RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 RFC2P35250 354 aa20.39■□□□□ 0.85
MCF2L-230ENST00000491028 PMS1P54277 932 aaKnown RBP20.39■□□□□ 0.85
MCF2L-230ENST00000491028 MYBPC2Q14324 1141 aa20.39■□□□□ 0.85
MCF2L-230ENST00000491028 MBTPS1Q14703 1052 aa20.39■□□□□ 0.85
MCF2L-230ENST00000491028 ANKRD40Q6AI12 368 aa20.39■□□□□ 0.85
MCF2L-230ENST00000491028 SLC39A4Q6P5W5 647 aa20.39■□□□□ 0.85
MCF2L-230ENST00000491028 NOTUMQ6P988 496 aa20.39■□□□□ 0.85
MCF2L-230ENST00000491028 SLC9A9Q8IVB4 645 aa20.39■□□□□ 0.85
MCF2L-230ENST00000491028 ENOX1Q8TC92 643 aaKnown RBP20.39■□□□□ 0.85
MCF2L-230ENST00000491028 FAM200AQ8TCP9 573 aa20.39■□□□□ 0.85
MCF2L-230ENST00000491028 AGO3Q9H9G7 860 aaKnown RBP20.39■□□□□ 0.85
MCF2L-230ENST00000491028 PRDM5Q9NQX1 630 aaPredicted RBP20.39■□□□□ 0.85
MCF2L-230ENST00000491028 PADI3Q9ULW8 664 aa20.39■□□□□ 0.85
MCF2L-230ENST00000491028 ST3GAL5Q9UNP4 418 aa20.39■□□□□ 0.85
MCF2L-230ENST00000491028 TRIM43BA6NCK2 446 aa20.38■□□□□ 0.85
MCF2L-230ENST00000491028 TRIM49BA6NDI0 452 aa20.38■□□□□ 0.85
MCF2L-230ENST00000491028 TTLL13PA6NNM8 815 aa20.38■□□□□ 0.85
MCF2L-230ENST00000491028 ANKRD63C9JTQ0 380 aa20.38■□□□□ 0.85
MCF2L-230ENST00000491028 IKBKBO14920 756 aa20.38■□□□□ 0.85
MCF2L-230ENST00000491028 KIAA0391O15091 583 aaKnown RBP20.38■□□□□ 0.85
MCF2L-230ENST00000491028 RAG1P15918 1043 aa20.38■□□□□ 0.85
MCF2L-230ENST00000491028 RPL13P26373 211 aaKnown RBP20.38■□□□□ 0.85
MCF2L-230ENST00000491028 CD52P31358 61 aa20.38■□□□□ 0.85
MCF2L-230ENST00000491028 CYP2C18P33260 490 aa20.38■□□□□ 0.85
MCF2L-230ENST00000491028 STX17P56962 302 aa20.38■□□□□ 0.85
MCF2L-230ENST00000491028 MYL5Q02045 173 aa20.38■□□□□ 0.85
MCF2L-230ENST00000491028 ARMCX5Q6P1M9 558 aa20.38■□□□□ 0.85
MCF2L-230ENST00000491028 MPZL3Q6UWV2 235 aa20.38■□□□□ 0.85
MCF2L-230ENST00000491028 APBB1IPQ7Z5R6 666 aaPredicted RBP20.38■□□□□ 0.85
MCF2L-230ENST00000491028 TRIM43Q96BQ3 446 aaPredicted RBP20.38■□□□□ 0.85
MCF2L-230ENST00000491028 IKZF4Q9H2S9 585 aa20.38■□□□□ 0.85
MCF2L-230ENST00000491028 PDZD7Q9H5P4 517 aa20.38■□□□□ 0.85
MCF2L-230ENST00000491028 CHST12Q9NRB3 414 aa20.38■□□□□ 0.85
MCF2L-230ENST00000491028 PRKAG2Q9UGJ0 569 aa20.38■□□□□ 0.85
MCF2L-230ENST00000491028 PIN4Q9Y237 131 aaKnown RBP20.38■□□□□ 0.85
MCF2L-230ENST00000491028 A0A1B0GUA9 196 aa20.37■□□□□ 0.85
MCF2L-230ENST00000491028 SMTNL1A8MU46 457 aa20.37■□□□□ 0.85
MCF2L-230ENST00000491028 CLDN3O15551 220 aa20.37■□□□□ 0.85
MCF2L-230ENST00000491028 NBNO60934 754 aa20.37■□□□□ 0.85
MCF2L-230ENST00000491028 CXCL10P02778 98 aa20.37■□□□□ 0.85
MCF2L-230ENST00000491028 NR3C1P04150 777 aa20.37■□□□□ 0.85
MCF2L-230ENST00000491028 HOXA11P31270 313 aaPredicted RBP20.37■□□□□ 0.85
MCF2L-230ENST00000491028 CCL23P55773 120 aa20.37■□□□□ 0.85
MCF2L-230ENST00000491028 FKBP3Q00688 224 aaKnown RBP20.37■□□□□ 0.85
MCF2L-230ENST00000491028 MCL1Q07820 350 aa20.37■□□□□ 0.85
MCF2L-230ENST00000491028 NFX1Q12986 1120 aaKnown RBP20.37■□□□□ 0.85
MCF2L-230ENST00000491028 HSP90AA2PQ14568 343 aaPredicted RBP20.37■□□□□ 0.85
MCF2L-230ENST00000491028 ZNF568Q3ZCX4 644 aa20.37■□□□□ 0.85
MCF2L-230ENST00000491028 SLC27A1Q6PCB7 646 aa20.37■□□□□ 0.85
MCF2L-230ENST00000491028 ZC3H3Q8IXZ2 948 aaKnown RBP20.37■□□□□ 0.85
MCF2L-230ENST00000491028 APBB2Q92870 758 aa20.37■□□□□ 0.85
MCF2L-230ENST00000491028 CPB2Q96IY4 423 aa20.37■□□□□ 0.85
MCF2L-230ENST00000491028 MED15Q96RN5 788 aa20.37■□□□□ 0.85
MCF2L-230ENST00000491028 ADPGKQ9BRR6 497 aa20.37■□□□□ 0.85
MCF2L-230ENST00000491028 IFIH1Q9BYX4 1025 aaKnown RBP20.37■□□□□ 0.85
MCF2L-230ENST00000491028 PTPRHQ9HD43 1115 aa20.37■□□□□ 0.85
MCF2L-230ENST00000491028 USP20Q9Y2K6 914 aa20.37■□□□□ 0.85
MCF2L-230ENST00000491028 SCN5AQ14524 2016 aa20.37■□□□□ 0.85
MCF2L-230ENST00000491028 LTBP2Q14767 1821 aa20.37■□□□□ 0.85
MCF2L-230ENST00000491028 A0A0B4J269 797 aa20.36■□□□□ 0.85
MCF2L-230ENST00000491028 TISP43B9A030 160 aa20.36■□□□□ 0.85
MCF2L-230ENST00000491028 ABLIM1O14639 778 aa20.36■□□□□ 0.85
MCF2L-230ENST00000491028 FGFR1OPO95684 399 aaKnown RBP20.36■□□□□ 0.85
MCF2L-230ENST00000491028 NR2F2P24468 414 aa20.36■□□□□ 0.85
MCF2L-230ENST00000491028 GPNMBQ14956 572 aa20.36■□□□□ 0.85
MCF2L-230ENST00000491028 NOLC1Q14978 699 aaKnown RBP eCLIP20.36■□□□□ 0.85
MCF2L-230ENST00000491028 TPD52L1Q16890 204 aaPredicted RBP20.36■□□□□ 0.85
MCF2L-230ENST00000491028 DCAF4L1Q3SXM0 396 aa20.36■□□□□ 0.85
MCF2L-230ENST00000491028 PLEKHG4Q58EX7 1191 aa20.36■□□□□ 0.85
MCF2L-230ENST00000491028 SPATA1Q5VX52 437 aa20.36■□□□□ 0.85
MCF2L-230ENST00000491028 C7orf61Q8IZ16 206 aa20.36■□□□□ 0.85
MCF2L-230ENST00000491028 CSGALNACT2Q8N6G5 542 aa20.36■□□□□ 0.85
MCF2L-230ENST00000491028 AOPEPQ8N6M6 819 aa20.36■□□□□ 0.85
MCF2L-230ENST00000491028 NOC3LQ8WTT2 800 aaKnown RBP20.36■□□□□ 0.85
MCF2L-230ENST00000491028 POMGNT1Q8WZA1 660 aa20.36■□□□□ 0.85
MCF2L-230ENST00000491028 SCLYQ96I15 445 aa20.36■□□□□ 0.85
MCF2L-230ENST00000491028 DUSP9Q99956 384 aaKnown RBP20.36■□□□□ 0.85
MCF2L-230ENST00000491028 CBWD1Q9BRT8 395 aa20.36■□□□□ 0.85
MCF2L-230ENST00000491028 TCHPQ9BT92 498 aa20.36■□□□□ 0.85
MCF2L-230ENST00000491028 FTHL17Q9BXU8 183 aa20.36■□□□□ 0.85
MCF2L-230ENST00000491028 OSBPL7Q9BZF2 842 aa20.36■□□□□ 0.85
MCF2L-230ENST00000491028 CBX8Q9HC52 389 aa20.36■□□□□ 0.85
MCF2L-230ENST00000491028 ANKFY1Q9P2R3 1169 aa20.36■□□□□ 0.85
MCF2L-230ENST00000491028 BECN2A8MW95 431 aa20.35■□□□□ 0.85
MCF2L-230ENST00000491028 CETN3O15182 167 aa20.35■□□□□ 0.85
MCF2L-230ENST00000491028 CLIC2O15247 247 aa20.35■□□□□ 0.85
MCF2L-230ENST00000491028 LDHAP00338 332 aaKnown RBP20.35■□□□□ 0.85
MCF2L-230ENST00000491028 MCF2P10911 925 aa20.35■□□□□ 0.85
MCF2L-230ENST00000491028 ADSSP30520 456 aa20.35■□□□□ 0.85
MCF2L-230ENST00000491028 MATR3P43243 847 aaKnown RBP eCLIP20.35■□□□□ 0.85
MCF2L-230ENST00000491028 IQCB1Q15051 598 aa20.35■□□□□ 0.85
MCF2L-230ENST00000491028 EEF1DP3Q658K8 133 aa20.35■□□□□ 0.85
MCF2L-230ENST00000491028 MFSD5Q6N075 450 aa20.35■□□□□ 0.85
MCF2L-230ENST00000491028 TMEM199Q8N511 208 aa20.35■□□□□ 0.85
MCF2L-230ENST00000491028 SEPT8Q92599 483 aa20.35■□□□□ 0.85
MCF2L-230ENST00000491028 CEP63Q96MT8 703 aa20.35■□□□□ 0.85
MCF2L-230ENST00000491028 MSTO1Q9BUK6 570 aa20.35■□□□□ 0.85
MCF2L-230ENST00000491028 CDT1Q9H211 546 aa20.35■□□□□ 0.85
MCF2L-230ENST00000491028 DMAC2Q9NW81 257 aa20.35■□□□□ 0.85
MCF2L-230ENST00000491028 NFE2L3Q9Y4A8 694 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms