aa12.5□□□□□ -0.41
LCLAT1-211ENST00000491680 RBAK-RBAKDNI3L0D1 243 aa12.49□□□□□ -0.41
LCLAT1-211ENST00000491680 KIAA0355O15063 1070 aa12.49□□□□□ -0.41
LCLAT1-211ENST00000491680 IDEP14735 1019 aa12.49□□□□□ -0.41
LCLAT1-211ENST00000491680 PSMC5P62195 406 aa12.49□□□□□ -0.41
LCLAT1-211ENST00000491680 NBPF20Q3BBV1 942 aa12.49□□□□□ -0.41
LCLAT1-211ENST00000491680 CYFIP1Q7L576 1253 aa12.49□□□□□ -0.41
LCLAT1-211ENST00000491680 C4orf19Q8IY42 314 aa12.49□□□□□ -0.41
LCLAT1-211ENST00000491680 REEP2Q9BRK0 252 aa12.49□□□□□ -0.41
LCLAT1-211ENST00000491680 KATNAL1Q9BW62 490 aa12.49□□□□□ -0.41
LCLAT1-211ENST00000491680 SEMA6BQ9H3T3 888 aa12.49□□□□□ -0.41
LCLAT1-211ENST00000491680 PANK4Q9NVE7 773 aa12.49□□□□□ -0.41
LCLAT1-211ENST00000491680 DBR1Q9UK59 544 aaKnown RBP12.49□□□□□ -0.41
LCLAT1-211ENST00000491680 SAMM50Q9Y512 469 aa12.49□□□□□ -0.41
LCLAT1-211ENST00000491680 PCDHA13Q9Y5I0 950 aa12.49□□□□□ -0.41
LCLAT1-211ENST00000491680 SCN10AQ9Y5Y9 1956 aa12.49□□□□□ -0.41
LCLAT1-211ENST00000491680 GRIN2DO15399 1336 aa12.49□□□□□ -0.41
LCLAT1-211ENST00000491680 ZNF862O60290 1169 aa12.48□□□□□ -0.41
LCLAT1-211ENST00000491680 ATG7O95352 703 aa12.48□□□□□ -0.41
LCLAT1-211ENST00000491680 MARSP56192 900 aaKnown RBP12.48□□□□□ -0.41
LCLAT1-211ENST00000491680 FKBP3Q00688 224 aaKnown RBP12.48□□□□□ -0.41
LCLAT1-211ENST00000491680 SP4Q02446 784 aa12.48□□□□□ -0.41
LCLAT1-211ENST00000491680 RAD51AP2Q09MP3 1159 aa12.48□□□□□ -0.41
LCLAT1-211ENST00000491680 NNTQ13423 1086 aa12.48□□□□□ -0.41
LCLAT1-211ENST00000491680 HSDL1Q3SXM5 330 aa12.48□□□□□ -0.41
LCLAT1-211ENST00000491680 ALS2CLQ60I27 953 aa12.48□□□□□ -0.41
LCLAT1-211ENST00000491680 GLIS3Q8NEA6 775 aa12.48□□□□□ -0.41
LCLAT1-211ENST00000491680 NEK11Q8NG66 645 aa12.48□□□□□ -0.41
LCLAT1-211ENST00000491680 CAGE1Q8TC20 777 aa12.48□□□□□ -0.41
LCLAT1-211ENST00000491680 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.48□□□□□ -0.41
LCLAT1-211ENST00000491680 CRACR2AQ9BSW2 395 aa12.48□□□□□ -0.41
LCLAT1-211ENST00000491680 FGFBP2Q9BYJ0 223 aa12.48□□□□□ -0.41
LCLAT1-211ENST00000491680 IFIH1Q9BYX4 1025 aaKnown RBP12.48□□□□□ -0.41
LCLAT1-211ENST00000491680 PPP1R12CQ9BZL4 782 aa12.48□□□□□ -0.41
LCLAT1-211ENST00000491680 LACRTQ9GZZ8 138 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms