RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 Q4G0T1 1027 aa9.2□□□□□ -0.94
USP39-216ENST00000490193 ELMSAN1Q6PJG2 1045 aa9.2□□□□□ -0.94
USP39-216ENST00000490193 CATSPER4Q7RTX7 472 aa9.2□□□□□ -0.94
USP39-216ENST00000490193 SLC44A3Q8N4M1 653 aa9.2□□□□□ -0.94
USP39-216ENST00000490193 CCDC148Q8NFR7 591 aa9.2□□□□□ -0.94
USP39-216ENST00000490193 URGCPQ8TCY9 931 aa9.2□□□□□ -0.94
USP39-216ENST00000490193 STAMQ92783 540 aa9.2□□□□□ -0.94
USP39-216ENST00000490193 RMDN1Q96DB5 314 aa9.2□□□□□ -0.94
USP39-216ENST00000490193 CCDC136Q96JN2 1154 aa9.2□□□□□ -0.94
USP39-216ENST00000490193 RPS6KC1Q96S38 1066 aa9.2□□□□□ -0.94
USP39-216ENST00000490193 JPH2Q9BR39 696 aaPredicted RBP9.2□□□□□ -0.94
USP39-216ENST00000490193 HERC2P3Q9BVR0 1158 aa9.2□□□□□ -0.94
USP39-216ENST00000490193 GBP3Q9H0R5 595 aa9.2□□□□□ -0.94
USP39-216ENST00000490193 RSAD1Q9HA92 442 aa9.2□□□□□ -0.94
USP39-216ENST00000490193 IFT122Q9HBG6 1241 aa9.2□□□□□ -0.94
USP39-216ENST00000490193 RXFP1Q9HBX9 757 aa9.2□□□□□ -0.94
USP39-216ENST00000490193 MAN1C1Q9NR34 630 aa9.2□□□□□ -0.94
USP39-216ENST00000490193 KANSL3Q9P2N6 904 aa9.2□□□□□ -0.94
USP39-216ENST00000490193 SUCLA2Q9P2R7 463 aaPredicted RBP9.2□□□□□ -0.94
USP39-216ENST00000490193 SEPT9Q9UHD8 586 aaPredicted RBP9.2□□□□□ -0.94
USP39-216ENST00000490193 SSX2IPQ9Y2D8 614 aa9.2□□□□□ -0.94
USP39-216ENST00000490193 FAN1Q9Y2M0 1017 aa9.2□□□□□ -0.94
USP39-216ENST00000490193 PCDHB2Q9Y5E7 798 aa9.2□□□□□ -0.94
USP39-216ENST00000490193 MYH15Q9Y2K3 1946 aa9.19□□□□□ -0.94
USP39-216ENST00000490193 CYP3A7-CYP3A51PA0A087WV96 503 aa9.19□□□□□ -0.94
USP39-216ENST00000490193 CCDC195A0A1B0GUA6 201 aa9.19□□□□□ -0.94
USP39-216ENST00000490193 TMEM150BA6NC51 233 aa9.19□□□□□ -0.94
USP39-216ENST00000490193 CHMP2AO43633 222 aa9.19□□□□□ -0.94
USP39-216ENST00000490193 URODP06132 367 aa9.19□□□□□ -0.94
USP39-216ENST00000490193 CFHP08603 1231 aa9.19□□□□□ -0.94
USP39-216ENST00000490193 NCLP19338 710 aaKnown RBP9.19□□□□□ -0.94
USP39-216ENST00000490193 CYP3A7P24462 503 aa9.19□□□□□ -0.94
USP39-216ENST00000490193 AFF1P51825 1210 aaKnown RBP9.19□□□□□ -0.94
USP39-216ENST00000490193 PUM1Q14671 1186 aaKnown RBP eCLIP9.19□□□□□ -0.94
USP39-216ENST00000490193 NTRK3Q16288 839 aa9.19□□□□□ -0.94
USP39-216ENST00000490193 LONRF3Q496Y0 759 aa9.19□□□□□ -0.94
USP39-216ENST00000490193 UBXN11Q5T124 520 aa9.19□□□□□ -0.94
USP39-216ENST00000490193 KIAA0319Q5VV43 1072 aa9.19□□□□□ -0.94
USP39-216ENST00000490193 ZC3H14Q6PJT7 736 aaKnown RBP9.19□□□□□ -0.94
USP39-216ENST00000490193 ANO5Q75V66 913 aa9.19□□□□□ -0.94
USP39-216ENST00000490193 MIER3Q7Z3K6 550 aa9.19□□□□□ -0.94
USP39-216ENST00000490193 RHPN2Q8IUC4 686 aa9.19□□□□□ -0.94
USP39-216ENST00000490193 GPR65Q8IYL9 337 aa9.19□□□□□ -0.94
USP39-216ENST00000490193 FBXL16Q8N461 479 aa9.19□□□□□ -0.94
USP39-216ENST00000490193 RSAD2Q8WXG1 361 aa9.19□□□□□ -0.94
USP39-216ENST00000490193 ZNF707Q96C28 371 aaPredicted RBP9.19□□□□□ -0.94
USP39-216ENST00000490193 BORCS6Q96GS4 357 aa9.19□□□□□ -0.94
USP39-216ENST00000490193 MBOAT7Q96N66 472 aa9.19□□□□□ -0.94
USP39-216ENST00000490193 MYADMQ96S97 322 aa9.19□□□□□ -0.94
USP39-216ENST00000490193 RNF26Q9BY78 433 aaPredicted RBP9.19□□□□□ -0.94
USP39-216ENST00000490193 TBC1D17Q9HA65 648 aa9.19□□□□□ -0.94
USP39-216ENST00000490193 UBN1Q9NPG3 1134 aa9.19□□□□□ -0.94
USP39-216ENST00000490193 SLC2A4RGQ9NR83 387 aa9.19□□□□□ -0.94
USP39-216ENST00000490193 MARCH5Q9NX47 278 aa9.19□□□□□ -0.94
USP39-216ENST00000490193 DLL3Q9NYJ7 618 aa9.19□□□□□ -0.94
USP39-216ENST00000490193 ANHXE9PGG2 379 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 TEX28O15482 410 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 GLUD1P00367 558 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 SSBP05455 408 aaKnown RBP eCLIP9.18□□□□□ -0.94
USP39-216ENST00000490193 SP9P0CG40 484 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 HOXA11P31270 313 aaPredicted RBP9.18□□□□□ -0.94
USP39-216ENST00000490193 GBP2P32456 591 aaPredicted RBP9.18□□□□□ -0.94
USP39-216ENST00000490193 GLUD2P49448 558 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 AK2P54819 239 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 DSG1Q02413 1049 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 DSC1Q08554 894 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 MOXD1Q6UVY6 613 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 DGLUCYQ7Z3D6 616 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 SRGAP1Q7Z6B7 1085 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 KSR1Q8IVT5 923 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 EXOC8Q8IYI6 725 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 COLGALT2Q8IYK4 626 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 CNNM3Q8NE01 707 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 ETNPPLQ8TBG4 499 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 KCNG4Q8TDN1 519 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 SMG7Q92540 1137 aaKnown RBP9.18□□□□□ -0.94
USP39-216ENST00000490193 RUBCNQ92622 972 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 KCTD12Q96CX2 325 aaKnown RBP9.18□□□□□ -0.94
USP39-216ENST00000490193 NLRP4Q96MN2 994 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 FAM193BQ96PV7 902 aaPredicted RBP9.18□□□□□ -0.94
USP39-216ENST00000490193 AGXT2Q9BYV1 514 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 C22orf23Q9BZE7 217 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 PLEKHA4Q9H4M7 779 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 DHX33Q9H6R0 707 aaKnown RBP9.18□□□□□ -0.94
USP39-216ENST00000490193 SH3GLB2Q9NR46 395 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 ARHGEF3Q9NR81 526 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 CHST7Q9NS84 486 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 ZDHHC7Q9NXF8 308 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.18□□□□□ -0.94
USP39-216ENST00000490193 CACNA1IQ9P0X4 2223 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 CA14Q9ULX7 337 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 PPME1Q9Y570 386 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 COL4A3BPQ9Y5P4 624 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 NCOR2Q9Y618 2525 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 R4GN57 208 aa9.18□□□□□ -0.94
USP39-216ENST00000490193 STK25O00506 426 aa9.17□□□□□ -0.94
USP39-216ENST00000490193 GAS2O43903 313 aaKnown RBP9.17□□□□□ -0.94
USP39-216ENST00000490193 RFPL2O75678 378 aa9.17□□□□□ -0.94
USP39-216ENST00000490193 POMCP01189 267 aa9.17□□□□□ -0.94
USP39-216ENST00000490193 LAMP2P13473 410 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms