RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 XKR9Q5GH70 373 aa13.13□□□□□ -0.31
FDPS-215ENST00000490140 AGMOQ6ZNB7 445 aa13.13□□□□□ -0.31
FDPS-215ENST00000490140 ZNF280BQ86YH2 543 aa13.13□□□□□ -0.31
FDPS-215ENST00000490140 BCL7CQ8WUZ0 217 aaPredicted RBP13.13□□□□□ -0.31
FDPS-215ENST00000490140 RPS6KC1Q96S38 1066 aa13.13□□□□□ -0.31
FDPS-215ENST00000490140 HERC2P3Q9BVR0 1158 aa13.13□□□□□ -0.31
FDPS-215ENST00000490140 MAN1C1Q9NR34 630 aa13.13□□□□□ -0.31
FDPS-215ENST00000490140 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.13□□□□□ -0.319e-7■■■□□ 17.8
FDPS-215ENST00000490140 VAV3Q9UKW4 847 aa13.13□□□□□ -0.31
FDPS-215ENST00000490140 PRR23AA6NEV1 266 aa13.12□□□□□ -0.31
FDPS-215ENST00000490140 MEIS3P2A8K0S8 358 aa13.12□□□□□ -0.31
FDPS-215ENST00000490140 NRP1O14786 923 aa13.12□□□□□ -0.31
FDPS-215ENST00000490140 POMCP01189 267 aa13.12□□□□□ -0.31
FDPS-215ENST00000490140 GBP2P32456 591 aaPredicted RBP13.12□□□□□ -0.31
FDPS-215ENST00000490140 OR1G1P47890 313 aa13.12□□□□□ -0.31
FDPS-215ENST00000490140 NPEPPSP55786 919 aa13.12□□□□□ -0.31
FDPS-215ENST00000490140 POU5F1BQ06416 359 aa13.12□□□□□ -0.31
FDPS-215ENST00000490140 FERMT3Q86UX7 667 aa13.12□□□□□ -0.31
FDPS-215ENST00000490140 GPR65Q8IYL9 337 aa13.12□□□□□ -0.31
FDPS-215ENST00000490140 TMEM143Q96AN5 459 aa13.12□□□□□ -0.31
FDPS-215ENST00000490140 COLEC11Q9BWP8 271 aa13.12□□□□□ -0.31
FDPS-215ENST00000490140 PLEKHA4Q9H4M7 779 aa13.12□□□□□ -0.31
FDPS-215ENST00000490140 KCNK12Q9HB15 430 aa13.12□□□□□ -0.31
FDPS-215ENST00000490140 DAXXQ9UER7 740 aaPredicted RBP13.12□□□□□ -0.31
FDPS-215ENST00000490140 PRG3Q9Y2Y8 225 aaPredicted RBP13.12□□□□□ -0.31
FDPS-215ENST00000490140 GVINP1Q7Z2Y8 2422 aa13.12□□□□□ -0.31
FDPS-215ENST00000490140 PLXNA3P51805 1871 aa13.12□□□□□ -0.31
FDPS-215ENST00000490140 CLUHO75153 1309 aa13.12□□□□□ -0.31
FDPS-215ENST00000490140 ARID2Q68CP9 1835 aa13.11□□□□□ -0.31
FDPS-215ENST00000490140 C2orf16Q68DN1 1984 aa13.11□□□□□ -0.31
FDPS-215ENST00000490140 ARL5CA6NH57 179 aa13.11□□□□□ -0.31
FDPS-215ENST00000490140 INO80B-WBP1J3KQ70 363 aa13.11□□□□□ -0.31
FDPS-215ENST00000490140 EML1O00423 815 aa13.11□□□□□ -0.31
FDPS-215ENST00000490140 C2CD2LO14523 706 aa13.11□□□□□ -0.31
FDPS-215ENST00000490140 INPPL1O15357 1258 aa13.11□□□□□ -0.31
FDPS-215ENST00000490140 DGAT1O75907 488 aa13.11□□□□□ -0.31
FDPS-215ENST00000490140 DDHD2O94830 711 aa13.11□□□□□ -0.31
FDPS-215ENST00000490140 HOXA11P31270 313 aaPredicted RBP13.11□□□□□ -0.31
FDPS-215ENST00000490140 STK3Q13188 491 aa13.11□□□□□ -0.31
FDPS-215ENST00000490140 NCAPH2Q6IBW4 605 aa13.11□□□□□ -0.31
FDPS-215ENST00000490140 SKAP1Q86WV1 359 aa13.11□□□□□ -0.31
FDPS-215ENST00000490140 CCDC105Q8IYK2 499 aa13.11□□□□□ -0.31
FDPS-215ENST00000490140 PHF20Q9BVI0 1012 aa13.11□□□□□ -0.31
FDPS-215ENST00000490140 VN1R3Q9BXE9 311 aa13.11□□□□□ -0.31
FDPS-215ENST00000490140 SEMA4AQ9H3S1 761 aa13.11□□□□□ -0.31
FDPS-215ENST00000490140 PIDD1Q9HB75 910 aa13.11□□□□□ -0.31
FDPS-215ENST00000490140 WDR6Q9NNW5 1121 aaKnown RBP13.11□□□□□ -0.31
FDPS-215ENST00000490140 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.11□□□□□ -0.31
FDPS-215ENST00000490140 GIT1Q9Y2X7 761 aa13.11□□□□□ -0.31
FDPS-215ENST00000490140 IPPQ9Y573 584 aa13.11□□□□□ -0.31
FDPS-215ENST00000490140 TDRD15B5MCY1 1934 aaKnown RBP13.11□□□□□ -0.31
FDPS-215ENST00000490140 STK25O00506 426 aa13.1□□□□□ -0.31
FDPS-215ENST00000490140 TEX28O15482 410 aa13.1□□□□□ -0.31
FDPS-215ENST00000490140 TSPAN1O60635 241 aa13.1□□□□□ -0.31
FDPS-215ENST00000490140 MLH1P40692 756 aa13.1□□□□□ -0.31
FDPS-215ENST00000490140 PTENP60484 403 aa13.1□□□□□ -0.31
FDPS-215ENST00000490140 NPY5RQ15761 445 aa13.1□□□□□ -0.31
FDPS-215ENST00000490140 USP41Q3LFD5 358 aa13.1□□□□□ -0.31
FDPS-215ENST00000490140 UBXN11Q5T124 520 aa13.1□□□□□ -0.31
FDPS-215ENST00000490140 CWF19L1Q69YN2 538 aaKnown RBP13.1□□□□□ -0.31
FDPS-215ENST00000490140 ZC3H14Q6PJT7 736 aaKnown RBP13.1□□□□□ -0.31
FDPS-215ENST00000490140 PIK3AP1Q6ZUJ8 805 aa13.1□□□□□ -0.31
FDPS-215ENST00000490140 COLGALT2Q8IYK4 626 aa13.1□□□□□ -0.31
FDPS-215ENST00000490140 SIX5Q8N196 739 aa13.1□□□□□ -0.31
FDPS-215ENST00000490140 SMG7Q92540 1137 aaKnown RBP13.1□□□□□ -0.31
FDPS-215ENST00000490140 NFKBIZQ9BYH8 718 aa13.1□□□□□ -0.31
FDPS-215ENST00000490140 CSRNP2Q9H175 543 aa13.1□□□□□ -0.31
FDPS-215ENST00000490140 MINDY3Q9H8M7 445 aa13.1□□□□□ -0.31
FDPS-215ENST00000490140 PDRG1Q9NUG6 133 aa13.1□□□□□ -0.31
FDPS-215ENST00000490140 ZDHHC7Q9NXF8 308 aa13.1□□□□□ -0.31
FDPS-215ENST00000490140 EPS15L1Q9UBC2 864 aa13.1□□□□□ -0.31
FDPS-215ENST00000490140 WNT16Q9UBV4 365 aa13.1□□□□□ -0.31
FDPS-215ENST00000490140 KCNJ14Q9UNX9 436 aa13.1□□□□□ -0.31
FDPS-215ENST00000490140 ZFP37Q9Y6Q3 630 aaPredicted RBP13.1□□□□□ -0.31
FDPS-215ENST00000490140 CCDC195A0A1B0GUA6 201 aa13.09□□□□□ -0.31
FDPS-215ENST00000490140 LILRB3O75022 631 aa13.09□□□□□ -0.31
FDPS-215ENST00000490140 DSG1Q02413 1049 aa13.09□□□□□ -0.31
FDPS-215ENST00000490140 CYP4A11Q02928 519 aa13.09□□□□□ -0.31
FDPS-215ENST00000490140 DSC1Q08554 894 aa13.09□□□□□ -0.31
FDPS-215ENST00000490140 GRIK3Q13003 919 aa13.09□□□□□ -0.31
FDPS-215ENST00000490140 ANKRD1Q15327 319 aa13.09□□□□□ -0.31
FDPS-215ENST00000490140 KANK3Q6NY19 840 aa13.09□□□□□ -0.31
FDPS-215ENST00000490140 SLC27A1Q6PCB7 646 aa13.09□□□□□ -0.31
FDPS-215ENST00000490140 ASCL5Q7RTU5 278 aa13.09□□□□□ -0.31
FDPS-215ENST00000490140 FRMD5Q7Z6J6 570 aa13.09□□□□□ -0.31
FDPS-215ENST00000490140 POTEDQ86YR6 584 aa13.09□□□□□ -0.31
FDPS-215ENST00000490140 IFNLR1Q8IU57 520 aaPredicted RBP13.09□□□□□ -0.31
FDPS-215ENST00000490140 TPH2Q8IWU9 490 aa13.09□□□□□ -0.31
FDPS-215ENST00000490140 SMG8Q8ND04 991 aaKnown RBP13.09□□□□□ -0.31
FDPS-215ENST00000490140 AIFM3Q96NN9 605 aa13.09□□□□□ -0.31
FDPS-215ENST00000490140 GAD1Q99259 594 aa13.09□□□□□ -0.31
FDPS-215ENST00000490140 SMOC2Q9H3U7 446 aa13.09□□□□□ -0.31
FDPS-215ENST00000490140 RXFP1Q9HBX9 757 aa13.09□□□□□ -0.31
FDPS-215ENST00000490140 BMP2KQ9NSY1 1161 aaPredicted RBP13.09□□□□□ -0.31
FDPS-215ENST00000490140 ANKEF1Q9NU02 776 aa13.09□□□□□ -0.31
FDPS-215ENST00000490140 MARCH5Q9NX47 278 aa13.09□□□□□ -0.31
FDPS-215ENST00000490140 SF3B1O75533 1304 aaKnown RBP eCLIP13.09□□□□□ -0.314e-6■■■■■ 34.5
FDPS-215ENST00000490140 B4GALT3O60512 393 aa13.08□□□□□ -0.32
FDPS-215ENST00000490140 LYPLA2O95372 231 aa13.08□□□□□ -0.32
FDPS-215ENST00000490140 SRFP11831 508 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms