RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 ANKRD45Q5TZF3 282 aa5.54□□□□□ -1.52
CSTF1-205ENST00000490539 CST9Q5W186 159 aa5.54□□□□□ -1.52
CSTF1-205ENST00000490539 OTUD7BQ6GQQ9 843 aa5.54□□□□□ -1.52
CSTF1-205ENST00000490539 RGMBQ6NW40 437 aa5.54□□□□□ -1.52
CSTF1-205ENST00000490539 ZC3H14Q6PJT7 736 aaKnown RBP5.54□□□□□ -1.52
CSTF1-205ENST00000490539 LZTR1Q8N653 840 aa5.54□□□□□ -1.52
CSTF1-205ENST00000490539 ZNF513Q8N8E2 541 aaPredicted RBP5.54□□□□□ -1.52
CSTF1-205ENST00000490539 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.54□□□□□ -1.52
CSTF1-205ENST00000490539 FAM151AQ8WW52 585 aa5.54□□□□□ -1.52
CSTF1-205ENST00000490539 MCMBPQ9BTE3 642 aa5.54□□□□□ -1.52
CSTF1-205ENST00000490539 ECHDC1Q9NTX5 307 aa5.54□□□□□ -1.52
CSTF1-205ENST00000490539 CHMP5Q9NZZ3 219 aa5.54□□□□□ -1.52
CSTF1-205ENST00000490539 NUDT5Q9UKK9 219 aa5.54□□□□□ -1.52
CSTF1-205ENST00000490539 MYH13Q9UKX3 1938 aa5.54□□□□□ -1.52
CSTF1-205ENST00000490539 EYSQ5T1H1 3165 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 MROH7-TTC4A0A0A0MT08 1334 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 ASTN2O75129 1339 aaPredicted RBP5.53□□□□□ -1.52
CSTF1-205ENST00000490539 FSD2A1L4K1 749 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 GOLIM4O00461 696 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 ENTPD3O75355 529 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 GLRX3O76003 335 aaKnown RBP5.53□□□□□ -1.52
CSTF1-205ENST00000490539 HLA-DOAP06340 250 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 ZFYP08048 801 aaPredicted RBP5.53□□□□□ -1.52
CSTF1-205ENST00000490539 PLS3P13797 630 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 ATP5JP18859 108 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 SDHBP21912 280 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 VIPR1P32241 457 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 MAPKAPK2P49137 400 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 INHBEP58166 350 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 TCP10Q12799 353 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 PICALMQ13492 652 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 PRKG1Q13976 671 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 RAB33AQ14088 237 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 CBX2Q14781 532 aaPredicted RBP5.53□□□□□ -1.52
CSTF1-205ENST00000490539 KIR3DS1Q14943 382 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 SF3A1Q15459 793 aaKnown RBP5.53□□□□□ -1.52
CSTF1-205ENST00000490539 SLC9C2Q5TAH2 1124 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 E4F1Q66K89 784 aaPredicted RBP5.53□□□□□ -1.52
CSTF1-205ENST00000490539 CYP4F22Q6NT55 531 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 APOBEC3HQ6NTF7 200 aaKnown RBP5.53□□□□□ -1.52
CSTF1-205ENST00000490539 CDC42EP5Q6NZY7 148 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 TMC6Q7Z403 805 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 ZNF227Q86WZ6 799 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 CPNE8Q86YQ8 564 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 SMC5Q8IY18 1101 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 TEX11Q8IYF3 940 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 ANKRD13AQ8IZ07 590 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 COPS5Q92905 334 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 NSUN4Q96CB9 384 aaKnown RBP5.53□□□□□ -1.52
CSTF1-205ENST00000490539 ZBED3Q96IU2 234 aaPredicted RBP5.53□□□□□ -1.52
CSTF1-205ENST00000490539 MRGPRX3Q96LB0 322 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 MMP19Q99542 508 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 ZNF341Q9BYN7 854 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 CRNKL1Q9BZJ0 848 aaKnown RBP5.53□□□□□ -1.52
CSTF1-205ENST00000490539 SLKQ9H2G2 1235 aaPredicted RBP5.53□□□□□ -1.52
CSTF1-205ENST00000490539 DHX36Q9H2U1 1008 aaKnown RBP5.53□□□□□ -1.52
CSTF1-205ENST00000490539 KCNK12Q9HB15 430 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 TNFRSF12AQ9NP84 129 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 PAG1Q9NWQ8 432 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 CLEC1BQ9P126 229 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 TRPM7Q96QT4 1865 aa5.53□□□□□ -1.52
CSTF1-205ENST00000490539 A0A1B0GUL6 1792 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 GAKO14976 1311 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 TTC41PQ6P2S7 1318 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 GPR75-ASB3A0A0A6YYF3 556 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 MYOCOSA0A1B0GUC4 107 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 UBE2Q2LH0YL09 131 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 KLF4O43474 513 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 ZBTB48P10074 688 aaPredicted RBP5.52□□□□□ -1.53
CSTF1-205ENST00000490539 MX1P20591 662 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 TACR1P25103 407 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 GTF2F1P35269 517 aaKnown RBP eCLIP5.52□□□□□ -1.53
CSTF1-205ENST00000490539 ECI1P42126 302 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 GTF2A2P52657 109 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 HSP90AA2PQ14568 343 aaPredicted RBP5.52□□□□□ -1.53
CSTF1-205ENST00000490539 KCNA10Q16322 511 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 ZNF385BQ569K4 471 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 PRAMEF18Q5VWM3 479 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 MAGEB6Q8N7X4 407 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 ST13P5Q8NFI4 369 aaPredicted RBP5.52□□□□□ -1.53
CSTF1-205ENST00000490539 MICAL1Q8TDZ2 1067 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 BTN2A2Q8WVV5 523 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 SNX21Q969T3 373 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 ARMC5Q96C12 935 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 SGSM3Q96HU1 749 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 P2RX7Q99572 595 aaKnown RBP5.52□□□□□ -1.53
CSTF1-205ENST00000490539 IDI2Q9BXS1 227 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 C22orf23Q9BZE7 217 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 TMEM39BQ9GZU3 492 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 BOLA2Q9H3K6 86 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 GPRC5CQ9NQ84 441 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 AATFQ9NY61 560 aaKnown RBP eCLIP5.52□□□□□ -1.53
CSTF1-205ENST00000490539 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.52□□□□□ -1.53
CSTF1-205ENST00000490539 KLHL14Q9P2G3 628 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 CNOT6Q9ULM6 557 aaKnown RBP5.52□□□□□ -1.53
CSTF1-205ENST00000490539 ISY1Q9ULR0 285 aaKnown RBP5.52□□□□□ -1.53
CSTF1-205ENST00000490539 SMG5Q9UPR3 1016 aaKnown RBP5.52□□□□□ -1.53
CSTF1-205ENST00000490539 IRAK3Q9Y616 596 aa5.52□□□□□ -1.53
CSTF1-205ENST00000490539 POLR2AP24928 1970 aaKnown RBP5.52□□□□□ -1.53
CSTF1-205ENST00000490539 AK9Q5TCS8 1911 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms