RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 V9GY48 417 aaPredicted RBP12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 SMG1Q96Q15 3661 aaKnown RBP12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 USP9XQ93008 2570 aaPredicted RBP12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 DOCK8Q8NF50 2099 aa12.52□□□□□ -0.4
CLCNKA-206ENST00000491433 ESYT2A0FGR8 921 aa12.52□□□□□ -0.41
CLCNKA-206ENST00000491433 LAMTOR5O43504 91 aa12.52□□□□□ -0.41
CLCNKA-206ENST00000491433 N4BP1O75113 896 aaKnown RBP12.52□□□□□ -0.41
CLCNKA-206ENST00000491433 PAPLNO95428 1278 aa12.52□□□□□ -0.41
CLCNKA-206ENST00000491433 LAMP2P13473 410 aa12.52□□□□□ -0.41
CLCNKA-206ENST00000491433 GNA11P29992 359 aa12.52□□□□□ -0.41
CLCNKA-206ENST00000491433 STARD6P59095 220 aa12.52□□□□□ -0.41
CLCNKA-206ENST00000491433 RTN1Q16799 776 aa12.52□□□□□ -0.41
CLCNKA-206ENST00000491433 PRR16Q569H4 304 aa12.52□□□□□ -0.41
CLCNKA-206ENST00000491433 XKR3Q5GH77 459 aa12.52□□□□□ -0.41
CLCNKA-206ENST00000491433 APOA5Q6Q788 366 aa12.52□□□□□ -0.41
CLCNKA-206ENST00000491433 RSPO2Q6UXX9 243 aaPredicted RBP12.52□□□□□ -0.41
CLCNKA-206ENST00000491433 RAB11FIP4Q86YS3 637 aa12.52□□□□□ -0.41
CLCNKA-206ENST00000491433 EXOC8Q8IYI6 725 aa12.52□□□□□ -0.41
CLCNKA-206ENST00000491433 GPR65Q8IYL9 337 aa12.52□□□□□ -0.41
CLCNKA-206ENST00000491433 REXO1Q8N1G1 1221 aaKnown RBP12.52□□□□□ -0.41
CLCNKA-206ENST00000491433 CNNM3Q8NE01 707 aa12.52□□□□□ -0.41
CLCNKA-206ENST00000491433 RDM1Q8NG50 284 aa12.52□□□□□ -0.41
CLCNKA-206ENST00000491433 BICD2Q8TD16 824 aa12.52□□□□□ -0.41
CLCNKA-206ENST00000491433 RIT2Q99578 217 aa12.52□□□□□ -0.41
CLCNKA-206ENST00000491433 OSBPL6Q9BZF3 934 aa12.52□□□□□ -0.41
CLCNKA-206ENST00000491433 RSAD1Q9HA92 442 aa12.52□□□□□ -0.41
CLCNKA-206ENST00000491433 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.52□□□□□ -0.41
CLCNKA-206ENST00000491433 A0A087WZ62 844 aa12.51□□□□□ -0.41
CLCNKA-206ENST00000491433 NRP1O14786 923 aa12.51□□□□□ -0.41
CLCNKA-206ENST00000491433 ZBTB43O43298 467 aa12.51□□□□□ -0.41
CLCNKA-206ENST00000491433 ZNF862O60290 1169 aa12.51□□□□□ -0.41
CLCNKA-206ENST00000491433 CIITAP33076 1130 aa12.51□□□□□ -0.41
CLCNKA-206ENST00000491433 GLUD2P49448 558 aa12.51□□□□□ -0.41
CLCNKA-206ENST00000491433 RCAN1P53805 252 aa12.51□□□□□ -0.41
CLCNKA-206ENST00000491433 CREMQ03060 361 aa12.51□□□□□ -0.41
CLCNKA-206ENST00000491433 PRKCQQ04759 706 aa12.51□□□□□ -0.41
CLCNKA-206ENST00000491433 SPEM2Q0P670 501 aa12.51□□□□□ -0.41
CLCNKA-206ENST00000491433 TARBP2Q15633 366 aaKnown RBP12.51□□□□□ -0.41
CLCNKA-206ENST00000491433 ZNF280BQ86YH2 543 aa12.51□□□□□ -0.41
CLCNKA-206ENST00000491433 MYADMQ96S97 322 aa12.51□□□□□ -0.41
CLCNKA-206ENST00000491433 FDXACB1Q9BRP7 624 aaPredicted RBP12.51□□□□□ -0.41
CLCNKA-206ENST00000491433 VN1R3Q9BXE9 311 aa12.51□□□□□ -0.41
CLCNKA-206ENST00000491433 TEKT3Q9BXF9 490 aa12.51□□□□□ -0.41
CLCNKA-206ENST00000491433 NIFKQ9BYG3 293 aaKnown RBP12.51□□□□□ -0.41
CLCNKA-206ENST00000491433 ZMYND12Q9H0C1 365 aa12.51□□□□□ -0.41
CLCNKA-206ENST00000491433 RXFP1Q9HBX9 757 aa12.51□□□□□ -0.41
CLCNKA-206ENST00000491433 SEPT9Q9UHD8 586 aaPredicted RBP12.51□□□□□ -0.41
CLCNKA-206ENST00000491433 PCDHB2Q9Y5E7 798 aa12.51□□□□□ -0.41
CLCNKA-206ENST00000491433 IGKV6-21A0A0C4DH24 114 aa12.5□□□□□ -0.41
CLCNKA-206ENST00000491433 CCDC196A0A1B0GTZ2 297 aa12.5□□□□□ -0.41
CLCNKA-206ENST00000491433 KANSL1LA0AUZ9 987 aa12.5□□□□□ -0.41
CLCNKA-206ENST00000491433 ANHXE9PGG2 379 aa12.5□□□□□ -0.41
CLCNKA-206ENST00000491433 C2CD2LO14523 706 aa12.5□□□□□ -0.41
CLCNKA-206ENST00000491433 NCAM2O15394 837 aa12.5□□□□□ -0.41
CLCNKA-206ENST00000491433 TEX28O15482 410 aa12.5□□□□□ -0.41
CLCNKA-206ENST00000491433 GAS7O60861 476 aa12.5□□□□□ -0.41
CLCNKA-206ENST00000491433 LRP3O75074 770 aa12.5□□□□□ -0.41
CLCNKA-206ENST00000491433 CSDE1O75534 798 aaKnown RBP12.5□□□□□ -0.41
CLCNKA-206ENST00000491433 DDHD2O94830 711 aa12.5□□□□□ -0.41
CLCNKA-206ENST00000491433 PFKPQ01813 784 aa12.5□□□□□ -0.41
CLCNKA-206ENST00000491433 FUT2Q10981 343 aa12.5□□□□□ -0.41
CLCNKA-206ENST00000491433 LONRF3Q496Y0 759 aa12.5□□□□□ -0.41
CLCNKA-206ENST00000491433 MTERF2Q49AM1 385 aa12.5□□□□□ -0.41
CLCNKA-206ENST00000491433 RNF20Q5VTR2 975 aa12.5□□□□□ -0.41
CLCNKA-206ENST00000491433 MTSS1LQ765P7 747 aa12.5□□□□□ -0.41
CLCNKA-206ENST00000491433 MRPL10Q7Z7H8 261 aaKnown RBP12.5□□□□□ -0.41
CLCNKA-206ENST00000491433 RHPN2Q8IUC4 686 aa12.5□□□□□ -0.41
CLCNKA-206ENST00000491433 ZCCHC14Q8WYQ9 949 aaKnown RBP12.5□□□□□ -0.41
CLCNKA-206ENST00000491433 SUCLA2Q9P2R7 463 aaPredicted RBP12.5□□□□□ -0.41
CLCNKA-206ENST00000491433 RAB23Q9ULC3 237 aa12.5□□□□□ -0.41
CLCNKA-206ENST00000491433 CACNA1IQ9P0X4 2223 aa12.5□□□□□ -0.41
CLCNKA-206ENST00000491433 ITPR1Q14643 2758 aa12.5□□□□□ -0.41
CLCNKA-206ENST00000491433 PATJQ8NI35 1801 aa12.49□□□□□ -0.41
CLCNKA-206ENST00000491433 GOLGA8AA7E2F4 631 aa12.49□□□□□ -0.41
CLCNKA-206ENST00000491433 GOLGA8BA8MQT2 603 aa12.49□□□□□ -0.41
CLCNKA-206ENST00000491433 SLC27A2O14975 620 aa12.49□□□□□ -0.41
CLCNKA-206ENST00000491433 GAS2O43903 313 aaKnown RBP12.49□□□□□ -0.41
CLCNKA-206ENST00000491433 FOXD2O60548 495 aaPredicted RBP12.49□□□□□ -0.41
CLCNKA-206ENST00000491433 DSG1Q02413 1049 aa12.49□□□□□ -0.41
CLCNKA-206ENST00000491433 HTR4Q13639 388 aa12.49□□□□□ -0.41
CLCNKA-206ENST00000491433 PFKFB3Q16875 520 aaPredicted RBP12.49□□□□□ -0.41
CLCNKA-206ENST00000491433 AGMOQ6ZNB7 445 aa12.49□□□□□ -0.41
CLCNKA-206ENST00000491433 GET4Q7L5D6 327 aaPredicted RBP12.49□□□□□ -0.41
CLCNKA-206ENST00000491433 MIER3Q7Z3K6 550 aa12.49□□□□□ -0.41
CLCNKA-206ENST00000491433 SRGAP1Q7Z6B7 1085 aa12.49□□□□□ -0.41
CLCNKA-206ENST00000491433 MAML2Q8IZL2 1156 aaPredicted RBP12.49□□□□□ -0.41
CLCNKA-206ENST00000491433 FEZF2Q8TBJ5 459 aa12.49□□□□□ -0.41
CLCNKA-206ENST00000491433 NELL2Q99435 816 aa12.49□□□□□ -0.41
CLCNKA-206ENST00000491433 LRRC2Q9BYS8 371 aa12.49□□□□□ -0.41
CLCNKA-206ENST00000491433 PRKD2Q9BZL6 878 aa12.49□□□□□ -0.41
CLCNKA-206ENST00000491433 NT5C3AQ9H0P0 336 aa12.49□□□□□ -0.41
CLCNKA-206ENST00000491433 AGPAT5Q9NUQ2 364 aa12.49□□□□□ -0.41
CLCNKA-206ENST00000491433 SPATA6Q9NWH7 488 aaPredicted RBP12.49□□□□□ -0.41
CLCNKA-206ENST00000491433 ZSCAN32Q9NX65 697 aa12.49□□□□□ -0.41
CLCNKA-206ENST00000491433 FNIP2Q9P278 1114 aa12.49□□□□□ -0.41
CLCNKA-206ENST00000491433 NUMBLQ9Y6R0 609 aa12.49□□□□□ -0.41
CLCNKA-206ENST00000491433 LOC400499M0QZD8 3231 aa12.49□□□□□ -0.41
CLCNKA-206ENST00000491433 MYH15Q9Y2K3 1946 aa12.49□□□□□ -0.41
CLCNKA-206ENST00000491433 COL4A3Q01955 1670 aa12.48□□□□□ -0.41
CLCNKA-206ENST00000491433 POTEMA6NI47 508 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms